RNA–Protein interactions for RNA: ENST00000572351.1

NPLOC4-208, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-208ENST00000572351 GOLGA3Q08378 1498 aa15.39■□□□□ 0.05
NPLOC4-208ENST00000572351 KIF21BO75037 1637 aa15.38■□□□□ 0.05
NPLOC4-208ENST00000572351 CEP170Q5SW79 1584 aa15.36■□□□□ 0.05
NPLOC4-208ENST00000572351 KIAA0586Q9BVV6 1533 aa15.33■□□□□ 0.05
NPLOC4-208ENST00000572351 CLASP1Q7Z460 1538 aa15.31■□□□□ 0.04
NPLOC4-208ENST00000572351 RANGAP1P46060 587 aaPredicted RBP15.3■□□□□ 0.04
NPLOC4-208ENST00000572351 JPH4Q96JJ6 628 aa15.3■□□□□ 0.04
NPLOC4-208ENST00000572351 LOC105371045A0A1W2PR82 267 aa15.28■□□□□ 0.04
NPLOC4-208ENST00000572351 PLPPR3Q6T4P5 718 aa15.27■□□□□ 0.04
NPLOC4-208ENST00000572351 IQGAP2Q13576 1575 aa15.27■□□□□ 0.03
NPLOC4-208ENST00000572351 DNAJC5Q9H3Z4 198 aa15.24■□□□□ 0.03
NPLOC4-208ENST00000572351 PRG4Q92954 1404 aaPredicted RBP15.24■□□□□ 0.03
NPLOC4-208ENST00000572351 TNIKQ9UKE5 1360 aa15.24■□□□□ 0.03
NPLOC4-208ENST00000572351 CARMIL2Q6F5E8 1435 aa15.22■□□□□ 0.03
NPLOC4-208ENST00000572351 CTTNBP2Q8WZ74 1663 aa15.19■□□□□ 0.02
NPLOC4-208ENST00000572351 UGGT2Q9NYU1 1516 aa15.19■□□□□ 0.02
NPLOC4-208ENST00000572351 P3H3Q8IVL6 736 aa15.18■□□□□ 0.02
NPLOC4-208ENST00000572351 TTBK1Q5TCY1 1321 aaPredicted RBP15.17■□□□□ 0.02
NPLOC4-208ENST00000572351 ARHGEF11O15085 1522 aa15.17■□□□□ 0.02
NPLOC4-208ENST00000572351 SHROOM2Q13796 1616 aa15.17■□□□□ 0.02
NPLOC4-208ENST00000572351 DISP1Q96F81 1524 aa15.14■□□□□ 0.01
NPLOC4-208ENST00000572351 CLIP1P30622 1438 aa15.14■□□□□ 0.01
NPLOC4-208ENST00000572351 ERCC6L2Q5T890 1561 aa15.13■□□□□ 0.01
NPLOC4-208ENST00000572351 CEP162Q5TB80 1403 aa15.12■□□□□ 0.01
NPLOC4-208ENST00000572351 EFCAB5A4FU69 1503 aa15.12■□□□□ 0.01
NPLOC4-208ENST00000572351 PTPRGP23470 1445 aa15.11■□□□□ 0.01
NPLOC4-208ENST00000572351 KIAA0556O60303 1618 aa15.11■□□□□ 0.01
NPLOC4-208ENST00000572351 CYB5RLQ6IPT4 315 aa15.1■□□□□ 0.01
NPLOC4-208ENST00000572351 RIMBP3CA6NJZ7 1639 aa15.1■□□□□ 0.01
NPLOC4-208ENST00000572351 RIMBP3BA6NNM3 1639 aa15.1■□□□□ 0.01
NPLOC4-208ENST00000572351 RIMBP3Q9UFD9 1639 aa15.1■□□□□ 0.01
NPLOC4-208ENST00000572351 FHOD3Q2V2M9 1422 aa15.09■□□□□ 0.01
NPLOC4-208ENST00000572351 ARHGAP35Q9NRY4 1499 aa15.08■□□□□ 0.01
NPLOC4-208ENST00000572351 SAMD9Q5K651 1589 aa15.07■□□□□ 0
NPLOC4-208ENST00000572351 FOXD1Q16676 465 aa15.07■□□□□ 0
NPLOC4-208ENST00000572351 ARAP1Q96P48 1450 aa15.07■□□□□ 0
NPLOC4-208ENST00000572351 FMN1Q68DA7 1419 aa15.01□□□□□ -0.01
NPLOC4-208ENST00000572351 ATP1B4Q9UN42 357 aaPredicted RBP15□□□□□ -0.01
NPLOC4-208ENST00000572351 UACAQ9BZF9 1416 aa15□□□□□ -0.01
NPLOC4-208ENST00000572351 PLB1Q6P1J6 1458 aa14.98□□□□□ -0.01
NPLOC4-208ENST00000572351 NPM1P06748 294 aaKnown RBP eCLIP14.97□□□□□ -0.01
NPLOC4-208ENST00000572351 ARID3CA6NKF2 412 aa14.95□□□□□ -0.02
NPLOC4-208ENST00000572351 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.94□□□□□ -0.02
NPLOC4-208ENST00000572351 HNRNPUL2Q1KMD3 747 aaKnown RBP14.94□□□□□ -0.02
NPLOC4-208ENST00000572351 ABCC2Q92887 1545 aa14.93□□□□□ -0.02
NPLOC4-208ENST00000572351 UHRF1BP1LA0JNW5 1464 aa14.93□□□□□ -0.02
NPLOC4-208ENST00000572351 VPS8Q8N3P4 1428 aa14.92□□□□□ -0.02
NPLOC4-208ENST00000572351 ABCA8O94911 1581 aa14.91□□□□□ -0.02
NPLOC4-208ENST00000572351 CASKIN1Q8WXD9 1431 aa14.91□□□□□ -0.02
NPLOC4-208ENST00000572351 RAPGEF6Q8TEU7 1601 aa14.89□□□□□ -0.03
NPLOC4-208ENST00000572351 NUP153P49790 1475 aaKnown RBP14.88□□□□□ -0.03
NPLOC4-208ENST00000572351 FYCO1Q9BQS8 1478 aa14.88□□□□□ -0.03
NPLOC4-208ENST00000572351 ADCY10Q96PN6 1610 aa14.88□□□□□ -0.03
NPLOC4-208ENST00000572351 PCF11O94913 1555 aaKnown RBP14.86□□□□□ -0.03
NPLOC4-208ENST00000572351 HECW1Q76N89 1606 aa14.86□□□□□ -0.03
NPLOC4-208ENST00000572351 APLP2Q06481 763 aa14.86□□□□□ -0.03
NPLOC4-208ENST00000572351 KDM5BQ9UGL1 1544 aa14.85□□□□□ -0.03
NPLOC4-208ENST00000572351 ATP10BO94823 1461 aa14.83□□□□□ -0.03
NPLOC4-208ENST00000572351 EPRSP07814 1512 aaKnown RBP14.83□□□□□ -0.04
NPLOC4-208ENST00000572351 CDK11AQ9UQ88 783 aaPredicted RBP14.83□□□□□ -0.04
NPLOC4-208ENST00000572351 CCDC18Q5T9S5 1454 aa14.82□□□□□ -0.04
NPLOC4-208ENST00000572351 PLEKHD1A6NEE1 506 aa14.81□□□□□ -0.04
NPLOC4-208ENST00000572351 CDK13Q14004 1512 aaKnown RBP14.8□□□□□ -0.04
NPLOC4-208ENST00000572351 ASXL2Q76L83 1435 aa14.79□□□□□ -0.04
NPLOC4-208ENST00000572351 ZCCHC11Q5TAX3 1644 aaKnown RBP14.78□□□□□ -0.04
NPLOC4-208ENST00000572351 KCNH8Q96L42 1107 aa14.77□□□□□ -0.05
NPLOC4-208ENST00000572351 MAPKBP1O60336 1514 aa14.76□□□□□ -0.05
NPLOC4-208ENST00000572351 WDR7Q9Y4E6 1490 aa14.76□□□□□ -0.05
NPLOC4-208ENST00000572351 TRHP20396 242 aaPredicted RBP14.75□□□□□ -0.05
NPLOC4-208ENST00000572351 MTUS2Q5JR59 1369 aa14.74□□□□□ -0.05
NPLOC4-208ENST00000572351 FAM69CQ0P6D2 419 aa14.72□□□□□ -0.05
NPLOC4-208ENST00000572351 TROQ12816 1431 aaPredicted RBP14.72□□□□□ -0.05
NPLOC4-208ENST00000572351 TIAM1Q13009 1591 aa14.7□□□□□ -0.06
NPLOC4-208ENST00000572351 MAP3K1Q13233 1512 aa14.7□□□□□ -0.06
NPLOC4-208ENST00000572351 KANK4Q5T7N3 995 aaPredicted RBP14.69□□□□□ -0.06
NPLOC4-208ENST00000572351 ABCC10Q5T3U5 1492 aa14.69□□□□□ -0.06
NPLOC4-208ENST00000572351 LRRC9Q6ZRR7 1453 aa14.67□□□□□ -0.06
NPLOC4-208ENST00000572351 EHBP1L1Q8N3D4 1523 aa14.66□□□□□ -0.06
NPLOC4-208ENST00000572351 MAGI3Q5TCQ9 1506 aa14.66□□□□□ -0.06
NPLOC4-208ENST00000572351 CFAP43Q8NDM7 1665 aa14.65□□□□□ -0.06
NPLOC4-208ENST00000572351 PPARGC1BQ86YN6 1023 aaKnown RBP14.65□□□□□ -0.06
NPLOC4-208ENST00000572351 LRRIQ1Q96JM4 1722 aa14.65□□□□□ -0.06
NPLOC4-208ENST00000572351 KIF14Q15058 1648 aa14.63□□□□□ -0.07
NPLOC4-208ENST00000572351 DIP2BQ9P265 1576 aa14.63□□□□□ -0.07
NPLOC4-208ENST00000572351 CD109Q6YHK3 1445 aa14.61□□□□□ -0.07
NPLOC4-208ENST00000572351 CCNB3Q8WWL7 1395 aa14.6□□□□□ -0.07
NPLOC4-208ENST00000572351 GLI2P10070 1586 aa14.6□□□□□ -0.07
NPLOC4-208ENST00000572351 PPP6R1Q9UPN7 881 aa14.6□□□□□ -0.07
NPLOC4-208ENST00000572351 NCOA2Q15596 1464 aa14.59□□□□□ -0.07
NPLOC4-208ENST00000572351 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.59□□□□□ -0.07
NPLOC4-208ENST00000572351 ADRA2BP18089 450 aa14.58□□□□□ -0.08
NPLOC4-208ENST00000572351 TTC37Q6PGP7 1564 aa14.56□□□□□ -0.08
NPLOC4-208ENST00000572351 ABCA9Q8IUA7 1624 aa14.55□□□□□ -0.08
NPLOC4-208ENST00000572351 CFDP1Q9UEE9 299 aaPredicted RBP14.55□□□□□ -0.08
NPLOC4-208ENST00000572351 PLCH2O75038 1416 aa14.55□□□□□ -0.08
NPLOC4-208ENST00000572351 SUPT6HQ7KZ85 1726 aaKnown RBP14.55□□□□□ -0.08
NPLOC4-208ENST00000572351 EFCAB2Q5VUJ9 269 aa14.54□□□□□ -0.08
NPLOC4-208ENST00000572351 ZNF777Q9ULD5 760 aaPredicted RBP14.54□□□□□ -0.08
NPLOC4-208ENST00000572351 TEX14Q8IWB6 1497 aa14.54□□□□□ -0.08
NPLOC4-208ENST00000572351 ARHGAP5Q13017 1502 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms