RNA–Protein interactions for RNA: ENST00000572176.1

ATP2A3-211, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 2

Gene ATP2A3, Length 428 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-211ENST00000572176 IGF1RP08069 1367 aa22.54■■□□□ 1.2
ATP2A3-211ENST00000572176 JPH4Q96JJ6 628 aa22.52■■□□□ 1.2
ATP2A3-211ENST00000572176 KIAA0586Q9BVV6 1533 aa22.47■■□□□ 1.19
ATP2A3-211ENST00000572176 CARMIL1Q5VZK9 1371 aa22.38■■□□□ 1.17
ATP2A3-211ENST00000572176 KIF13AQ9H1H9 1805 aa22.36■■□□□ 1.17
ATP2A3-211ENST00000572176 ADCY10Q96PN6 1610 aa22.35■■□□□ 1.17
ATP2A3-211ENST00000572176 MAPKBP1O60336 1514 aa22.31■■□□□ 1.16
ATP2A3-211ENST00000572176 IQGAP2Q13576 1575 aa22.28■■□□□ 1.16
ATP2A3-211ENST00000572176 ABCC10Q5T3U5 1492 aa22.27■■□□□ 1.16
ATP2A3-211ENST00000572176 DIP2BQ9P265 1576 aa22.24■■□□□ 1.15
ATP2A3-211ENST00000572176 NPM1P06748 294 aaKnown RBP eCLIP22.22■■□□□ 1.15
ATP2A3-211ENST00000572176 CARMIL2Q6F5E8 1435 aa22.22■■□□□ 1.15
ATP2A3-211ENST00000572176 RAPGEF2Q9Y4G8 1499 aa22.22■■□□□ 1.15
ATP2A3-211ENST00000572176 PTPRGP23470 1445 aa22.21■■□□□ 1.15
ATP2A3-211ENST00000572176 TNIKQ9UKE5 1360 aa22.2■■□□□ 1.14
ATP2A3-211ENST00000572176 DISP1Q96F81 1524 aa22.17■■□□□ 1.14
ATP2A3-211ENST00000572176 FAM69CQ0P6D2 419 aa22.16■■□□□ 1.14
ATP2A3-211ENST00000572176 UGGT2Q9NYU1 1516 aa22.16■■□□□ 1.14
ATP2A3-211ENST00000572176 ABCC2Q92887 1545 aa22.14■■□□□ 1.13
ATP2A3-211ENST00000572176 UHRF1BP1LA0JNW5 1464 aa22.11■■□□□ 1.13
ATP2A3-211ENST00000572176 KIAA0556O60303 1618 aa22.09■■□□□ 1.13
ATP2A3-211ENST00000572176 CTTNBP2Q8WZ74 1663 aa22.07■■□□□ 1.12
ATP2A3-211ENST00000572176 TTBK1Q5TCY1 1321 aaPredicted RBP22.07■■□□□ 1.12
ATP2A3-211ENST00000572176 UACAQ9BZF9 1416 aa22.07■■□□□ 1.12
ATP2A3-211ENST00000572176 PRXQ9BXM0 1461 aa22.03■■□□□ 1.12
ATP2A3-211ENST00000572176 ASXL2Q76L83 1435 aa22.03■■□□□ 1.12
ATP2A3-211ENST00000572176 PLB1Q6P1J6 1458 aa22.03■■□□□ 1.12
ATP2A3-211ENST00000572176 KDM5BQ9UGL1 1544 aa22.01■■□□□ 1.11
ATP2A3-211ENST00000572176 TSPOAP1O95153 1857 aa22■■□□□ 1.11
ATP2A3-211ENST00000572176 GLI2P10070 1586 aa22■■□□□ 1.11
ATP2A3-211ENST00000572176 AEBP2Q6ZN18 517 aaPredicted RBP22■■□□□ 1.11
ATP2A3-211ENST00000572176 KDM6BO15054 1643 aa21.99■■□□□ 1.11
ATP2A3-211ENST00000572176 ZCCHC11Q5TAX3 1644 aaKnown RBP21.96■■□□□ 1.11
ATP2A3-211ENST00000572176 GOLGA3Q08378 1498 aa21.95■■□□□ 1.1
ATP2A3-211ENST00000572176 PPRC1Q5VV67 1664 aaKnown RBP21.95■■□□□ 1.1
ATP2A3-211ENST00000572176 EPRSP07814 1512 aaKnown RBP21.91■■□□□ 1.1
ATP2A3-211ENST00000572176 ABCA8O94911 1581 aa21.89■■□□□ 1.09
ATP2A3-211ENST00000572176 MAP3K4Q9Y6R4 1608 aa21.88■■□□□ 1.09
ATP2A3-211ENST00000572176 WDR7Q9Y4E6 1490 aa21.84■■□□□ 1.09
ATP2A3-211ENST00000572176 TEX14Q8IWB6 1497 aa21.79■■□□□ 1.08
ATP2A3-211ENST00000572176 CSRNP3Q8WYN3 585 aa21.79■■□□□ 1.08
ATP2A3-211ENST00000572176 EEA1Q15075 1411 aa21.79■■□□□ 1.08
ATP2A3-211ENST00000572176 SAMD9Q5K651 1589 aa21.78■■□□□ 1.08
ATP2A3-211ENST00000572176 COL17A1Q9UMD9 1497 aaPredicted RBP21.76■■□□□ 1.07
ATP2A3-211ENST00000572176 CFAP43Q8NDM7 1665 aa21.72■■□□□ 1.07
ATP2A3-211ENST00000572176 MAGI3Q5TCQ9 1506 aa21.7■■□□□ 1.06
ATP2A3-211ENST00000572176 KDM4FA0A1W2PPD8 638 aa21.69■■□□□ 1.06
ATP2A3-211ENST00000572176 P3H3Q8IVL6 736 aa21.67■■□□□ 1.06
ATP2A3-211ENST00000572176 ATP10BO94823 1461 aa21.66■■□□□ 1.06
ATP2A3-211ENST00000572176 CD109Q6YHK3 1445 aa21.66■■□□□ 1.06
ATP2A3-211ENST00000572176 RAPGEF6Q8TEU7 1601 aa21.65■■□□□ 1.06
ATP2A3-211ENST00000572176 KIF21BO75037 1637 aa21.64■■□□□ 1.05
ATP2A3-211ENST00000572176 FAM9AQ8IZU1 332 aaPredicted RBP21.62■■□□□ 1.05
ATP2A3-211ENST00000572176 KCNH8Q96L42 1107 aa21.61■■□□□ 1.05
ATP2A3-211ENST00000572176 ADGRL1O94910 1474 aa21.58■■□□□ 1.05
ATP2A3-211ENST00000572176 FHOD3Q2V2M9 1422 aa21.58■■□□□ 1.05
ATP2A3-211ENST00000572176 ARID3CA6NKF2 412 aa21.58■■□□□ 1.05
ATP2A3-211ENST00000572176 ABCA9Q8IUA7 1624 aa21.58■■□□□ 1.04
ATP2A3-211ENST00000572176 NUP153P49790 1475 aaKnown RBP21.58■■□□□ 1.04
ATP2A3-211ENST00000572176 EFCAB5A4FU69 1503 aa21.56■■□□□ 1.04
ATP2A3-211ENST00000572176 ARAP3Q8WWN8 1544 aa21.52■■□□□ 1.04
ATP2A3-211ENST00000572176 RANGAP1P46060 587 aaPredicted RBP21.49■■□□□ 1.03
ATP2A3-211ENST00000572176 PHLDB1Q86UU1 1377 aa21.46■■□□□ 1.03
ATP2A3-211ENST00000572176 CHIC1Q5VXU3 224 aa21.45■■□□□ 1.02
ATP2A3-211ENST00000572176 NEO1Q92859 1461 aa21.45■■□□□ 1.02
ATP2A3-211ENST00000572176 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.43■■□□□ 1.02
ATP2A3-211ENST00000572176 HNRNPUL2Q1KMD3 747 aaKnown RBP21.43■■□□□ 1.02
ATP2A3-211ENST00000572176 FRMPD1Q5SYB0 1578 aa21.38■■□□□ 1.01
ATP2A3-211ENST00000572176 CDK13Q14004 1512 aaKnown RBP21.36■■□□□ 1.01
ATP2A3-211ENST00000572176 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.36■■□□□ 1.01
ATP2A3-211ENST00000572176 ARHGAP35Q9NRY4 1499 aa21.36■■□□□ 1.01
ATP2A3-211ENST00000572176 PLEKHD1A6NEE1 506 aa21.35■■□□□ 1.01
ATP2A3-211ENST00000572176 TTC37Q6PGP7 1564 aa21.35■■□□□ 1.01
ATP2A3-211ENST00000572176 UBTFP17480 764 aaKnown RBP21.34■■□□□ 1.01
ATP2A3-211ENST00000572176 FMN1Q68DA7 1419 aa21.33■■□□□ 1.01
ATP2A3-211ENST00000572176 HECW1Q76N89 1606 aa21.33■■□□□ 1
ATP2A3-211ENST00000572176 CFAP74Q9C0B2 1584 aa21.32■■□□□ 1
ATP2A3-211ENST00000572176 RAPGEF3O95398 923 aa21.31■■□□□ 1
ATP2A3-211ENST00000572176 EHMT2Q96KQ7 1210 aa21.3■■□□□ 1
ATP2A3-211ENST00000572176 FANCAO15360 1455 aa21.3■■□□□ 1
ATP2A3-211ENST00000572176 RICTORQ6R327 1708 aa21.29■■□□□ 1
ATP2A3-211ENST00000572176 HECW2Q9P2P5 1572 aa21.27■■□□□ 1
ATP2A3-211ENST00000572176 ARHGEF40Q8TER5 1519 aa21.27■■□□□ 1
ATP2A3-211ENST00000572176 AKNAQ7Z591 1439 aa21.27■■□□□ 1
ATP2A3-211ENST00000572176 DENND4BO75064 1496 aaPredicted RBP21.26■□□□□ 0.99
ATP2A3-211ENST00000572176 ADAMTSL3P82987 1691 aa21.25■□□□□ 0.99
ATP2A3-211ENST00000572176 ZMYM4Q5VZL5 1548 aa21.24■□□□□ 0.99
ATP2A3-211ENST00000572176 BCORL1Q5H9F3 1711 aa21.21■□□□□ 0.99
ATP2A3-211ENST00000572176 PLCH2O75038 1416 aa21.21■□□□□ 0.99
ATP2A3-211ENST00000572176 LRRIQ1Q96JM4 1722 aa21.2■□□□□ 0.98
ATP2A3-211ENST00000572176 KIF14Q15058 1648 aa21.18■□□□□ 0.98
ATP2A3-211ENST00000572176 MYO5CQ9NQX4 1742 aa21.18■□□□□ 0.98
ATP2A3-211ENST00000572176 PTPRMP28827 1452 aa21.17■□□□□ 0.98
ATP2A3-211ENST00000572176 MADDQ8WXG6 1647 aa21.16■□□□□ 0.98
ATP2A3-211ENST00000572176 TROQ12816 1431 aaPredicted RBP21.16■□□□□ 0.98
ATP2A3-211ENST00000572176 ATP1B4Q9UN42 357 aaPredicted RBP21.16■□□□□ 0.98
ATP2A3-211ENST00000572176 POGZQ7Z3K3 1410 aa21.15■□□□□ 0.98
ATP2A3-211ENST00000572176 PCF11O94913 1555 aaKnown RBP21.14■□□□□ 0.98
ATP2A3-211ENST00000572176 ZFYVE16Q7Z3T8 1539 aa21.14■□□□□ 0.98
ATP2A3-211ENST00000572176 CDK11AQ9UQ88 783 aaPredicted RBP21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms