RNA–Protein interactions for RNA: ENST00000576377.1

SLC12A4-216, Transcript of solute carrier family 12 member 4, humanhuman

TSL 5

Gene SLC12A4, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-216ENST00000576377 GRIN2AQ12879 1464 aa28.44■■■□□ 2.14
SLC12A4-216ENST00000576377 NUP160Q12769 1436 aa28.41■■■□□ 2.14
SLC12A4-216ENST00000576377 CUX1P39880 1505 aa28.32■■■□□ 2.12
SLC12A4-216ENST00000576377 ABCA5Q8WWZ7 1642 aa28.32■■■□□ 2.12
SLC12A4-216ENST00000576377 ADCY10Q96PN6 1610 aa28.29■■■□□ 2.12
SLC12A4-216ENST00000576377 PRG4Q92954 1404 aaPredicted RBP28.26■■■□□ 2.12
SLC12A4-216ENST00000576377 NPM1P06748 294 aaKnown RBP eCLIP28.26■■■□□ 2.11
SLC12A4-216ENST00000576377 ADAMTS12P58397 1594 aa28.24■■■□□ 2.11
SLC12A4-216ENST00000576377 PPRC1Q5VV67 1664 aaKnown RBP28.19■■■□□ 2.1
SLC12A4-216ENST00000576377 DISP3Q9P2K9 1392 aa28.18■■■□□ 2.1
SLC12A4-216ENST00000576377 ABCA10Q8WWZ4 1543 aa28.13■■■□□ 2.09
SLC12A4-216ENST00000576377 COL17A1Q9UMD9 1497 aaPredicted RBP28.12■■■□□ 2.09
SLC12A4-216ENST00000576377 JPH4Q96JJ6 628 aa28.02■■■□□ 2.08
SLC12A4-216ENST00000576377 TOP2BQ02880 1626 aa28.02■■■□□ 2.08
SLC12A4-216ENST00000576377 FHAD1B1AJZ9 1412 aa27.98■■■□□ 2.07
SLC12A4-216ENST00000576377 RUSC2Q8N2Y8 1516 aa27.9■■■□□ 2.06
SLC12A4-216ENST00000576377 GLI2P10070 1586 aa27.9■■■□□ 2.06
SLC12A4-216ENST00000576377 SPATA31D1Q6ZQQ2 1576 aa27.86■■■□□ 2.05
SLC12A4-216ENST00000576377 ASXL2Q76L83 1435 aa27.79■■■□□ 2.04
SLC12A4-216ENST00000576377 MAP3K4Q9Y6R4 1608 aa27.74■■■□□ 2.03
SLC12A4-216ENST00000576377 PLB1Q6P1J6 1458 aa27.71■■■□□ 2.03
SLC12A4-216ENST00000576377 KIF21BO75037 1637 aa27.71■■■□□ 2.03
SLC12A4-216ENST00000576377 ERICH3Q5RHP9 1530 aa27.71■■■□□ 2.03
SLC12A4-216ENST00000576377 CERKQ8TCT0 537 aa27.7■■■□□ 2.02
SLC12A4-216ENST00000576377 PCF11O94913 1555 aaKnown RBP27.69■■■□□ 2.02
SLC12A4-216ENST00000576377 TEX14Q8IWB6 1497 aa27.68■■■□□ 2.02
SLC12A4-216ENST00000576377 ABCC2Q92887 1545 aa27.67■■■□□ 2.02
SLC12A4-216ENST00000576377 PTPRMP28827 1452 aa27.66■■■□□ 2.02
SLC12A4-216ENST00000576377 CUL7Q14999 1698 aa27.64■■■□□ 2.02
SLC12A4-216ENST00000576377 EPRSP07814 1512 aaKnown RBP27.62■■■□□ 2.01
SLC12A4-216ENST00000576377 WRNQ14191 1432 aaPredicted RBP eCLIP27.59■■■□□ 2.01
SLC12A4-216ENST00000576377 ADAMTSL3P82987 1691 aa27.55■■■□□ 2
SLC12A4-216ENST00000576377 PTPRGP23470 1445 aa27.53■■■□□ 2
SLC12A4-216ENST00000576377 TTBK1Q5TCY1 1321 aaPredicted RBP27.52■■■□□ 2
SLC12A4-216ENST00000576377 KIAA0586Q9BVV6 1533 aa27.46■■□□□ 1.99
SLC12A4-216ENST00000576377 HSPA2P54652 639 aa27.44■■□□□ 1.98
SLC12A4-216ENST00000576377 UHRF1BP1LA0JNW5 1464 aa27.38■■□□□ 1.97
SLC12A4-216ENST00000576377 MADDQ8WXG6 1647 aa27.37■■□□□ 1.97
SLC12A4-216ENST00000576377 BIVM-ERCC5R4GMW8 1640 aa27.35■■□□□ 1.97
SLC12A4-216ENST00000576377 TNIKQ9UKE5 1360 aa27.33■■□□□ 1.97
SLC12A4-216ENST00000576377 KDM5BQ9UGL1 1544 aa27.31■■□□□ 1.96
SLC12A4-216ENST00000576377 ZCCHC11Q5TAX3 1644 aaKnown RBP27.31■■□□□ 1.96
SLC12A4-216ENST00000576377 BCORL1Q5H9F3 1711 aa27.29■■□□□ 1.96
SLC12A4-216ENST00000576377 UACAQ9BZF9 1416 aa27.28■■□□□ 1.96
SLC12A4-216ENST00000576377 MAGI3Q5TCQ9 1506 aa27.27■■□□□ 1.96
SLC12A4-216ENST00000576377 RIMS1Q86UR5 1692 aaKnown RBP27.21■■□□□ 1.95
SLC12A4-216ENST00000576377 WDR7Q9Y4E6 1490 aa27.2■■□□□ 1.95
SLC12A4-216ENST00000576377 CD109Q6YHK3 1445 aa27.2■■□□□ 1.94
SLC12A4-216ENST00000576377 CFAP43Q8NDM7 1665 aa27.2■■□□□ 1.94
SLC12A4-216ENST00000576377 CARMIL2Q6F5E8 1435 aa27.17■■□□□ 1.94
SLC12A4-216ENST00000576377 ARAP3Q8WWN8 1544 aa27.11■■□□□ 1.93
SLC12A4-216ENST00000576377 PLPPR3Q6T4P5 718 aa27.07■■□□□ 1.92
SLC12A4-216ENST00000576377 ARID4BQ4LE39 1312 aaPredicted RBP27.03■■□□□ 1.92
SLC12A4-216ENST00000576377 DISP1Q96F81 1524 aa27.02■■□□□ 1.92
SLC12A4-216ENST00000576377 KCNH8Q96L42 1107 aa26.97■■□□□ 1.91
SLC12A4-216ENST00000576377 IQGAP2Q13576 1575 aa26.97■■□□□ 1.91
SLC12A4-216ENST00000576377 STRCQ7RTU9 1775 aa26.96■■□□□ 1.91
SLC12A4-216ENST00000576377 RAPGEF3O95398 923 aa26.92■■□□□ 1.9
SLC12A4-216ENST00000576377 IGF1RP08069 1367 aa26.92■■□□□ 1.9
SLC12A4-216ENST00000576377 FRMPD1Q5SYB0 1578 aa26.92■■□□□ 1.9
SLC12A4-216ENST00000576377 YEATS2Q9ULM3 1422 aa26.89■■□□□ 1.89
SLC12A4-216ENST00000576377 LTBP4Q8N2S1 1624 aa26.84■■□□□ 1.89
SLC12A4-216ENST00000576377 ARHGEF40Q8TER5 1519 aa26.83■■□□□ 1.89
SLC12A4-216ENST00000576377 MED1Q15648 1581 aaPredicted RBP26.81■■□□□ 1.88
SLC12A4-216ENST00000576377 PREX1Q8TCU6 1659 aa26.81■■□□□ 1.88
SLC12A4-216ENST00000576377 DMRT2Q9Y5R5 561 aa26.79■■□□□ 1.88
SLC12A4-216ENST00000576377 IQSEC2Q5JU85 1478 aa26.79■■□□□ 1.88
SLC12A4-216ENST00000576377 KIAA0556O60303 1618 aa26.79■■□□□ 1.88
SLC12A4-216ENST00000576377 SIGLEC1Q9BZZ2 1709 aa26.79■■□□□ 1.88
SLC12A4-216ENST00000576377 TTC37Q6PGP7 1564 aa26.75■■□□□ 1.87
SLC12A4-216ENST00000576377 FER1L4A9Z1Z3 1794 aa26.74■■□□□ 1.87
SLC12A4-216ENST00000576377 PHLDB1Q86UU1 1377 aa26.72■■□□□ 1.87
SLC12A4-216ENST00000576377 UGGT2Q9NYU1 1516 aa26.72■■□□□ 1.87
SLC12A4-216ENST00000576377 PTPRTO14522 1441 aa26.68■■□□□ 1.86
SLC12A4-216ENST00000576377 CARMIL1Q5VZK9 1371 aa26.68■■□□□ 1.86
SLC12A4-216ENST00000576377 FANCAO15360 1455 aa26.66■■□□□ 1.86
SLC12A4-216ENST00000576377 KIF27Q86VH2 1401 aa26.65■■□□□ 1.86
SLC12A4-216ENST00000576377 ABCA9Q8IUA7 1624 aa26.65■■□□□ 1.86
SLC12A4-216ENST00000576377 NEO1Q92859 1461 aa26.65■■□□□ 1.86
SLC12A4-216ENST00000576377 ABCA8O94911 1581 aa26.65■■□□□ 1.86
SLC12A4-216ENST00000576377 POGZQ7Z3K3 1410 aa26.65■■□□□ 1.86
SLC12A4-216ENST00000576377 MLECQ14165 292 aa26.61■■□□□ 1.85
SLC12A4-216ENST00000576377 UBAP1LF5GYI3 381 aa26.59■■□□□ 1.85
SLC12A4-216ENST00000576377 RICTORQ6R327 1708 aa26.59■■□□□ 1.85
SLC12A4-216ENST00000576377 CEBPAP49715 358 aaPredicted RBP26.54■■□□□ 1.84
SLC12A4-216ENST00000576377 AKNAQ7Z591 1439 aa26.54■■□□□ 1.84
SLC12A4-216ENST00000576377 UHRF1BP1Q6BDS2 1440 aa26.53■■□□□ 1.84
SLC12A4-216ENST00000576377 ARHGEF12Q9NZN5 1544 aa26.49■■□□□ 1.83
SLC12A4-216ENST00000576377 ARID3CA6NKF2 412 aa26.47■■□□□ 1.83
SLC12A4-216ENST00000576377 ZFYVE16Q7Z3T8 1539 aa26.47■■□□□ 1.83
SLC12A4-216ENST00000576377 DENND4BO75064 1496 aaPredicted RBP26.47■■□□□ 1.83
SLC12A4-216ENST00000576377 HSPA1LP34931 641 aa26.46■■□□□ 1.83
SLC12A4-216ENST00000576377 PHF23Q9BUL5 403 aaPredicted RBP26.45■■□□□ 1.82
SLC12A4-216ENST00000576377 FHOD3Q2V2M9 1422 aa26.44■■□□□ 1.82
SLC12A4-216ENST00000576377 ZMYM4Q5VZL5 1548 aa26.44■■□□□ 1.82
SLC12A4-216ENST00000576377 EFCAB5A4FU69 1503 aa26.41■■□□□ 1.82
SLC12A4-216ENST00000576377 ATP10BO94823 1461 aa26.39■■□□□ 1.82
SLC12A4-216ENST00000576377 SETD1BQ9UPS6 1966 aaKnown RBP26.38■■□□□ 1.81
SLC12A4-216ENST00000576377 NCOA1Q15788 1441 aa26.37■■□□□ 1.81
SLC12A4-216ENST00000576377 ZNF335Q9H4Z2 1342 aaPredicted RBP26.37■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms