RNA–Protein interactions for RNA: ENST00000572756.5

NDE1-205, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 5

Gene NDE1, Length 915 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-205ENST00000572756 KIAA0586Q9BVV6 1533 aa27.55■■■□□ 2
NDE1-205ENST00000572756 JPH4Q96JJ6 628 aa27.54■■■□□ 2
NDE1-205ENST00000572756 PRG4Q92954 1404 aaPredicted RBP27.52■■■□□ 2
NDE1-205ENST00000572756 RAPGEF2Q9Y4G8 1499 aa27.44■■□□□ 1.98
NDE1-205ENST00000572756 IQGAP2Q13576 1575 aa27.37■■□□□ 1.97
NDE1-205ENST00000572756 PRXQ9BXM0 1461 aa27.33■■□□□ 1.97
NDE1-205ENST00000572756 CTTNBP2Q8WZ74 1663 aa27.24■■□□□ 1.95
NDE1-205ENST00000572756 TRHP20396 242 aaPredicted RBP27.24■■□□□ 1.95
NDE1-205ENST00000572756 UGGT2Q9NYU1 1516 aa27.23■■□□□ 1.95
NDE1-205ENST00000572756 CARMIL2Q6F5E8 1435 aa27.22■■□□□ 1.95
NDE1-205ENST00000572756 DISP1Q96F81 1524 aa27.21■■□□□ 1.95
NDE1-205ENST00000572756 EEA1Q15075 1411 aa27.21■■□□□ 1.95
NDE1-205ENST00000572756 ADCY10Q96PN6 1610 aa27.19■■□□□ 1.94
NDE1-205ENST00000572756 CSRNP3Q8WYN3 585 aa27.18■■□□□ 1.94
NDE1-205ENST00000572756 CHIC1Q5VXU3 224 aa27.17■■□□□ 1.94
NDE1-205ENST00000572756 TNIKQ9UKE5 1360 aa27.17■■□□□ 1.94
NDE1-205ENST00000572756 PTPRGP23470 1445 aa27.16■■□□□ 1.94
NDE1-205ENST00000572756 KIAA0556O60303 1618 aa27.12■■□□□ 1.93
NDE1-205ENST00000572756 MAPKBP1O60336 1514 aa27.06■■□□□ 1.92
NDE1-205ENST00000572756 KIF13AQ9H1H9 1805 aa27.02■■□□□ 1.92
NDE1-205ENST00000572756 UHRF1BP1LA0JNW5 1464 aa27.01■■□□□ 1.91
NDE1-205ENST00000572756 GOLGA3Q08378 1498 aa27.01■■□□□ 1.91
NDE1-205ENST00000572756 TTBK1Q5TCY1 1321 aaPredicted RBP27■■□□□ 1.91
NDE1-205ENST00000572756 NPM1P06748 294 aaKnown RBP eCLIP27■■□□□ 1.91
NDE1-205ENST00000572756 FAM9AQ8IZU1 332 aaPredicted RBP26.99■■□□□ 1.91
NDE1-205ENST00000572756 UACAQ9BZF9 1416 aa26.99■■□□□ 1.91
NDE1-205ENST00000572756 KIF21BO75037 1637 aa26.98■■□□□ 1.91
NDE1-205ENST00000572756 ABCC2Q92887 1545 aa26.98■■□□□ 1.91
NDE1-205ENST00000572756 ABCC10Q5T3U5 1492 aa26.93■■□□□ 1.9
NDE1-205ENST00000572756 DIP2BQ9P265 1576 aa26.91■■□□□ 1.9
NDE1-205ENST00000572756 SAMD9Q5K651 1589 aa26.89■■□□□ 1.9
NDE1-205ENST00000572756 KDM5BQ9UGL1 1544 aa26.88■■□□□ 1.89
NDE1-205ENST00000572756 PLB1Q6P1J6 1458 aa26.86■■□□□ 1.89
NDE1-205ENST00000572756 ABCA8O94911 1581 aa26.85■■□□□ 1.89
NDE1-205ENST00000572756 ZCCHC11Q5TAX3 1644 aaKnown RBP26.83■■□□□ 1.88
NDE1-205ENST00000572756 FAM69CQ0P6D2 419 aa26.82■■□□□ 1.88
NDE1-205ENST00000572756 ASXL2Q76L83 1435 aa26.82■■□□□ 1.88
NDE1-205ENST00000572756 P3H3Q8IVL6 736 aa26.76■■□□□ 1.87
NDE1-205ENST00000572756 GLI2P10070 1586 aa26.72■■□□□ 1.87
NDE1-205ENST00000572756 EFCAB5A4FU69 1503 aa26.7■■□□□ 1.86
NDE1-205ENST00000572756 TSPOAP1O95153 1857 aa26.68■■□□□ 1.86
NDE1-205ENST00000572756 EPRSP07814 1512 aaKnown RBP26.67■■□□□ 1.86
NDE1-205ENST00000572756 FHOD3Q2V2M9 1422 aa26.66■■□□□ 1.86
NDE1-205ENST00000572756 RAPGEF6Q8TEU7 1601 aa26.65■■□□□ 1.86
NDE1-205ENST00000572756 RANGAP1P46060 587 aaPredicted RBP26.65■■□□□ 1.86
NDE1-205ENST00000572756 WDR7Q9Y4E6 1490 aa26.65■■□□□ 1.86
NDE1-205ENST00000572756 UBTFP17480 764 aaKnown RBP26.64■■□□□ 1.86
NDE1-205ENST00000572756 EHMT2Q96KQ7 1210 aa26.63■■□□□ 1.85
NDE1-205ENST00000572756 PPRC1Q5VV67 1664 aaKnown RBP26.62■■□□□ 1.85
NDE1-205ENST00000572756 ATP10BO94823 1461 aa26.61■■□□□ 1.85
NDE1-205ENST00000572756 MAP3K4Q9Y6R4 1608 aa26.6■■□□□ 1.85
NDE1-205ENST00000572756 NUP153P49790 1475 aaKnown RBP26.55■■□□□ 1.84
NDE1-205ENST00000572756 ARHGAP35Q9NRY4 1499 aa26.54■■□□□ 1.84
NDE1-205ENST00000572756 KDM6BO15054 1643 aa26.5■■□□□ 1.83
NDE1-205ENST00000572756 ARID3CA6NKF2 412 aa26.5■■□□□ 1.83
NDE1-205ENST00000572756 CFAP43Q8NDM7 1665 aa26.48■■□□□ 1.83
NDE1-205ENST00000572756 KCNH8Q96L42 1107 aa26.44■■□□□ 1.82
NDE1-205ENST00000572756 TEX14Q8IWB6 1497 aa26.43■■□□□ 1.82
NDE1-205ENST00000572756 FMN1Q68DA7 1419 aa26.42■■□□□ 1.82
NDE1-205ENST00000572756 MAGI3Q5TCQ9 1506 aa26.41■■□□□ 1.82
NDE1-205ENST00000572756 CD109Q6YHK3 1445 aa26.4■■□□□ 1.82
NDE1-205ENST00000572756 ABCA9Q8IUA7 1624 aa26.39■■□□□ 1.81
NDE1-205ENST00000572756 COL17A1Q9UMD9 1497 aaPredicted RBP26.36■■□□□ 1.81
NDE1-205ENST00000572756 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.35■■□□□ 1.81
NDE1-205ENST00000572756 HNRNPUL2Q1KMD3 747 aaKnown RBP26.35■■□□□ 1.81
NDE1-205ENST00000572756 HECW1Q76N89 1606 aa26.35■■□□□ 1.81
NDE1-205ENST00000572756 CDK13Q14004 1512 aaKnown RBP26.34■■□□□ 1.81
NDE1-205ENST00000572756 PLEKHD1A6NEE1 506 aa26.28■■□□□ 1.8
NDE1-205ENST00000572756 LRRIQ1Q96JM4 1722 aa26.27■■□□□ 1.8
NDE1-205ENST00000572756 CLIP1P30622 1438 aa26.26■■□□□ 1.79
NDE1-205ENST00000572756 PCF11O94913 1555 aaKnown RBP26.23■■□□□ 1.79
NDE1-205ENST00000572756 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.21■■□□□ 1.79
NDE1-205ENST00000572756 CASKIN1Q8WXD9 1431 aa26.21■■□□□ 1.79
NDE1-205ENST00000572756 ATP1B4Q9UN42 357 aaPredicted RBP26.19■■□□□ 1.78
NDE1-205ENST00000572756 ARAP3Q8WWN8 1544 aa26.19■■□□□ 1.78
NDE1-205ENST00000572756 TTC37Q6PGP7 1564 aa26.18■■□□□ 1.78
NDE1-205ENST00000572756 NEO1Q92859 1461 aa26.17■■□□□ 1.78
NDE1-205ENST00000572756 PHLDB1Q86UU1 1377 aa26.16■■□□□ 1.78
NDE1-205ENST00000572756 FYCO1Q9BQS8 1478 aa26.15■■□□□ 1.78
NDE1-205ENST00000572756 CCDC18Q5T9S5 1454 aa26.12■■□□□ 1.77
NDE1-205ENST00000572756 CDK11AQ9UQ88 783 aaPredicted RBP26.11■■□□□ 1.77
NDE1-205ENST00000572756 TROQ12816 1431 aaPredicted RBP26.11■■□□□ 1.77
NDE1-205ENST00000572756 CEP162Q5TB80 1403 aa26.11■■□□□ 1.77
NDE1-205ENST00000572756 KIF14Q15058 1648 aa26.09■■□□□ 1.77
NDE1-205ENST00000572756 CFAP74Q9C0B2 1584 aa26.07■■□□□ 1.76
NDE1-205ENST00000572756 FANCAO15360 1455 aa26.05■■□□□ 1.76
NDE1-205ENST00000572756 PLCH2O75038 1416 aa26.04■■□□□ 1.76
NDE1-205ENST00000572756 FRMPD1Q5SYB0 1578 aa26.03■■□□□ 1.76
NDE1-205ENST00000572756 MYO5CQ9NQX4 1742 aa26.03■■□□□ 1.76
NDE1-205ENST00000572756 LOC105371045A0A1W2PR82 267 aa26.03■■□□□ 1.76
NDE1-205ENST00000572756 AKNAQ7Z591 1439 aa26.02■■□□□ 1.76
NDE1-205ENST00000572756 KDM4FA0A1W2PPD8 638 aa26■■□□□ 1.75
NDE1-205ENST00000572756 AEBP2Q6ZN18 517 aaPredicted RBP26■■□□□ 1.75
NDE1-205ENST00000572756 RICTORQ6R327 1708 aa25.99■■□□□ 1.75
NDE1-205ENST00000572756 RAPGEF3O95398 923 aa25.98■■□□□ 1.75
NDE1-205ENST00000572756 DENND4BO75064 1496 aaPredicted RBP25.95■■□□□ 1.74
NDE1-205ENST00000572756 ADGRL1O94910 1474 aa25.92■■□□□ 1.74
NDE1-205ENST00000572756 CDC42BPBQ9Y5S2 1711 aa25.92■■□□□ 1.74
NDE1-205ENST00000572756 PREX2Q70Z35 1606 aa25.9■■□□□ 1.74
NDE1-205ENST00000572756 EFCAB2Q5VUJ9 269 aa25.89■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms