RNA–Protein interactions for RNA: ENST00000574822.6

CACNA1A-204, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 806 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-204ENST00000574822 KIAA0586Q9BVV6 1533 aa19.81■□□□□ 0.76
CACNA1A-204ENST00000574822 IQGAP2Q13576 1575 aa19.79■□□□□ 0.76
CACNA1A-204ENST00000574822 UBTFP17480 764 aaKnown RBP19.79■□□□□ 0.76
CACNA1A-204ENST00000574822 EHMT2Q96KQ7 1210 aa19.78■□□□□ 0.76
CACNA1A-204ENST00000574822 SHROOM2Q13796 1616 aa19.71■□□□□ 0.75
CACNA1A-204ENST00000574822 TNIKQ9UKE5 1360 aa19.68■□□□□ 0.74
CACNA1A-204ENST00000574822 UGGT2Q9NYU1 1516 aa19.66■□□□□ 0.74
CACNA1A-204ENST00000574822 JPH4Q96JJ6 628 aa19.66■□□□□ 0.74
CACNA1A-204ENST00000574822 CARMIL2Q6F5E8 1435 aa19.63■□□□□ 0.73
CACNA1A-204ENST00000574822 LOC105371045A0A1W2PR82 267 aa19.62■□□□□ 0.73
CACNA1A-204ENST00000574822 EFCAB5A4FU69 1503 aa19.61■□□□□ 0.73
CACNA1A-204ENST00000574822 PRG4Q92954 1404 aaPredicted RBP19.61■□□□□ 0.73
CACNA1A-204ENST00000574822 KIAA0556O60303 1618 aa19.58■□□□□ 0.73
CACNA1A-204ENST00000574822 SAMD9Q5K651 1589 aa19.57■□□□□ 0.72
CACNA1A-204ENST00000574822 ARHGEF11O15085 1522 aa19.57■□□□□ 0.72
CACNA1A-204ENST00000574822 RANGAP1P46060 587 aaPredicted RBP19.57■□□□□ 0.72
CACNA1A-204ENST00000574822 DISP1Q96F81 1524 aa19.55■□□□□ 0.72
CACNA1A-204ENST00000574822 RIMBP3CA6NJZ7 1639 aa19.54■□□□□ 0.72
CACNA1A-204ENST00000574822 RIMBP3BA6NNM3 1639 aa19.54■□□□□ 0.72
CACNA1A-204ENST00000574822 RIMBP3Q9UFD9 1639 aa19.54■□□□□ 0.72
CACNA1A-204ENST00000574822 CLIP1P30622 1438 aa19.53■□□□□ 0.72
CACNA1A-204ENST00000574822 CEP162Q5TB80 1403 aa19.53■□□□□ 0.72
CACNA1A-204ENST00000574822 ERCC6L2Q5T890 1561 aa19.52■□□□□ 0.71
CACNA1A-204ENST00000574822 DNAJC5Q9H3Z4 198 aa19.51■□□□□ 0.71
CACNA1A-204ENST00000574822 ARHGAP35Q9NRY4 1499 aa19.48■□□□□ 0.71
CACNA1A-204ENST00000574822 P3H3Q8IVL6 736 aa19.45■□□□□ 0.7
CACNA1A-204ENST00000574822 FHOD3Q2V2M9 1422 aa19.44■□□□□ 0.7
CACNA1A-204ENST00000574822 PTPRGP23470 1445 aa19.43■□□□□ 0.7
CACNA1A-204ENST00000574822 ARAP1Q96P48 1450 aa19.41■□□□□ 0.7
CACNA1A-204ENST00000574822 TTBK1Q5TCY1 1321 aaPredicted RBP19.41■□□□□ 0.7
CACNA1A-204ENST00000574822 FMN1Q68DA7 1419 aa19.41■□□□□ 0.7
CACNA1A-204ENST00000574822 RAPGEF6Q8TEU7 1601 aa19.33■□□□□ 0.69
CACNA1A-204ENST00000574822 CYB5RLQ6IPT4 315 aa19.33■□□□□ 0.68
CACNA1A-204ENST00000574822 UACAQ9BZF9 1416 aa19.33■□□□□ 0.68
CACNA1A-204ENST00000574822 ABCA8O94911 1581 aa19.32■□□□□ 0.68
CACNA1A-204ENST00000574822 ABCC2Q92887 1545 aa19.3■□□□□ 0.68
CACNA1A-204ENST00000574822 PLB1Q6P1J6 1458 aa19.3■□□□□ 0.68
CACNA1A-204ENST00000574822 HECW1Q76N89 1606 aa19.3■□□□□ 0.68
CACNA1A-204ENST00000574822 UHRF1BP1LA0JNW5 1464 aa19.29■□□□□ 0.68
CACNA1A-204ENST00000574822 PCF11O94913 1555 aaKnown RBP19.28■□□□□ 0.68
CACNA1A-204ENST00000574822 VPS8Q8N3P4 1428 aa19.28■□□□□ 0.68
CACNA1A-204ENST00000574822 ADCY10Q96PN6 1610 aa19.28■□□□□ 0.68
CACNA1A-204ENST00000574822 FYCO1Q9BQS8 1478 aa19.27■□□□□ 0.67
CACNA1A-204ENST00000574822 CASKIN1Q8WXD9 1431 aa19.25■□□□□ 0.67
CACNA1A-204ENST00000574822 NPM1P06748 294 aaKnown RBP eCLIP19.22■□□□□ 0.67
CACNA1A-204ENST00000574822 ATP1B4Q9UN42 357 aaPredicted RBP19.22■□□□□ 0.67
CACNA1A-204ENST00000574822 NUP153P49790 1475 aaKnown RBP19.21■□□□□ 0.67
CACNA1A-204ENST00000574822 CCDC18Q5T9S5 1454 aa19.2■□□□□ 0.66
CACNA1A-204ENST00000574822 KDM5BQ9UGL1 1544 aa19.19■□□□□ 0.66
CACNA1A-204ENST00000574822 ZCCHC11Q5TAX3 1644 aaKnown RBP19.18■□□□□ 0.66
CACNA1A-204ENST00000574822 EPRSP07814 1512 aaKnown RBP19.16■□□□□ 0.66
CACNA1A-204ENST00000574822 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.15■□□□□ 0.66
CACNA1A-204ENST00000574822 HNRNPUL2Q1KMD3 747 aaKnown RBP19.15■□□□□ 0.66
CACNA1A-204ENST00000574822 LRRIQ1Q96JM4 1722 aa19.14■□□□□ 0.65
CACNA1A-204ENST00000574822 APLP2Q06481 763 aa19.13■□□□□ 0.65
CACNA1A-204ENST00000574822 CDK13Q14004 1512 aaKnown RBP19.12■□□□□ 0.65
CACNA1A-204ENST00000574822 ATP10BO94823 1461 aa19.12■□□□□ 0.65
CACNA1A-204ENST00000574822 ARID3CA6NKF2 412 aa19.12■□□□□ 0.65
CACNA1A-204ENST00000574822 CFAP43Q8NDM7 1665 aa19.11■□□□□ 0.65
CACNA1A-204ENST00000574822 CDK11AQ9UQ88 783 aaPredicted RBP19.11■□□□□ 0.65
CACNA1A-204ENST00000574822 MAPKBP1O60336 1514 aa19.1■□□□□ 0.65
CACNA1A-204ENST00000574822 TIAM1Q13009 1591 aa19.08■□□□□ 0.65
CACNA1A-204ENST00000574822 MAP3K1Q13233 1512 aa19.07■□□□□ 0.64
CACNA1A-204ENST00000574822 WDR7Q9Y4E6 1490 aa19.05■□□□□ 0.64
CACNA1A-204ENST00000574822 ASXL2Q76L83 1435 aa19.05■□□□□ 0.64
CACNA1A-204ENST00000574822 PLEKHD1A6NEE1 506 aa19.04■□□□□ 0.64
CACNA1A-204ENST00000574822 EHBP1L1Q8N3D4 1523 aa19.01■□□□□ 0.63
CACNA1A-204ENST00000574822 MTUS2Q5JR59 1369 aa19.01■□□□□ 0.63
CACNA1A-204ENST00000574822 TROQ12816 1431 aaPredicted RBP19■□□□□ 0.63
CACNA1A-204ENST00000574822 KIF14Q15058 1648 aa18.99■□□□□ 0.63
CACNA1A-204ENST00000574822 LRRC9Q6ZRR7 1453 aa18.97■□□□□ 0.63
CACNA1A-204ENST00000574822 MAGI3Q5TCQ9 1506 aa18.95■□□□□ 0.62
CACNA1A-204ENST00000574822 SUPT6HQ7KZ85 1726 aaKnown RBP18.94■□□□□ 0.62
CACNA1A-204ENST00000574822 DIP2BQ9P265 1576 aa18.94■□□□□ 0.62
CACNA1A-204ENST00000574822 ABCC10Q5T3U5 1492 aa18.93■□□□□ 0.62
CACNA1A-204ENST00000574822 KCNH8Q96L42 1107 aa18.93■□□□□ 0.62
CACNA1A-204ENST00000574822 GLI2P10070 1586 aa18.91■□□□□ 0.62
CACNA1A-204ENST00000574822 ABCA9Q8IUA7 1624 aa18.89■□□□□ 0.62
CACNA1A-204ENST00000574822 KIF13AQ9H1H9 1805 aa18.89■□□□□ 0.61
CACNA1A-204ENST00000574822 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.87■□□□□ 0.61
CACNA1A-204ENST00000574822 MYO5CQ9NQX4 1742 aa18.86■□□□□ 0.61
CACNA1A-204ENST00000574822 TTC37Q6PGP7 1564 aa18.86■□□□□ 0.61
CACNA1A-204ENST00000574822 TRHP20396 242 aaPredicted RBP18.86■□□□□ 0.61
CACNA1A-204ENST00000574822 FAM69CQ0P6D2 419 aa18.86■□□□□ 0.61
CACNA1A-204ENST00000574822 KANK4Q5T7N3 995 aaPredicted RBP18.86■□□□□ 0.61
CACNA1A-204ENST00000574822 MAP3K4Q9Y6R4 1608 aa18.85■□□□□ 0.61
CACNA1A-204ENST00000574822 ITSN2Q9NZM3 1697 aa18.85■□□□□ 0.61
CACNA1A-204ENST00000574822 NCOA2Q15596 1464 aa18.84■□□□□ 0.61
CACNA1A-204ENST00000574822 CCNB3Q8WWL7 1395 aa18.81■□□□□ 0.6
CACNA1A-204ENST00000574822 CD109Q6YHK3 1445 aa18.81■□□□□ 0.6
CACNA1A-204ENST00000574822 PREX2Q70Z35 1606 aa18.81■□□□□ 0.6
CACNA1A-204ENST00000574822 CDC42BPAQ5VT25 1732 aa18.8■□□□□ 0.6
CACNA1A-204ENST00000574822 CFAP74Q9C0B2 1584 aa18.79■□□□□ 0.6
CACNA1A-204ENST00000574822 ARAP3Q8WWN8 1544 aa18.79■□□□□ 0.6
CACNA1A-204ENST00000574822 TSPOAP1O95153 1857 aa18.78■□□□□ 0.6
CACNA1A-204ENST00000574822 TEX14Q8IWB6 1497 aa18.77■□□□□ 0.6
CACNA1A-204ENST00000574822 ARHGAP5Q13017 1502 aa18.77■□□□□ 0.6
CACNA1A-204ENST00000574822 PPARGC1BQ86YN6 1023 aaKnown RBP18.76■□□□□ 0.59
CACNA1A-204ENST00000574822 PLCH2O75038 1416 aa18.75■□□□□ 0.59
CACNA1A-204ENST00000574822 MYOM3Q5VTT5 1437 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms