RNA–Protein interactions for RNA: ENST00000571947.5

TRAPPC1-204, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 306 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-204ENST00000571947 ZNF608Q9ULD9 1512 aaPredicted RBP9.63□□□□□ -0.87
TRAPPC1-204ENST00000571947 AQRO60306 1485 aaKnown RBP eCLIP9.63□□□□□ -0.87
TRAPPC1-204ENST00000571947 ARHGAP35Q9NRY4 1499 aa9.63□□□□□ -0.87
TRAPPC1-204ENST00000571947 PCGF6Q9BYE7 350 aa9.62□□□□□ -0.87
TRAPPC1-204ENST00000571947 EFCAB5A4FU69 1503 aa9.61□□□□□ -0.87
TRAPPC1-204ENST00000571947 FHAD1B1AJZ9 1412 aa9.61□□□□□ -0.87
TRAPPC1-204ENST00000571947 SAMD9Q5K651 1589 aa9.59□□□□□ -0.87
TRAPPC1-204ENST00000571947 RANGAP1P46060 587 aaPredicted RBP9.58□□□□□ -0.88
TRAPPC1-204ENST00000571947 MAGI1Q96QZ7 1491 aaPredicted RBP9.57□□□□□ -0.88
TRAPPC1-204ENST00000571947 IQGAP2Q13576 1575 aa9.56□□□□□ -0.88
TRAPPC1-204ENST00000571947 SNAPC4Q5SXM2 1469 aa9.56□□□□□ -0.88
TRAPPC1-204ENST00000571947 CFAP43Q8NDM7 1665 aa9.55□□□□□ -0.88
TRAPPC1-204ENST00000571947 PPARGC1BQ86YN6 1023 aaKnown RBP9.55□□□□□ -0.88
TRAPPC1-204ENST00000571947 LRRIQ1Q96JM4 1722 aa9.53□□□□□ -0.88
TRAPPC1-204ENST00000571947 MAP3K1Q13233 1512 aa9.53□□□□□ -0.88
TRAPPC1-204ENST00000571947 PCF11O94913 1555 aaKnown RBP9.53□□□□□ -0.88
TRAPPC1-204ENST00000571947 CHD1O14646 1710 aa9.53□□□□□ -0.88
TRAPPC1-204ENST00000571947 GRIN2AQ12879 1464 aa9.53□□□□□ -0.88
TRAPPC1-204ENST00000571947 SYNJ2O15056 1496 aa9.52□□□□□ -0.89
TRAPPC1-204ENST00000571947 TIAM1Q13009 1591 aa9.51□□□□□ -0.89
TRAPPC1-204ENST00000571947 APLP2Q06481 763 aa9.51□□□□□ -0.89
TRAPPC1-204ENST00000571947 UGGT2Q9NYU1 1516 aa9.51□□□□□ -0.89
TRAPPC1-204ENST00000571947 CEP170Q5SW79 1584 aa9.5□□□□□ -0.89
TRAPPC1-204ENST00000571947 FHOD3Q2V2M9 1422 aa9.49□□□□□ -0.89
TRAPPC1-204ENST00000571947 KIAA0586Q9BVV6 1533 aa9.49□□□□□ -0.89
TRAPPC1-204ENST00000571947 FYCO1Q9BQS8 1478 aa9.48□□□□□ -0.89
TRAPPC1-204ENST00000571947 FMN1Q68DA7 1419 aa9.48□□□□□ -0.89
TRAPPC1-204ENST00000571947 CASKIN1Q8WXD9 1431 aa9.47□□□□□ -0.89
TRAPPC1-204ENST00000571947 KIAA0556O60303 1618 aa9.46□□□□□ -0.89
TRAPPC1-204ENST00000571947 P3H3Q8IVL6 736 aa9.45□□□□□ -0.9
TRAPPC1-204ENST00000571947 PPP6R1Q9UPN7 881 aa9.45□□□□□ -0.9
TRAPPC1-204ENST00000571947 TTBK1Q5TCY1 1321 aaPredicted RBP9.45□□□□□ -0.9
TRAPPC1-204ENST00000571947 NUP160Q12769 1436 aa9.45□□□□□ -0.9
TRAPPC1-204ENST00000571947 HECW1Q76N89 1606 aa9.44□□□□□ -0.9
TRAPPC1-204ENST00000571947 MSH5O43196 834 aa9.43□□□□□ -0.9
TRAPPC1-204ENST00000571947 CHMP7Q8WUX9 453 aaPredicted RBP9.43□□□□□ -0.9
TRAPPC1-204ENST00000571947 DISP1Q96F81 1524 aa9.42□□□□□ -0.9
TRAPPC1-204ENST00000571947 LRRC9Q6ZRR7 1453 aa9.42□□□□□ -0.9
TRAPPC1-204ENST00000571947 KANK4Q5T7N3 995 aaPredicted RBP9.42□□□□□ -0.9
TRAPPC1-204ENST00000571947 HRCP23327 699 aa9.41□□□□□ -0.9
TRAPPC1-204ENST00000571947 ADRA2BP18089 450 aa9.4□□□□□ -0.9
TRAPPC1-204ENST00000571947 SHROOM2Q13796 1616 aa9.4□□□□□ -0.9
TRAPPC1-204ENST00000571947 RAPGEF6Q8TEU7 1601 aa9.4□□□□□ -0.9
TRAPPC1-204ENST00000571947 SUPT6HQ7KZ85 1726 aaKnown RBP9.39□□□□□ -0.91
TRAPPC1-204ENST00000571947 PIAS4Q8N2W9 510 aaPredicted RBP9.39□□□□□ -0.91
TRAPPC1-204ENST00000571947 FBLN2P98095 1184 aa9.38□□□□□ -0.91
TRAPPC1-204ENST00000571947 CCDC18Q5T9S5 1454 aa9.38□□□□□ -0.91
TRAPPC1-204ENST00000571947 RRBP1Q9P2E9 1410 aaKnown RBP9.38□□□□□ -0.91
TRAPPC1-204ENST00000571947 EHBP1L1Q8N3D4 1523 aa9.36□□□□□ -0.91
TRAPPC1-204ENST00000571947 CARMIL2Q6F5E8 1435 aa9.35□□□□□ -0.91
TRAPPC1-204ENST00000571947 ATP1B4Q9UN42 357 aaPredicted RBP9.35□□□□□ -0.91
TRAPPC1-204ENST00000571947 EPRSP07814 1512 aaKnown RBP9.35□□□□□ -0.91
TRAPPC1-204ENST00000571947 MAGI3Q5TCQ9 1506 aa9.33□□□□□ -0.92
TRAPPC1-204ENST00000571947 CLASP1Q7Z460 1538 aa9.33□□□□□ -0.92
TRAPPC1-204ENST00000571947 JPH4Q96JJ6 628 aa9.33□□□□□ -0.92
TRAPPC1-204ENST00000571947 ABCA8O94911 1581 aa9.33□□□□□ -0.92
TRAPPC1-204ENST00000571947 CDK13Q14004 1512 aaKnown RBP9.32□□□□□ -0.92
TRAPPC1-204ENST00000571947 ARHGEF11O15085 1522 aa9.31□□□□□ -0.92
TRAPPC1-204ENST00000571947 CCNB3Q8WWL7 1395 aa9.31□□□□□ -0.92
TRAPPC1-204ENST00000571947 NUP153P49790 1475 aaKnown RBP9.31□□□□□ -0.92
TRAPPC1-204ENST00000571947 ADCY10Q96PN6 1610 aa9.31□□□□□ -0.92
TRAPPC1-204ENST00000571947 MTUS2Q5JR59 1369 aa9.3□□□□□ -0.92
TRAPPC1-204ENST00000571947 PHLDB1Q86UU1 1377 aa9.3□□□□□ -0.92
TRAPPC1-204ENST00000571947 ZEB1P37275 1124 aaPredicted RBP9.3□□□□□ -0.92
TRAPPC1-204ENST00000571947 NCOA2Q15596 1464 aa9.29□□□□□ -0.92
TRAPPC1-204ENST00000571947 PRG4Q92954 1404 aaPredicted RBP9.29□□□□□ -0.92
TRAPPC1-204ENST00000571947 HNRNPUL2Q1KMD3 747 aaKnown RBP9.28□□□□□ -0.92
TRAPPC1-204ENST00000571947 ITSN2Q9NZM3 1697 aa9.28□□□□□ -0.92
TRAPPC1-204ENST00000571947 PLB1Q6P1J6 1458 aa9.28□□□□□ -0.92
TRAPPC1-204ENST00000571947 PTPN23Q9H3S7 1636 aa9.27□□□□□ -0.92
TRAPPC1-204ENST00000571947 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.27□□□□□ -0.93
TRAPPC1-204ENST00000571947 ERCC6L2Q5T890 1561 aa9.26□□□□□ -0.93
TRAPPC1-204ENST00000571947 MYOM3Q5VTT5 1437 aa9.26□□□□□ -0.93
TRAPPC1-204ENST00000571947 FGD6Q6ZV73 1430 aa9.26□□□□□ -0.93
TRAPPC1-204ENST00000571947 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.25□□□□□ -0.93
TRAPPC1-204ENST00000571947 CDC42BPAQ5VT25 1732 aa9.25□□□□□ -0.93
TRAPPC1-204ENST00000571947 KIF14Q15058 1648 aa9.23□□□□□ -0.93
TRAPPC1-204ENST00000571947 PTPRGP23470 1445 aa9.23□□□□□ -0.93
TRAPPC1-204ENST00000571947 CCER1Q8TC90 406 aaPredicted RBP9.23□□□□□ -0.93
TRAPPC1-204ENST00000571947 TROQ12816 1431 aaPredicted RBP9.22□□□□□ -0.93
TRAPPC1-204ENST00000571947 TCOF1Q13428 1488 aaKnown RBP9.22□□□□□ -0.93
TRAPPC1-204ENST00000571947 CDK11AQ9UQ88 783 aaPredicted RBP9.22□□□□□ -0.93
TRAPPC1-204ENST00000571947 ATP10BO94823 1461 aa9.21□□□□□ -0.93
TRAPPC1-204ENST00000571947 GCC2Q8IWJ2 1684 aa9.21□□□□□ -0.93
TRAPPC1-204ENST00000571947 MIA2Q96PC5 1412 aa9.21□□□□□ -0.94
TRAPPC1-204ENST00000571947 ABCC2Q92887 1545 aa9.21□□□□□ -0.94
TRAPPC1-204ENST00000571947 FAM50AQ14320 339 aaKnown RBP9.2□□□□□ -0.94
TRAPPC1-204ENST00000571947 UACAQ9BZF9 1416 aa9.2□□□□□ -0.94
TRAPPC1-204ENST00000571947 ZCCHC11Q5TAX3 1644 aaKnown RBP9.2□□□□□ -0.94
TRAPPC1-204ENST00000571947 CROCC2H7BZ55 1655 aa9.2□□□□□ -0.94
TRAPPC1-204ENST00000571947 ARID3CA6NKF2 412 aa9.19□□□□□ -0.94
TRAPPC1-204ENST00000571947 DNMT1P26358 1616 aaKnown RBP9.19□□□□□ -0.94
TRAPPC1-204ENST00000571947 ADGBQ8N7X0 1667 aa9.19□□□□□ -0.94
TRAPPC1-204ENST00000571947 CDC42BPBQ9Y5S2 1711 aa9.19□□□□□ -0.94
TRAPPC1-204ENST00000571947 UHRF1BP1LA0JNW5 1464 aa9.18□□□□□ -0.94
TRAPPC1-204ENST00000571947 MYO5CQ9NQX4 1742 aa9.18□□□□□ -0.94
TRAPPC1-204ENST00000571947 SETD5Q9C0A6 1442 aa9.17□□□□□ -0.94
TRAPPC1-204ENST00000571947 ITGAEP38570 1179 aa9.17□□□□□ -0.94
TRAPPC1-204ENST00000571947 PREX2Q70Z35 1606 aa9.16□□□□□ -0.94
TRAPPC1-204ENST00000571947 ABCC10Q5T3U5 1492 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms