RNA–Protein interactions for RNA: ENST00000575842.5

ACTG1-210, Transcript of actin gamma 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTG1, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTG1-210ENST00000575842 SETD5Q9C0A6 1442 aa37.84■■■■□ 3.65
ACTG1-210ENST00000575842 DDX10Q13206 875 aaKnown RBP37.82■■■■□ 3.64
ACTG1-210ENST00000575842 KIF27Q86VH2 1401 aa37.78■■■■□ 3.64
ACTG1-210ENST00000575842 TIAM1Q13009 1591 aa37.74■■■■□ 3.63
ACTG1-210ENST00000575842 ITGAEP38570 1179 aa37.66■■■■□ 3.62
ACTG1-210ENST00000575842 ANP32CO43423 234 aa37.64■■■■□ 3.62
ACTG1-210ENST00000575842 FANCIQ9NVI1 1328 aa37.64■■■■□ 3.62
ACTG1-210ENST00000575842 CUX1P39880 1505 aa37.63■■■■□ 3.61
ACTG1-210ENST00000575842 LRRC9Q6ZRR7 1453 aa37.56■■■■□ 3.6
ACTG1-210ENST00000575842 MSH5O43196 834 aa37.56■■■■□ 3.6
ACTG1-210ENST00000575842 SIN3AQ96ST3 1273 aa37.53■■■■□ 3.6
ACTG1-210ENST00000575842 TRIM52Q96A61 297 aa37.52■■■■□ 3.6
ACTG1-210ENST00000575842 PHLDB1Q86UU1 1377 aa37.45■■■■□ 3.59
ACTG1-210ENST00000575842 CFAP43Q8NDM7 1665 aa37.44■■■■□ 3.58
ACTG1-210ENST00000575842 MYT1LQ9UL68 1186 aa37.4■■■■□ 3.58
ACTG1-210ENST00000575842 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP37.39■■■■□ 3.585e-7■□□□□ 8.4
ACTG1-210ENST00000575842 ERICH6BQ5W0A0 696 aa37.38■■■■□ 3.57
ACTG1-210ENST00000575842 CDK11AQ9UQ88 783 aaPredicted RBP37.36■■■■□ 3.57
ACTG1-210ENST00000575842 FHAD1B1AJZ9 1412 aa37.33■■■■□ 3.57
ACTG1-210ENST00000575842 HMGXB3Q12766 1538 aa37.3■■■■□ 3.56
ACTG1-210ENST00000575842 ERICH6Q7L0X2 663 aa37.25■■■■□ 3.55
ACTG1-210ENST00000575842 FAM50AQ14320 339 aaKnown RBP37.24■■■■□ 3.55
ACTG1-210ENST00000575842 CC2D2AQ9P2K1 1620 aa37.24■■■■□ 3.55
ACTG1-210ENST00000575842 IGF1RP08069 1367 aa37.22■■■■□ 3.55
ACTG1-210ENST00000575842 HIRIP3Q9BW71 556 aaPredicted RBP37.2■■■■□ 3.55
ACTG1-210ENST00000575842 CFTRP13569 1480 aa37.2■■■■□ 3.55
ACTG1-210ENST00000575842 TONSLQ96HA7 1378 aa37.19■■■■□ 3.54
ACTG1-210ENST00000575842 NCAPD3P42695 1498 aa37.16■■■■□ 3.54
ACTG1-210ENST00000575842 PCF11O94913 1555 aaKnown RBP37.16■■■■□ 3.54
ACTG1-210ENST00000575842 HNRNPUQ00839 825 aaKnown RBP eCLIP37.1■■■■□ 3.53
ACTG1-210ENST00000575842 PRDM2Q13029 1718 aa37.08■■■■□ 3.53
ACTG1-210ENST00000575842 CARMIL1Q5VZK9 1371 aa37.07■■■■□ 3.53
ACTG1-210ENST00000575842 PPP4R2Q9NY27 417 aa37.07■■■■□ 3.53
ACTG1-210ENST00000575842 FYCO1Q9BQS8 1478 aa37.06■■■■□ 3.52
ACTG1-210ENST00000575842 UACAQ9BZF9 1416 aa37.05■■■■□ 3.52
ACTG1-210ENST00000575842 AQRO60306 1485 aaKnown RBP eCLIP37.02■■■■□ 3.524e-13■■■■■ 34.6
ACTG1-210ENST00000575842 CCDC18Q5T9S5 1454 aa37.02■■■■□ 3.52
ACTG1-210ENST00000575842 HFM1A2PYH4 1435 aa36.98■■■■□ 3.51
ACTG1-210ENST00000575842 KDM5BQ9UGL1 1544 aa36.97■■■■□ 3.51
ACTG1-210ENST00000575842 FGD5Q6ZNL6 1462 aa36.95■■■■□ 3.51
ACTG1-210ENST00000575842 CASKIN1Q8WXD9 1431 aa36.95■■■■□ 3.51
ACTG1-210ENST00000575842 EFCAB5A4FU69 1503 aa36.94■■■■□ 3.5
ACTG1-210ENST00000575842 FGD6Q6ZV73 1430 aa36.93■■■■□ 3.5
ACTG1-210ENST00000575842 PTPN23Q9H3S7 1636 aa36.92■■■■□ 3.5
ACTG1-210ENST00000575842 IRX6P78412 446 aaPredicted RBP36.9■■■■□ 3.5
ACTG1-210ENST00000575842 NCOA2Q15596 1464 aa36.89■■■■□ 3.5
ACTG1-210ENST00000575842 DEKP35659 375 aaKnown RBP36.82■■■■□ 3.48
ACTG1-210ENST00000575842 WASHC2AQ641Q2 1341 aa36.79■■■■□ 3.48
ACTG1-210ENST00000575842 CNTLNQ9NXG0 1405 aa36.78■■■■□ 3.48
ACTG1-210ENST00000575842 NAIPQ13075 1403 aa36.76■■■■□ 3.47
ACTG1-210ENST00000575842 FHOD3Q2V2M9 1422 aa36.75■■■■□ 3.47
ACTG1-210ENST00000575842 PTPRKQ15262 1439 aa36.74■■■■□ 3.47
ACTG1-210ENST00000575842 ZBED9Q6R2W3 1325 aa36.73■■■■□ 3.47
ACTG1-210ENST00000575842 NOP58Q9Y2X3 529 aaKnown RBP36.69■■■■□ 3.46
ACTG1-210ENST00000575842 HSPA5P11021 654 aaKnown RBP36.68■■■■□ 3.46
ACTG1-210ENST00000575842 FMN1Q68DA7 1419 aa36.68■■■■□ 3.46
ACTG1-210ENST00000575842 ATP1B4Q9UN42 357 aaPredicted RBP36.64■■■■□ 3.46
ACTG1-210ENST00000575842 P3H3Q8IVL6 736 aa36.62■■■■□ 3.45
ACTG1-210ENST00000575842 SNAPC4Q5SXM2 1469 aa36.61■■■■□ 3.45
ACTG1-210ENST00000575842 EIF4G2P78344 907 aaKnown RBP eCLIP36.61■■■■□ 3.45
ACTG1-210ENST00000575842 HECW1Q76N89 1606 aa36.6■■■■□ 3.45
ACTG1-210ENST00000575842 B4GALNT3Q6L9W6 998 aa36.6■■■■□ 3.45
ACTG1-210ENST00000575842 CTTNBP2Q8WZ74 1663 aa36.59■■■■□ 3.45
ACTG1-210ENST00000575842 PRKRIP1Q9H875 184 aaPredicted RBP36.57■■■■□ 3.45
ACTG1-210ENST00000575842 NCOA1Q15788 1441 aa36.57■■■■□ 3.44
ACTG1-210ENST00000575842 MYOM3Q5VTT5 1437 aa36.57■■■■□ 3.44
ACTG1-210ENST00000575842 MTUS2Q5JR59 1369 aa36.54■■■■□ 3.44
ACTG1-210ENST00000575842 CCDC184Q52MB2 194 aa36.54■■■■□ 3.44
ACTG1-210ENST00000575842 GCC2Q8IWJ2 1684 aa36.52■■■■□ 3.44
ACTG1-210ENST00000575842 CUL7Q14999 1698 aa36.51■■■■□ 3.44
ACTG1-210ENST00000575842 CCDC7Q96M83 1385 aa36.51■■■■□ 3.43
ACTG1-210ENST00000575842 THOC2Q8NI27 1593 aaKnown RBP36.5■■■■□ 3.43
ACTG1-210ENST00000575842 CADPSQ9ULU8 1353 aa36.49■■■■□ 3.43
ACTG1-210ENST00000575842 SUPT6HQ7KZ85 1726 aaKnown RBP36.48■■■■□ 3.43
ACTG1-210ENST00000575842 AKNAQ7Z591 1439 aa36.48■■■■□ 3.43
ACTG1-210ENST00000575842 ABCA5Q8WWZ7 1642 aa36.47■■■■□ 3.43
ACTG1-210ENST00000575842 MRS2Q9HD23 443 aa36.46■■■■□ 3.43
ACTG1-210ENST00000575842 SMG6Q86US8 1419 aaKnown RBP36.45■■■■□ 3.43
ACTG1-210ENST00000575842 DENND4BO75064 1496 aaPredicted RBP36.45■■■■□ 3.43
ACTG1-210ENST00000575842 POLR1AO95602 1720 aaPredicted RBP36.44■■■■□ 3.42
ACTG1-210ENST00000575842 EHBP1L1Q8N3D4 1523 aa36.44■■■■□ 3.42
ACTG1-210ENST00000575842 FAM9BQ8IZU0 186 aa36.42■■■■□ 3.42
ACTG1-210ENST00000575842 ABCA10Q8WWZ4 1543 aa36.42■■■■□ 3.42
ACTG1-210ENST00000575842 LRRIQ1Q96JM4 1722 aa36.4■■■■□ 3.42
ACTG1-210ENST00000575842 PAK3O75914 559 aaPredicted RBP36.4■■■■□ 3.42
ACTG1-210ENST00000575842 RNF123Q5XPI4 1314 aa36.39■■■■□ 3.42
ACTG1-210ENST00000575842 ARHGEF11O15085 1522 aa36.39■■■■□ 3.42
ACTG1-210ENST00000575842 TCOF1Q13428 1488 aaKnown RBP36.38■■■■□ 3.41
ACTG1-210ENST00000575842 SAMD9Q5K651 1589 aa36.37■■■■□ 3.41
ACTG1-210ENST00000575842 IPO9Q96P70 1041 aaKnown RBP36.37■■■■□ 3.41
ACTG1-210ENST00000575842 UGGT2Q9NYU1 1516 aa36.37■■■■□ 3.41
ACTG1-210ENST00000575842 GRIN2BQ13224 1484 aa36.36■■■■□ 3.41
ACTG1-210ENST00000575842 ANP32AP39687 249 aaKnown RBP36.34■■■■□ 3.41
ACTG1-210ENST00000575842 NBR1Q14596 966 aa36.32■■■■□ 3.4
ACTG1-210ENST00000575842 C11orf95C9JLR9 678 aaPredicted RBP36.31■■■■□ 3.4
ACTG1-210ENST00000575842 PRKCSHP14314 528 aaPredicted RBP36.28■■■■□ 3.4
ACTG1-210ENST00000575842 DNMBPQ6XZF7 1577 aa36.26■■■■□ 3.4
ACTG1-210ENST00000575842 SPATA31E1Q6ZUB1 1445 aa36.25■■■■□ 3.39
ACTG1-210ENST00000575842 NUDCQ9Y266 331 aa36.25■■■■□ 3.39
ACTG1-210ENST00000575842 RTL5Q5HYW3 569 aaPredicted RBP36.24■■■■□ 3.39
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms