RNA–Protein interactions for RNA: ENST00000576952.1

POLR2A-208, Transcript of RNA polymerase II subunit A, humanhuman

TSL 2

Gene POLR2A, Length 532 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-208ENST00000576952 KIAA0586Q9BVV6 1533 aa25.85■■□□□ 1.73
POLR2A-208ENST00000576952 JPH4Q96JJ6 628 aa25.84■■□□□ 1.73
POLR2A-208ENST00000576952 PRG4Q92954 1404 aaPredicted RBP25.83■■□□□ 1.73
POLR2A-208ENST00000576952 RAPGEF2Q9Y4G8 1499 aa25.83■■□□□ 1.73
POLR2A-208ENST00000576952 IQGAP2Q13576 1575 aa25.76■■□□□ 1.71
POLR2A-208ENST00000576952 CTTNBP2Q8WZ74 1663 aa25.76■■□□□ 1.71
POLR2A-208ENST00000576952 CHIC1Q5VXU3 224 aa25.75■■□□□ 1.71
POLR2A-208ENST00000576952 PRXQ9BXM0 1461 aa25.72■■□□□ 1.71
POLR2A-208ENST00000576952 CSRNP3Q8WYN3 585 aa25.65■■□□□ 1.7
POLR2A-208ENST00000576952 EEA1Q15075 1411 aa25.64■■□□□ 1.7
POLR2A-208ENST00000576952 FAM9AQ8IZU1 332 aaPredicted RBP25.61■■□□□ 1.69
POLR2A-208ENST00000576952 UGGT2Q9NYU1 1516 aa25.58■■□□□ 1.69
POLR2A-208ENST00000576952 DISP1Q96F81 1524 aa25.56■■□□□ 1.68
POLR2A-208ENST00000576952 CARMIL2Q6F5E8 1435 aa25.55■■□□□ 1.68
POLR2A-208ENST00000576952 ADCY10Q96PN6 1610 aa25.53■■□□□ 1.68
POLR2A-208ENST00000576952 KIAA0556O60303 1618 aa25.52■■□□□ 1.68
POLR2A-208ENST00000576952 TRHP20396 242 aaPredicted RBP25.51■■□□□ 1.67
POLR2A-208ENST00000576952 TTBK1Q5TCY1 1321 aaPredicted RBP25.5■■□□□ 1.67
POLR2A-208ENST00000576952 KIF21BO75037 1637 aa25.49■■□□□ 1.67
POLR2A-208ENST00000576952 TNIKQ9UKE5 1360 aa25.49■■□□□ 1.67
POLR2A-208ENST00000576952 PTPRGP23470 1445 aa25.48■■□□□ 1.67
POLR2A-208ENST00000576952 KIF13AQ9H1H9 1805 aa25.4■■□□□ 1.66
POLR2A-208ENST00000576952 GOLGA3Q08378 1498 aa25.39■■□□□ 1.65
POLR2A-208ENST00000576952 NPM1P06748 294 aaKnown RBP eCLIP25.34■■□□□ 1.65
POLR2A-208ENST00000576952 SAMD9Q5K651 1589 aa25.33■■□□□ 1.65
POLR2A-208ENST00000576952 EHMT2Q96KQ7 1210 aa25.32■■□□□ 1.64
POLR2A-208ENST00000576952 MAPKBP1O60336 1514 aa25.32■■□□□ 1.64
POLR2A-208ENST00000576952 UACAQ9BZF9 1416 aa25.31■■□□□ 1.64
POLR2A-208ENST00000576952 ABCC2Q92887 1545 aa25.31■■□□□ 1.64
POLR2A-208ENST00000576952 UHRF1BP1LA0JNW5 1464 aa25.3■■□□□ 1.64
POLR2A-208ENST00000576952 P3H3Q8IVL6 736 aa25.27■■□□□ 1.64
POLR2A-208ENST00000576952 RANGAP1P46060 587 aaPredicted RBP25.25■■□□□ 1.63
POLR2A-208ENST00000576952 PLB1Q6P1J6 1458 aa25.25■■□□□ 1.63
POLR2A-208ENST00000576952 ZCCHC11Q5TAX3 1644 aaKnown RBP25.25■■□□□ 1.63
POLR2A-208ENST00000576952 ABCA8O94911 1581 aa25.23■■□□□ 1.63
POLR2A-208ENST00000576952 DIP2BQ9P265 1576 aa25.22■■□□□ 1.63
POLR2A-208ENST00000576952 UBTFP17480 764 aaKnown RBP25.21■■□□□ 1.63
POLR2A-208ENST00000576952 KDM5BQ9UGL1 1544 aa25.2■■□□□ 1.62
POLR2A-208ENST00000576952 ABCC10Q5T3U5 1492 aa25.2■■□□□ 1.62
POLR2A-208ENST00000576952 TSPOAP1O95153 1857 aa25.17■■□□□ 1.62
POLR2A-208ENST00000576952 ASXL2Q76L83 1435 aa25.15■■□□□ 1.62
POLR2A-208ENST00000576952 EFCAB5A4FU69 1503 aa25.14■■□□□ 1.62
POLR2A-208ENST00000576952 FAM69CQ0P6D2 419 aa25.14■■□□□ 1.62
POLR2A-208ENST00000576952 FHOD3Q2V2M9 1422 aa25.13■■□□□ 1.61
POLR2A-208ENST00000576952 RAPGEF6Q8TEU7 1601 aa25.12■■□□□ 1.61
POLR2A-208ENST00000576952 ARHGAP35Q9NRY4 1499 aa25.02■■□□□ 1.6
POLR2A-208ENST00000576952 GLI2P10070 1586 aa25.02■■□□□ 1.6
POLR2A-208ENST00000576952 ARID3CA6NKF2 412 aa25.02■■□□□ 1.6
POLR2A-208ENST00000576952 WDR7Q9Y4E6 1490 aa25■■□□□ 1.59
POLR2A-208ENST00000576952 EPRSP07814 1512 aaKnown RBP25■■□□□ 1.59
POLR2A-208ENST00000576952 ATP10BO94823 1461 aa24.99■■□□□ 1.59
POLR2A-208ENST00000576952 PPRC1Q5VV67 1664 aaKnown RBP24.99■■□□□ 1.59
POLR2A-208ENST00000576952 MAP3K4Q9Y6R4 1608 aa24.97■■□□□ 1.59
POLR2A-208ENST00000576952 NUP153P49790 1475 aaKnown RBP24.97■■□□□ 1.59
POLR2A-208ENST00000576952 CFAP43Q8NDM7 1665 aa24.9■■□□□ 1.58
POLR2A-208ENST00000576952 KCNH8Q96L42 1107 aa24.88■■□□□ 1.57
POLR2A-208ENST00000576952 FMN1Q68DA7 1419 aa24.87■■□□□ 1.57
POLR2A-208ENST00000576952 LRRIQ1Q96JM4 1722 aa24.87■■□□□ 1.57
POLR2A-208ENST00000576952 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.87■■□□□ 1.57
POLR2A-208ENST00000576952 HNRNPUL2Q1KMD3 747 aaKnown RBP24.87■■□□□ 1.57
POLR2A-208ENST00000576952 HECW1Q76N89 1606 aa24.86■■□□□ 1.57
POLR2A-208ENST00000576952 KDM6BO15054 1643 aa24.85■■□□□ 1.57
POLR2A-208ENST00000576952 CDK13Q14004 1512 aaKnown RBP24.83■■□□□ 1.57
POLR2A-208ENST00000576952 CLIP1P30622 1438 aa24.81■■□□□ 1.56
POLR2A-208ENST00000576952 ABCA9Q8IUA7 1624 aa24.79■■□□□ 1.56
POLR2A-208ENST00000576952 ATP1B4Q9UN42 357 aaPredicted RBP24.79■■□□□ 1.56
POLR2A-208ENST00000576952 PCF11O94913 1555 aaKnown RBP24.78■■□□□ 1.56
POLR2A-208ENST00000576952 CD109Q6YHK3 1445 aa24.77■■□□□ 1.56
POLR2A-208ENST00000576952 TEX14Q8IWB6 1497 aa24.76■■□□□ 1.55
POLR2A-208ENST00000576952 MAGI3Q5TCQ9 1506 aa24.73■■□□□ 1.55
POLR2A-208ENST00000576952 LOC105371045A0A1W2PR82 267 aa24.73■■□□□ 1.55
POLR2A-208ENST00000576952 PLEKHD1A6NEE1 506 aa24.72■■□□□ 1.55
POLR2A-208ENST00000576952 CEP162Q5TB80 1403 aa24.69■■□□□ 1.54
POLR2A-208ENST00000576952 CASKIN1Q8WXD9 1431 aa24.69■■□□□ 1.54
POLR2A-208ENST00000576952 COL17A1Q9UMD9 1497 aaPredicted RBP24.67■■□□□ 1.54
POLR2A-208ENST00000576952 TTC37Q6PGP7 1564 aa24.66■■□□□ 1.54
POLR2A-208ENST00000576952 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.66■■□□□ 1.54
POLR2A-208ENST00000576952 FYCO1Q9BQS8 1478 aa24.64■■□□□ 1.53
POLR2A-208ENST00000576952 KIF14Q15058 1648 aa24.61■■□□□ 1.53
POLR2A-208ENST00000576952 CCDC18Q5T9S5 1454 aa24.61■■□□□ 1.53
POLR2A-208ENST00000576952 CDK11AQ9UQ88 783 aaPredicted RBP24.58■■□□□ 1.53
POLR2A-208ENST00000576952 MYO5CQ9NQX4 1742 aa24.58■■□□□ 1.52
POLR2A-208ENST00000576952 TROQ12816 1431 aaPredicted RBP24.55■■□□□ 1.52
POLR2A-208ENST00000576952 NEO1Q92859 1461 aa24.52■■□□□ 1.52
POLR2A-208ENST00000576952 ARAP3Q8WWN8 1544 aa24.52■■□□□ 1.52
POLR2A-208ENST00000576952 CFAP74Q9C0B2 1584 aa24.52■■□□□ 1.52
POLR2A-208ENST00000576952 FANCAO15360 1455 aa24.48■■□□□ 1.51
POLR2A-208ENST00000576952 CDC42BPBQ9Y5S2 1711 aa24.47■■□□□ 1.51
POLR2A-208ENST00000576952 PHLDB1Q86UU1 1377 aa24.47■■□□□ 1.51
POLR2A-208ENST00000576952 CDC42BPAQ5VT25 1732 aa24.45■■□□□ 1.5
POLR2A-208ENST00000576952 RICTORQ6R327 1708 aa24.45■■□□□ 1.5
POLR2A-208ENST00000576952 PLCH2O75038 1416 aa24.44■■□□□ 1.5
POLR2A-208ENST00000576952 FRMPD1Q5SYB0 1578 aa24.44■■□□□ 1.5
POLR2A-208ENST00000576952 AKNAQ7Z591 1439 aa24.44■■□□□ 1.5
POLR2A-208ENST00000576952 PREX2Q70Z35 1606 aa24.41■■□□□ 1.5
POLR2A-208ENST00000576952 RAPGEF3O95398 923 aa24.4■■□□□ 1.5
POLR2A-208ENST00000576952 VPS8Q8N3P4 1428 aa24.39■■□□□ 1.5
POLR2A-208ENST00000576952 ARHGAP5Q13017 1502 aa24.38■■□□□ 1.49
POLR2A-208ENST00000576952 DENND4BO75064 1496 aaPredicted RBP24.36■■□□□ 1.49
POLR2A-208ENST00000576952 ADGRL1O94910 1474 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms