RNA–Protein interactions for RNA: ENST00000573360.5

TVP23A-207, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 2

Gene TVP23A, Length 3,677 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-207ENST00000573360 ERICH3Q5RHP9 1530 aa21.13■□□□□ 0.97
TVP23A-207ENST00000573360 CCER1Q8TC90 406 aaPredicted RBP21.11■□□□□ 0.97
TVP23A-207ENST00000573360 ZEB1P37275 1124 aaPredicted RBP21.09■□□□□ 0.97
TVP23A-207ENST00000573360 ARHGAP35Q9NRY4 1499 aa21.09■□□□□ 0.97
TVP23A-207ENST00000573360 IFT140Q96RY7 1462 aa21.08■□□□□ 0.97
TVP23A-207ENST00000573360 GRIN2BQ13224 1484 aa21.05■□□□□ 0.96
TVP23A-207ENST00000573360 SNAPC4Q5SXM2 1469 aa21.05■□□□□ 0.96
TVP23A-207ENST00000573360 FAM50AQ14320 339 aaKnown RBP21.03■□□□□ 0.96
TVP23A-207ENST00000573360 WDR62O43379 1518 aa21.01■□□□□ 0.95
TVP23A-207ENST00000573360 TARBP1Q13395 1621 aaKnown RBP21.01■□□□□ 0.95
TVP23A-207ENST00000573360 FHAD1B1AJZ9 1412 aa20.99■□□□□ 0.95
TVP23A-207ENST00000573360 ABCA5Q8WWZ7 1642 aa20.93■□□□□ 0.94
TVP23A-207ENST00000573360 JPH4Q96JJ6 628 aa20.91■□□□□ 0.94
TVP23A-207ENST00000573360 THOC2Q8NI27 1593 aaKnown RBP20.91■□□□□ 0.94
TVP23A-207ENST00000573360 EIF4G3O43432 1585 aaKnown RBP20.88■□□□□ 0.93
TVP23A-207ENST00000573360 CUL7Q14999 1698 aa20.87■□□□□ 0.93
TVP23A-207ENST00000573360 MTUS2Q5JR59 1369 aa20.84■□□□□ 0.93
TVP23A-207ENST00000573360 WDR97A6NE52 1622 aa20.84■□□□□ 0.93
TVP23A-207ENST00000573360 GRIN2AQ12879 1464 aa20.8■□□□□ 0.92
TVP23A-207ENST00000573360 PBRM1Q86U86 1689 aa20.79■□□□□ 0.92
TVP23A-207ENST00000573360 ADAMTS12P58397 1594 aa20.77■□□□□ 0.91
TVP23A-207ENST00000573360 FMN1Q68DA7 1419 aa20.75■□□□□ 0.91
TVP23A-207ENST00000573360 ZNF777Q9ULD5 760 aaPredicted RBP20.75■□□□□ 0.91
TVP23A-207ENST00000573360 SYNJ2O15056 1496 aa20.74■□□□□ 0.91
TVP23A-207ENST00000573360 CHIC2Q9UKJ5 165 aa20.73■□□□□ 0.91
TVP23A-207ENST00000573360 IQGAP2Q13576 1575 aa20.7■□□□□ 0.9
TVP23A-207ENST00000573360 MAGI1Q96QZ7 1491 aaPredicted RBP20.7■□□□□ 0.9
TVP23A-207ENST00000573360 PCF11O94913 1555 aaKnown RBP20.69■□□□□ 0.9
TVP23A-207ENST00000573360 KIAA0586Q9BVV6 1533 aa20.68■□□□□ 0.9
TVP23A-207ENST00000573360 PHLDB1Q86UU1 1377 aa20.67■□□□□ 0.9
TVP23A-207ENST00000573360 KCNH8Q96L42 1107 aa20.66■□□□□ 0.9
TVP23A-207ENST00000573360 CCNB3Q8WWL7 1395 aa20.65■□□□□ 0.9
TVP23A-207ENST00000573360 CTTNBP2Q8WZ74 1663 aa20.65■□□□□ 0.9
TVP23A-207ENST00000573360 CASKIN1Q8WXD9 1431 aa20.63■□□□□ 0.89
TVP23A-207ENST00000573360 CARMIL2Q6F5E8 1435 aa20.62■□□□□ 0.89
TVP23A-207ENST00000573360 PRG4Q92954 1404 aaPredicted RBP20.62■□□□□ 0.89
TVP23A-207ENST00000573360 LRRC9Q6ZRR7 1453 aa20.62■□□□□ 0.89
TVP23A-207ENST00000573360 EFCAB5A4FU69 1503 aa20.61■□□□□ 0.89
TVP23A-207ENST00000573360 CDK11AQ9UQ88 783 aaPredicted RBP20.6■□□□□ 0.89
TVP23A-207ENST00000573360 CDK13Q14004 1512 aaKnown RBP20.59■□□□□ 0.89
TVP23A-207ENST00000573360 PLB1Q6P1J6 1458 aa20.59■□□□□ 0.89
TVP23A-207ENST00000573360 CEP170Q5SW79 1584 aa20.58■□□□□ 0.88
TVP23A-207ENST00000573360 RRP7BPQ9NSQ0 103 aa20.57■□□□□ 0.88
TVP23A-207ENST00000573360 TIAM1Q13009 1591 aa20.57■□□□□ 0.88
TVP23A-207ENST00000573360 PLEKHD1A6NEE1 506 aa20.55■□□□□ 0.88
TVP23A-207ENST00000573360 PTPRGP23470 1445 aa20.55■□□□□ 0.88
TVP23A-207ENST00000573360 FYCO1Q9BQS8 1478 aa20.55■□□□□ 0.88
TVP23A-207ENST00000573360 DISP1Q96F81 1524 aa20.52■□□□□ 0.88
TVP23A-207ENST00000573360 ZNF644Q9H582 1327 aaPredicted RBP20.51■□□□□ 0.87
TVP23A-207ENST00000573360 NEUROD1Q13562 356 aa20.5■□□□□ 0.87
TVP23A-207ENST00000573360 SCAF1Q9H7N4 1312 aaKnown RBP20.49■□□□□ 0.87
TVP23A-207ENST00000573360 OSCARQ8IYS5 282 aa20.48■□□□□ 0.87
TVP23A-207ENST00000573360 NUP160Q12769 1436 aa20.48■□□□□ 0.87
TVP23A-207ENST00000573360 TRIM52Q96A61 297 aa20.47■□□□□ 0.87
TVP23A-207ENST00000573360 CFDP1Q9UEE9 299 aaPredicted RBP20.47■□□□□ 0.87
TVP23A-207ENST00000573360 EPRSP07814 1512 aaKnown RBP20.45■□□□□ 0.86
TVP23A-207ENST00000573360 SAMD9Q5K651 1589 aa20.45■□□□□ 0.86
TVP23A-207ENST00000573360 UGGT2Q9NYU1 1516 aa20.44■□□□□ 0.86
TVP23A-207ENST00000573360 DIEXFQ68CQ4 756 aaKnown RBP20.43■□□□□ 0.86
TVP23A-207ENST00000573360 NCOA2Q15596 1464 aa20.43■□□□□ 0.86
TVP23A-207ENST00000573360 KIAA0556O60303 1618 aa20.42■□□□□ 0.86
TVP23A-207ENST00000573360 MYT1LQ9UL68 1186 aa20.41■□□□□ 0.86
TVP23A-207ENST00000573360 RRBP1Q9P2E9 1410 aaKnown RBP20.38■□□□□ 0.85
TVP23A-207ENST00000573360 CHD1O14646 1710 aa20.38■□□□□ 0.85
TVP23A-207ENST00000573360 NUP153P49790 1475 aaKnown RBP20.38■□□□□ 0.85
TVP23A-207ENST00000573360 RAB3GAP2Q9H2M9 1393 aa20.37■□□□□ 0.85
TVP23A-207ENST00000573360 FGD6Q6ZV73 1430 aa20.36■□□□□ 0.85
TVP23A-207ENST00000573360 ERCC6L2Q5T890 1561 aa20.35■□□□□ 0.85
TVP23A-207ENST00000573360 MAGI3Q5TCQ9 1506 aa20.34■□□□□ 0.85
TVP23A-207ENST00000573360 CYB5RLQ6IPT4 315 aa20.34■□□□□ 0.85
TVP23A-207ENST00000573360 SIN3AQ96ST3 1273 aa20.33■□□□□ 0.84
TVP23A-207ENST00000573360 YTHDC1Q96MU7 727 aaKnown RBP20.32■□□□□ 0.84
TVP23A-207ENST00000573360 HECW1Q76N89 1606 aa20.32■□□□□ 0.84
TVP23A-207ENST00000573360 CCDC18Q5T9S5 1454 aa20.31■□□□□ 0.84
TVP23A-207ENST00000573360 MYOM3Q5VTT5 1437 aa20.31■□□□□ 0.84
TVP23A-207ENST00000573360 HNRNPMP52272 730 aaKnown RBP eCLIP20.31■□□□□ 0.84
TVP23A-207ENST00000573360 NPM1P06748 294 aaKnown RBP eCLIP20.3■□□□□ 0.84
TVP23A-207ENST00000573360 CENPBP07199 599 aaPredicted RBP20.29■□□□□ 0.84
TVP23A-207ENST00000573360 MAP3K1Q13233 1512 aa20.27■□□□□ 0.84
TVP23A-207ENST00000573360 FOXD1Q16676 465 aa20.27■□□□□ 0.84
TVP23A-207ENST00000573360 ACIN1Q9UKV3 1341 aaKnown RBP20.26■□□□□ 0.83
TVP23A-207ENST00000573360 RAPGEF6Q8TEU7 1601 aa20.26■□□□□ 0.83
TVP23A-207ENST00000573360 SETD5Q9C0A6 1442 aa20.25■□□□□ 0.83
TVP23A-207ENST00000573360 ATP10BO94823 1461 aa20.25■□□□□ 0.83
TVP23A-207ENST00000573360 UACAQ9BZF9 1416 aa20.24■□□□□ 0.83
TVP23A-207ENST00000573360 CFAP43Q8NDM7 1665 aa20.24■□□□□ 0.83
TVP23A-207ENST00000573360 EHBP1L1Q8N3D4 1523 aa20.23■□□□□ 0.83
TVP23A-207ENST00000573360 DHX57Q6P158 1386 aaKnown RBP20.23■□□□□ 0.83
TVP23A-207ENST00000573360 PTPRKQ15262 1439 aa20.22■□□□□ 0.83
TVP23A-207ENST00000573360 TROQ12816 1431 aaPredicted RBP20.22■□□□□ 0.83
TVP23A-207ENST00000573360 LRRIQ1Q96JM4 1722 aa20.21■□□□□ 0.83
TVP23A-207ENST00000573360 TSPY4P0CV99 314 aa20.21■□□□□ 0.83
TVP23A-207ENST00000573360 TSPY10P0CW01 314 aa20.21■□□□□ 0.83
TVP23A-207ENST00000573360 GTF3C3Q9Y5Q9 886 aa20.2■□□□□ 0.82
TVP23A-207ENST00000573360 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.19■□□□□ 0.82
TVP23A-207ENST00000573360 ARHGEF11O15085 1522 aa20.19■□□□□ 0.82
TVP23A-207ENST00000573360 SUPT6HQ7KZ85 1726 aaKnown RBP20.18■□□□□ 0.82
TVP23A-207ENST00000573360 PELP1Q8IZL8 1130 aaKnown RBP20.17■□□□□ 0.82
TVP23A-207ENST00000573360 ZNF316A6NFI3 1004 aaPredicted RBP20.14■□□□□ 0.82
TVP23A-207ENST00000573360 HIRIP3Q9BW71 556 aaPredicted RBP20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms