RNA–Protein interactions for RNA: ENST00000573867.1

SCARF1-207, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-207ENST00000573867 JPH4Q96JJ6 628 aa47.04■■■■■ 5.12
SCARF1-207ENST00000573867 KIAA0586Q9BVV6 1533 aa47.04■■■■■ 5.12
SCARF1-207ENST00000573867 PRG4Q92954 1404 aaPredicted RBP47■■■■■ 5.11
SCARF1-207ENST00000573867 RAPGEF2Q9Y4G8 1499 aa46.97■■■■■ 5.11
SCARF1-207ENST00000573867 CHIC1Q5VXU3 224 aa46.83■■■■■ 5.09
SCARF1-207ENST00000573867 PRXQ9BXM0 1461 aa46.82■■■■■ 5.09
SCARF1-207ENST00000573867 IQGAP2Q13576 1575 aa46.76■■■■■ 5.08
SCARF1-207ENST00000573867 CSRNP3Q8WYN3 585 aa46.66■■■■■ 5.06
SCARF1-207ENST00000573867 EEA1Q15075 1411 aa46.62■■■■■ 5.05
SCARF1-207ENST00000573867 CTTNBP2Q8WZ74 1663 aa46.53■■■■■ 5.04
SCARF1-207ENST00000573867 UGGT2Q9NYU1 1516 aa46.52■■■■■ 5.04
SCARF1-207ENST00000573867 DISP1Q96F81 1524 aa46.51■■■■■ 5.04
SCARF1-207ENST00000573867 FAM9AQ8IZU1 332 aaPredicted RBP46.51■■■■■ 5.04
SCARF1-207ENST00000573867 CARMIL2Q6F5E8 1435 aa46.47■■■■■ 5.03
SCARF1-207ENST00000573867 TNIKQ9UKE5 1360 aa46.39■■■■■ 5.02
SCARF1-207ENST00000573867 PTPRGP23470 1445 aa46.38■■■■■ 5.02
SCARF1-207ENST00000573867 TRHP20396 242 aaPredicted RBP46.37■■■■■ 5.01
SCARF1-207ENST00000573867 ADCY10Q96PN6 1610 aa46.36■■■■■ 5.01
SCARF1-207ENST00000573867 KIAA0556O60303 1618 aa46.34■■■■■ 5.01
SCARF1-207ENST00000573867 TTBK1Q5TCY1 1321 aaPredicted RBP46.31■■■■■ 5
SCARF1-207ENST00000573867 KIF21BO75037 1637 aa46.24■■■■■ 4.99
SCARF1-207ENST00000573867 GOLGA3Q08378 1498 aa46.14■■■■■ 4.98
SCARF1-207ENST00000573867 UACAQ9BZF9 1416 aa46.08■■■■■ 4.97
SCARF1-207ENST00000573867 UHRF1BP1LA0JNW5 1464 aa46.06■■■■■ 4.96
SCARF1-207ENST00000573867 MAPKBP1O60336 1514 aa46.05■■■■■ 4.96
SCARF1-207ENST00000573867 NPM1P06748 294 aaKnown RBP eCLIP46.05■■■■■ 4.96
SCARF1-207ENST00000573867 ABCC2Q92887 1545 aa46.02■■■■■ 4.96
SCARF1-207ENST00000573867 SAMD9Q5K651 1589 aa45.98■■■■■ 4.95
SCARF1-207ENST00000573867 EHMT2Q96KQ7 1210 aa45.96■■■■■ 4.95
SCARF1-207ENST00000573867 PLB1Q6P1J6 1458 aa45.93■■■■■ 4.94
SCARF1-207ENST00000573867 P3H3Q8IVL6 736 aa45.93■■■■■ 4.94
SCARF1-207ENST00000573867 KIF13AQ9H1H9 1805 aa45.91■■■■■ 4.94
SCARF1-207ENST00000573867 ABCA8O94911 1581 aa45.87■■■■■ 4.93
SCARF1-207ENST00000573867 ABCC10Q5T3U5 1492 aa45.87■■■■■ 4.93
SCARF1-207ENST00000573867 KDM5BQ9UGL1 1544 aa45.86■■■■■ 4.93
SCARF1-207ENST00000573867 RANGAP1P46060 587 aaPredicted RBP45.85■■■■■ 4.93
SCARF1-207ENST00000573867 DIP2BQ9P265 1576 aa45.82■■■■■ 4.93
SCARF1-207ENST00000573867 UBTFP17480 764 aaKnown RBP45.78■■■■■ 4.92
SCARF1-207ENST00000573867 ZCCHC11Q5TAX3 1644 aaKnown RBP45.77■■■■■ 4.92
SCARF1-207ENST00000573867 ASXL2Q76L83 1435 aa45.76■■■■■ 4.92
SCARF1-207ENST00000573867 FAM69CQ0P6D2 419 aa45.74■■■■■ 4.91
SCARF1-207ENST00000573867 FHOD3Q2V2M9 1422 aa45.72■■■■■ 4.91
SCARF1-207ENST00000573867 EFCAB5A4FU69 1503 aa45.67■■■■■ 4.9
SCARF1-207ENST00000573867 RAPGEF6Q8TEU7 1601 aa45.55■■■■■ 4.88
SCARF1-207ENST00000573867 ARHGAP35Q9NRY4 1499 aa45.5■■■■■ 4.87
SCARF1-207ENST00000573867 EPRSP07814 1512 aaKnown RBP45.5■■■■■ 4.87
SCARF1-207ENST00000573867 GLI2P10070 1586 aa45.5■■■■■ 4.87
SCARF1-207ENST00000573867 ARID3CA6NKF2 412 aa45.49■■■■■ 4.87
SCARF1-207ENST00000573867 ATP10BO94823 1461 aa45.49■■■■■ 4.87
SCARF1-207ENST00000573867 WDR7Q9Y4E6 1490 aa45.48■■■■■ 4.87
SCARF1-207ENST00000573867 NUP153P49790 1475 aaKnown RBP45.43■■■■■ 4.86
SCARF1-207ENST00000573867 TSPOAP1O95153 1857 aa45.38■■■■■ 4.86
SCARF1-207ENST00000573867 PPRC1Q5VV67 1664 aaKnown RBP45.31■■■■■ 4.84
SCARF1-207ENST00000573867 MAP3K4Q9Y6R4 1608 aa45.3■■■■■ 4.84
SCARF1-207ENST00000573867 KCNH8Q96L42 1107 aa45.24■■■■■ 4.83
SCARF1-207ENST00000573867 FMN1Q68DA7 1419 aa45.22■■■■■ 4.83
SCARF1-207ENST00000573867 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP45.15■■■■■ 4.82
SCARF1-207ENST00000573867 HNRNPUL2Q1KMD3 747 aaKnown RBP45.15■■■■■ 4.82
SCARF1-207ENST00000573867 CDK13Q14004 1512 aaKnown RBP45.11■■■■■ 4.81
SCARF1-207ENST00000573867 CLIP1P30622 1438 aa45.11■■■■■ 4.81
SCARF1-207ENST00000573867 CFAP43Q8NDM7 1665 aa45.09■■■■■ 4.81
SCARF1-207ENST00000573867 KDM6BO15054 1643 aa45.08■■■■■ 4.81
SCARF1-207ENST00000573867 CD109Q6YHK3 1445 aa45.07■■■■■ 4.81
SCARF1-207ENST00000573867 HECW1Q76N89 1606 aa45.06■■■■■ 4.8
SCARF1-207ENST00000573867 TEX14Q8IWB6 1497 aa45.01■■■■■ 4.8
SCARF1-207ENST00000573867 MAGI3Q5TCQ9 1506 aa45■■■■■ 4.79
SCARF1-207ENST00000573867 ATP1B4Q9UN42 357 aaPredicted RBP44.99■■■■■ 4.79
SCARF1-207ENST00000573867 ABCA9Q8IUA7 1624 aa44.99■■■■■ 4.79
SCARF1-207ENST00000573867 PCF11O94913 1555 aaKnown RBP44.96■■■■■ 4.79
SCARF1-207ENST00000573867 LOC105371045A0A1W2PR82 267 aa44.95■■■■■ 4.79
SCARF1-207ENST00000573867 PLEKHD1A6NEE1 506 aa44.95■■■■■ 4.79
SCARF1-207ENST00000573867 COL17A1Q9UMD9 1497 aaPredicted RBP44.95■■■■■ 4.79
SCARF1-207ENST00000573867 LRRIQ1Q96JM4 1722 aa44.93■■■■■ 4.78
SCARF1-207ENST00000573867 CASKIN1Q8WXD9 1431 aa44.91■■■■■ 4.78
SCARF1-207ENST00000573867 CEP162Q5TB80 1403 aa44.89■■■■■ 4.78
SCARF1-207ENST00000573867 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP44.8■■■■■ 4.76
SCARF1-207ENST00000573867 FYCO1Q9BQS8 1478 aa44.78■■■■■ 4.76
SCARF1-207ENST00000573867 TTC37Q6PGP7 1564 aa44.76■■■■■ 4.76
SCARF1-207ENST00000573867 CCDC18Q5T9S5 1454 aa44.7■■■■■ 4.75
SCARF1-207ENST00000573867 TROQ12816 1431 aaPredicted RBP44.67■■■■■ 4.74
SCARF1-207ENST00000573867 CDK11AQ9UQ88 783 aaPredicted RBP44.66■■■■■ 4.74
SCARF1-207ENST00000573867 KIF14Q15058 1648 aa44.64■■■■■ 4.74
SCARF1-207ENST00000573867 ARAP3Q8WWN8 1544 aa44.62■■■■■ 4.73
SCARF1-207ENST00000573867 NEO1Q92859 1461 aa44.61■■■■■ 4.73
SCARF1-207ENST00000573867 PHLDB1Q86UU1 1377 aa44.55■■■■■ 4.72
SCARF1-207ENST00000573867 FANCAO15360 1455 aa44.5■■■■■ 4.71
SCARF1-207ENST00000573867 PLCH2O75038 1416 aa44.49■■■■■ 4.71
SCARF1-207ENST00000573867 AKNAQ7Z591 1439 aa44.44■■■■■ 4.7
SCARF1-207ENST00000573867 CFAP74Q9C0B2 1584 aa44.43■■■■■ 4.7
SCARF1-207ENST00000573867 MYO5CQ9NQX4 1742 aa44.41■■■■■ 4.7
SCARF1-207ENST00000573867 FRMPD1Q5SYB0 1578 aa44.41■■■■■ 4.7
SCARF1-207ENST00000573867 RAPGEF3O95398 923 aa44.41■■■■■ 4.7
SCARF1-207ENST00000573867 VPS8Q8N3P4 1428 aa44.34■■■■■ 4.69
SCARF1-207ENST00000573867 DENND4BO75064 1496 aaPredicted RBP44.3■■■■■ 4.68
SCARF1-207ENST00000573867 RICTORQ6R327 1708 aa44.28■■■■■ 4.68
SCARF1-207ENST00000573867 ARHGAP5Q13017 1502 aa44.26■■■■■ 4.68
SCARF1-207ENST00000573867 EFCAB2Q5VUJ9 269 aa44.26■■■■■ 4.68
SCARF1-207ENST00000573867 ADGRL1O94910 1474 aa44.26■■■■■ 4.68
SCARF1-207ENST00000573867 CDC42BPBQ9Y5S2 1711 aa44.25■■■■■ 4.67
SCARF1-207ENST00000573867 PREX2Q70Z35 1606 aa44.24■■■■■ 4.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms