RNA–Protein interactions for RNA: ENST00000575261.5

TVP23B-208, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 697 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-208ENST00000575261 JPH4Q96JJ6 628 aa18.38■□□□□ 0.53
TVP23B-208ENST00000575261 KIF27Q86VH2 1401 aa18.37■□□□□ 0.53
TVP23B-208ENST00000575261 KIF13AQ9H1H9 1805 aa18.33■□□□□ 0.52
TVP23B-208ENST00000575261 IGF1RP08069 1367 aa18.31■□□□□ 0.52
TVP23B-208ENST00000575261 KIAA0586Q9BVV6 1533 aa18.31■□□□□ 0.52
TVP23B-208ENST00000575261 ADCY10Q96PN6 1610 aa18.27■□□□□ 0.51
TVP23B-208ENST00000575261 MAPKBP1O60336 1514 aa18.26■□□□□ 0.51
TVP23B-208ENST00000575261 ABCC10Q5T3U5 1492 aa18.22■□□□□ 0.51
TVP23B-208ENST00000575261 NPM1P06748 294 aaKnown RBP eCLIP18.22■□□□□ 0.51
TVP23B-208ENST00000575261 CARMIL1Q5VZK9 1371 aa18.21■□□□□ 0.51
TVP23B-208ENST00000575261 DIP2BQ9P265 1576 aa18.21■□□□□ 0.51
TVP23B-208ENST00000575261 IQGAP2Q13576 1575 aa18.17■□□□□ 0.5
TVP23B-208ENST00000575261 FAM69CQ0P6D2 419 aa18.16■□□□□ 0.5
TVP23B-208ENST00000575261 CARMIL2Q6F5E8 1435 aa18.15■□□□□ 0.5
TVP23B-208ENST00000575261 PTPRGP23470 1445 aa18.13■□□□□ 0.49
TVP23B-208ENST00000575261 TNIKQ9UKE5 1360 aa18.11■□□□□ 0.49
TVP23B-208ENST00000575261 ABCC2Q92887 1545 aa18.08■□□□□ 0.48
TVP23B-208ENST00000575261 RAPGEF2Q9Y4G8 1499 aa18.07■□□□□ 0.48
TVP23B-208ENST00000575261 KDM6BO15054 1643 aa18.06■□□□□ 0.48
TVP23B-208ENST00000575261 DISP1Q96F81 1524 aa18.05■□□□□ 0.48
TVP23B-208ENST00000575261 TSPOAP1O95153 1857 aa18.05■□□□□ 0.48
TVP23B-208ENST00000575261 TTBK1Q5TCY1 1321 aaPredicted RBP18.04■□□□□ 0.48
TVP23B-208ENST00000575261 UHRF1BP1LA0JNW5 1464 aa18.04■□□□□ 0.48
TVP23B-208ENST00000575261 UGGT2Q9NYU1 1516 aa18.03■□□□□ 0.48
TVP23B-208ENST00000575261 UACAQ9BZF9 1416 aa18.01■□□□□ 0.47
TVP23B-208ENST00000575261 KIAA0556O60303 1618 aa18.01■□□□□ 0.47
TVP23B-208ENST00000575261 PLB1Q6P1J6 1458 aa18.01■□□□□ 0.47
TVP23B-208ENST00000575261 ASXL2Q76L83 1435 aa18■□□□□ 0.47
TVP23B-208ENST00000575261 GLI2P10070 1586 aa17.98■□□□□ 0.47
TVP23B-208ENST00000575261 CTTNBP2Q8WZ74 1663 aa17.98■□□□□ 0.47
TVP23B-208ENST00000575261 KDM5BQ9UGL1 1544 aa17.96■□□□□ 0.47
TVP23B-208ENST00000575261 PPRC1Q5VV67 1664 aaKnown RBP17.94■□□□□ 0.46
TVP23B-208ENST00000575261 ZCCHC11Q5TAX3 1644 aaKnown RBP17.94■□□□□ 0.46
TVP23B-208ENST00000575261 EPRSP07814 1512 aaKnown RBP17.9■□□□□ 0.46
TVP23B-208ENST00000575261 MAP3K4Q9Y6R4 1608 aa17.9■□□□□ 0.46
TVP23B-208ENST00000575261 GOLGA3Q08378 1498 aa17.88■□□□□ 0.45
TVP23B-208ENST00000575261 PRXQ9BXM0 1461 aa17.87■□□□□ 0.45
TVP23B-208ENST00000575261 CHIC1Q5VXU3 224 aa17.86■□□□□ 0.45
TVP23B-208ENST00000575261 TEX14Q8IWB6 1497 aa17.85■□□□□ 0.45
TVP23B-208ENST00000575261 WDR7Q9Y4E6 1490 aa17.85■□□□□ 0.45
TVP23B-208ENST00000575261 ABCA8O94911 1581 aa17.82■□□□□ 0.44
TVP23B-208ENST00000575261 KDM4FA0A1W2PPD8 638 aa17.81■□□□□ 0.44
TVP23B-208ENST00000575261 COL17A1Q9UMD9 1497 aaPredicted RBP17.77■□□□□ 0.44
TVP23B-208ENST00000575261 CFAP43Q8NDM7 1665 aa17.77■□□□□ 0.43
TVP23B-208ENST00000575261 ADGRL1O94910 1474 aa17.73■□□□□ 0.43
TVP23B-208ENST00000575261 MAGI3Q5TCQ9 1506 aa17.72■□□□□ 0.43
TVP23B-208ENST00000575261 CD109Q6YHK3 1445 aa17.71■□□□□ 0.43
TVP23B-208ENST00000575261 SAMD9Q5K651 1589 aa17.7■□□□□ 0.42
TVP23B-208ENST00000575261 FAM9AQ8IZU1 332 aaPredicted RBP17.68■□□□□ 0.42
TVP23B-208ENST00000575261 EEA1Q15075 1411 aa17.66■□□□□ 0.42
TVP23B-208ENST00000575261 CSRNP3Q8WYN3 585 aa17.66■□□□□ 0.42
TVP23B-208ENST00000575261 KCNH8Q96L42 1107 aa17.66■□□□□ 0.42
TVP23B-208ENST00000575261 ATP10BO94823 1461 aa17.64■□□□□ 0.41
TVP23B-208ENST00000575261 RAPGEF6Q8TEU7 1601 aa17.63■□□□□ 0.41
TVP23B-208ENST00000575261 P3H3Q8IVL6 736 aa17.63■□□□□ 0.41
TVP23B-208ENST00000575261 ABCA9Q8IUA7 1624 aa17.61■□□□□ 0.41
TVP23B-208ENST00000575261 ARID3CA6NKF2 412 aa17.6■□□□□ 0.41
TVP23B-208ENST00000575261 ARAP3Q8WWN8 1544 aa17.58■□□□□ 0.41
TVP23B-208ENST00000575261 KIF21BO75037 1637 aa17.55■□□□□ 0.4
TVP23B-208ENST00000575261 NUP153P49790 1475 aaKnown RBP17.55■□□□□ 0.4
TVP23B-208ENST00000575261 FHOD3Q2V2M9 1422 aa17.54■□□□□ 0.4
TVP23B-208ENST00000575261 PHLDB1Q86UU1 1377 aa17.53■□□□□ 0.4
TVP23B-208ENST00000575261 EFCAB5A4FU69 1503 aa17.53■□□□□ 0.4
TVP23B-208ENST00000575261 HECW2Q9P2P5 1572 aa17.52■□□□□ 0.39
TVP23B-208ENST00000575261 NEO1Q92859 1461 aa17.51■□□□□ 0.39
TVP23B-208ENST00000575261 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.5■□□□□ 0.39
TVP23B-208ENST00000575261 HNRNPUL2Q1KMD3 747 aaKnown RBP17.5■□□□□ 0.39
TVP23B-208ENST00000575261 RANGAP1P46060 587 aaPredicted RBP17.49■□□□□ 0.39
TVP23B-208ENST00000575261 FRMPD1Q5SYB0 1578 aa17.45■□□□□ 0.38
TVP23B-208ENST00000575261 CFAP74Q9C0B2 1584 aa17.44■□□□□ 0.38
TVP23B-208ENST00000575261 PLEKHD1A6NEE1 506 aa17.41■□□□□ 0.38
TVP23B-208ENST00000575261 RAPGEF3O95398 923 aa17.41■□□□□ 0.38
TVP23B-208ENST00000575261 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.41■□□□□ 0.38
TVP23B-208ENST00000575261 ARHGEF40Q8TER5 1519 aa17.4■□□□□ 0.38
TVP23B-208ENST00000575261 TTC37Q6PGP7 1564 aa17.4■□□□□ 0.38
TVP23B-208ENST00000575261 ADAMTSL3P82987 1691 aa17.39■□□□□ 0.37
TVP23B-208ENST00000575261 RICTORQ6R327 1708 aa17.38■□□□□ 0.37
TVP23B-208ENST00000575261 FANCAO15360 1455 aa17.38■□□□□ 0.37
TVP23B-208ENST00000575261 CDK13Q14004 1512 aaKnown RBP17.38■□□□□ 0.37
TVP23B-208ENST00000575261 DENND4BO75064 1496 aaPredicted RBP17.37■□□□□ 0.37
TVP23B-208ENST00000575261 BCORL1Q5H9F3 1711 aa17.37■□□□□ 0.37
TVP23B-208ENST00000575261 AKNAQ7Z591 1439 aa17.36■□□□□ 0.37
TVP23B-208ENST00000575261 PTPRMP28827 1452 aa17.36■□□□□ 0.37
TVP23B-208ENST00000575261 HECW1Q76N89 1606 aa17.36■□□□□ 0.37
TVP23B-208ENST00000575261 FMN1Q68DA7 1419 aa17.35■□□□□ 0.37
TVP23B-208ENST00000575261 ZMYM4Q5VZL5 1548 aa17.34■□□□□ 0.37
TVP23B-208ENST00000575261 MADDQ8WXG6 1647 aa17.33■□□□□ 0.37
TVP23B-208ENST00000575261 UBTFP17480 764 aaKnown RBP17.32■□□□□ 0.36
TVP23B-208ENST00000575261 ARHGAP35Q9NRY4 1499 aa17.31■□□□□ 0.36
TVP23B-208ENST00000575261 ILDR1Q86SU0 546 aaPredicted RBP17.31■□□□□ 0.36
TVP23B-208ENST00000575261 ARID4BQ4LE39 1312 aaPredicted RBP17.3■□□□□ 0.36
TVP23B-208ENST00000575261 EHMT2Q96KQ7 1210 aa17.29■□□□□ 0.36
TVP23B-208ENST00000575261 ZFYVE16Q7Z3T8 1539 aa17.29■□□□□ 0.36
TVP23B-208ENST00000575261 MYO5CQ9NQX4 1742 aa17.28■□□□□ 0.36
TVP23B-208ENST00000575261 MAGI2Q86UL8 1455 aa17.27■□□□□ 0.36
TVP23B-208ENST00000575261 KIF14Q15058 1648 aa17.27■□□□□ 0.36
TVP23B-208ENST00000575261 PLCH2O75038 1416 aa17.27■□□□□ 0.35
TVP23B-208ENST00000575261 RIMS1Q86UR5 1692 aaKnown RBP17.26■□□□□ 0.35
TVP23B-208ENST00000575261 POGZQ7Z3K3 1410 aa17.26■□□□□ 0.35
TVP23B-208ENST00000575261 PCF11O94913 1555 aaKnown RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms