RNA–Protein interactions for RNA: ENST00000575919.1

SLC52A1-205, Transcript of solute carrier family 52 member 1, humanhuman

TSL 5

Gene SLC52A1, Length 2,385 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1-205ENST00000575919 ZEB1P37275 1124 aaPredicted RBP22.81■■□□□ 1.24
SLC52A1-205ENST00000575919 CCER1Q8TC90 406 aaPredicted RBP22.81■■□□□ 1.24
SLC52A1-205ENST00000575919 ATP1B4Q9UN42 357 aaPredicted RBP22.79■■□□□ 1.24
SLC52A1-205ENST00000575919 WDR62O43379 1518 aa22.78■■□□□ 1.24
SLC52A1-205ENST00000575919 ZNF608Q9ULD9 1512 aaPredicted RBP22.77■■□□□ 1.24
SLC52A1-205ENST00000575919 FHOD3Q2V2M9 1422 aa22.76■■□□□ 1.23
SLC52A1-205ENST00000575919 CTTNBP2Q8WZ74 1663 aa22.75■■□□□ 1.23
SLC52A1-205ENST00000575919 PBRM1Q86U86 1689 aa22.73■■□□□ 1.23
SLC52A1-205ENST00000575919 IFT140Q96RY7 1462 aa22.72■■□□□ 1.23
SLC52A1-205ENST00000575919 GRIN2BQ13224 1484 aa22.67■■□□□ 1.22
SLC52A1-205ENST00000575919 FHAD1B1AJZ9 1412 aa22.66■■□□□ 1.22
SLC52A1-205ENST00000575919 THOC2Q8NI27 1593 aaKnown RBP22.65■■□□□ 1.22
SLC52A1-205ENST00000575919 EFCAB5A4FU69 1503 aa22.63■■□□□ 1.21
SLC52A1-205ENST00000575919 PCF11O94913 1555 aaKnown RBP22.62■■□□□ 1.21
SLC52A1-205ENST00000575919 ADAMTS12P58397 1594 aa22.61■■□□□ 1.21
SLC52A1-205ENST00000575919 TIAM1Q13009 1591 aa22.6■■□□□ 1.21
SLC52A1-205ENST00000575919 EIF4G3O43432 1585 aaKnown RBP22.57■■□□□ 1.2
SLC52A1-205ENST00000575919 SNAPC4Q5SXM2 1469 aa22.56■■□□□ 1.2
SLC52A1-205ENST00000575919 SCAF1Q9H7N4 1312 aaKnown RBP22.54■■□□□ 1.2
SLC52A1-205ENST00000575919 LRRC9Q6ZRR7 1453 aa22.53■■□□□ 1.2
SLC52A1-205ENST00000575919 ITGAEP38570 1179 aa22.53■■□□□ 1.2
SLC52A1-205ENST00000575919 FBLN2P98095 1184 aa22.53■■□□□ 1.2
SLC52A1-205ENST00000575919 SAMD9Q5K651 1589 aa22.52■■□□□ 1.2
SLC52A1-205ENST00000575919 FMN1Q68DA7 1419 aa22.52■■□□□ 1.2
SLC52A1-205ENST00000575919 CASKIN1Q8WXD9 1431 aa22.52■■□□□ 1.2
SLC52A1-205ENST00000575919 MAP3K1Q13233 1512 aa22.52■■□□□ 1.2
SLC52A1-205ENST00000575919 FYCO1Q9BQS8 1478 aa22.5■■□□□ 1.19
SLC52A1-205ENST00000575919 RRBP1Q9P2E9 1410 aaKnown RBP22.49■■□□□ 1.19
SLC52A1-205ENST00000575919 IQGAP2Q13576 1575 aa22.48■■□□□ 1.19
SLC52A1-205ENST00000575919 CCNB3Q8WWL7 1395 aa22.48■■□□□ 1.19
SLC52A1-205ENST00000575919 CHMP7Q8WUX9 453 aaPredicted RBP22.47■■□□□ 1.19
SLC52A1-205ENST00000575919 CFAP43Q8NDM7 1665 aa22.45■■□□□ 1.18
SLC52A1-205ENST00000575919 PHLDB1Q86UU1 1377 aa22.45■■□□□ 1.18
SLC52A1-205ENST00000575919 MYT1Q01538 1121 aa22.45■■□□□ 1.18
SLC52A1-205ENST00000575919 GRIN2AQ12879 1464 aa22.43■■□□□ 1.18
SLC52A1-205ENST00000575919 ARID3CA6NKF2 412 aa22.4■■□□□ 1.18
SLC52A1-205ENST00000575919 FAM50AQ14320 339 aaKnown RBP22.39■■□□□ 1.18
SLC52A1-205ENST00000575919 MAGI1Q96QZ7 1491 aaPredicted RBP22.38■■□□□ 1.17
SLC52A1-205ENST00000575919 LRRIQ1Q96JM4 1722 aa22.37■■□□□ 1.17
SLC52A1-205ENST00000575919 KIAA0586Q9BVV6 1533 aa22.37■■□□□ 1.17
SLC52A1-205ENST00000575919 MTUS2Q5JR59 1369 aa22.36■■□□□ 1.17
SLC52A1-205ENST00000575919 SYNJ2O15056 1496 aa22.35■■□□□ 1.17
SLC52A1-205ENST00000575919 UGGT2Q9NYU1 1516 aa22.32■■□□□ 1.16
SLC52A1-205ENST00000575919 CEP170Q5SW79 1584 aa22.29■■□□□ 1.16
SLC52A1-205ENST00000575919 DISP1Q96F81 1524 aa22.28■■□□□ 1.16
SLC52A1-205ENST00000575919 KIAA0556O60303 1618 aa22.24■■□□□ 1.15
SLC52A1-205ENST00000575919 JPH4Q96JJ6 628 aa22.23■■□□□ 1.15
SLC52A1-205ENST00000575919 DHX57Q6P158 1386 aaKnown RBP22.22■■□□□ 1.15
SLC52A1-205ENST00000575919 CDK13Q14004 1512 aaKnown RBP22.21■■□□□ 1.15
SLC52A1-205ENST00000575919 MAGI3Q5TCQ9 1506 aa22.21■■□□□ 1.15
SLC52A1-205ENST00000575919 HECW1Q76N89 1606 aa22.21■■□□□ 1.15
SLC52A1-205ENST00000575919 EPRSP07814 1512 aaKnown RBP22.2■■□□□ 1.15
SLC52A1-205ENST00000575919 NCOA2Q15596 1464 aa22.2■■□□□ 1.14
SLC52A1-205ENST00000575919 NUP160Q12769 1436 aa22.19■■□□□ 1.14
SLC52A1-205ENST00000575919 CCDC18Q5T9S5 1454 aa22.19■■□□□ 1.14
SLC52A1-205ENST00000575919 FGD6Q6ZV73 1430 aa22.18■■□□□ 1.14
SLC52A1-205ENST00000575919 RAB3GAP2Q9H2M9 1393 aa22.17■■□□□ 1.14
SLC52A1-205ENST00000575919 EHBP1L1Q8N3D4 1523 aa22.15■■□□□ 1.14
SLC52A1-205ENST00000575919 SUPT6HQ7KZ85 1726 aaKnown RBP22.15■■□□□ 1.14
SLC52A1-205ENST00000575919 SETD5Q9C0A6 1442 aa22.11■■□□□ 1.13
SLC52A1-205ENST00000575919 MYOM3Q5VTT5 1437 aa22.11■■□□□ 1.13
SLC52A1-205ENST00000575919 CARMIL2Q6F5E8 1435 aa22.1■■□□□ 1.13
SLC52A1-205ENST00000575919 NUP153P49790 1475 aaKnown RBP22.09■■□□□ 1.13
SLC52A1-205ENST00000575919 PLB1Q6P1J6 1458 aa22.09■■□□□ 1.13
SLC52A1-205ENST00000575919 RAPGEF6Q8TEU7 1601 aa22.08■■□□□ 1.13
SLC52A1-205ENST00000575919 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.07■■□□□ 1.12
SLC52A1-205ENST00000575919 CHD1O14646 1710 aa22.04■■□□□ 1.12
SLC52A1-205ENST00000575919 PTPRKQ15262 1439 aa22.04■■□□□ 1.12
SLC52A1-205ENST00000575919 ARHGEF11O15085 1522 aa22.03■■□□□ 1.12
SLC52A1-205ENST00000575919 CLSPNQ9HAW4 1339 aa22.03■■□□□ 1.12
SLC52A1-205ENST00000575919 CDK11AQ9UQ88 783 aaPredicted RBP22.01■■□□□ 1.11
SLC52A1-205ENST00000575919 PTPN23Q9H3S7 1636 aa22■■□□□ 1.11
SLC52A1-205ENST00000575919 PRG4Q92954 1404 aaPredicted RBP22■■□□□ 1.11
SLC52A1-205ENST00000575919 ACIN1Q9UKV3 1341 aaKnown RBP22■■□□□ 1.11
SLC52A1-205ENST00000575919 CHIC2Q9UKJ5 165 aa21.99■■□□□ 1.11
SLC52A1-205ENST00000575919 ZNF316A6NFI3 1004 aaPredicted RBP21.96■■□□□ 1.11
SLC52A1-205ENST00000575919 RRP7BPQ9NSQ0 103 aa21.94■■□□□ 1.1
SLC52A1-205ENST00000575919 DIEXFQ68CQ4 756 aaKnown RBP21.92■■□□□ 1.1
SLC52A1-205ENST00000575919 ZNF644Q9H582 1327 aaPredicted RBP21.92■■□□□ 1.1
SLC52A1-205ENST00000575919 MAPKBP1O60336 1514 aa21.91■■□□□ 1.1
SLC52A1-205ENST00000575919 PTPRGP23470 1445 aa21.91■■□□□ 1.1
SLC52A1-205ENST00000575919 SIN3AQ96ST3 1273 aa21.89■■□□□ 1.1
SLC52A1-205ENST00000575919 NEUROD1Q13562 356 aa21.89■■□□□ 1.09
SLC52A1-205ENST00000575919 TCOF1Q13428 1488 aaKnown RBP21.88■■□□□ 1.09
SLC52A1-205ENST00000575919 TROQ12816 1431 aaPredicted RBP21.88■■□□□ 1.09
SLC52A1-205ENST00000575919 MIA2Q96PC5 1412 aa21.88■■□□□ 1.09
SLC52A1-205ENST00000575919 HFM1A2PYH4 1435 aa21.87■■□□□ 1.09
SLC52A1-205ENST00000575919 ABCA8O94911 1581 aa21.87■■□□□ 1.09
SLC52A1-205ENST00000575919 PLEKHD1A6NEE1 506 aa21.87■■□□□ 1.09
SLC52A1-205ENST00000575919 NAIPQ13075 1403 aa21.86■■□□□ 1.09
SLC52A1-205ENST00000575919 ATP10BO94823 1461 aa21.85■■□□□ 1.09
SLC52A1-205ENST00000575919 ZNF777Q9ULD5 760 aaPredicted RBP21.85■■□□□ 1.09
SLC52A1-205ENST00000575919 KIF14Q15058 1648 aa21.83■■□□□ 1.09
SLC52A1-205ENST00000575919 ERCC6L2Q5T890 1561 aa21.83■■□□□ 1.09
SLC52A1-205ENST00000575919 CFDP1Q9UEE9 299 aaPredicted RBP21.83■■□□□ 1.08
SLC52A1-205ENST00000575919 SHROOM2Q13796 1616 aa21.77■■□□□ 1.08
SLC52A1-205ENST00000575919 GPATCH8Q9UKJ3 1502 aaKnown RBP21.77■■□□□ 1.08
SLC52A1-205ENST00000575919 GTF3C3Q9Y5Q9 886 aa21.76■■□□□ 1.07
SLC52A1-205ENST00000575919 TRIM52Q96A61 297 aa21.76■■□□□ 1.07
SLC52A1-205ENST00000575919 DAPK1P53355 1430 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms