RNA–Protein interactions for RNA: ENST00000571627.5

LITAF-208, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-208ENST00000571627 PRG4Q92954 1404 aaPredicted RBP24.81■■□□□ 1.56
LITAF-208ENST00000571627 JPH4Q96JJ6 628 aa24.79■■□□□ 1.56
LITAF-208ENST00000571627 KIAA0586Q9BVV6 1533 aa24.78■■□□□ 1.56
LITAF-208ENST00000571627 RAPGEF2Q9Y4G8 1499 aa24.7■■□□□ 1.54
LITAF-208ENST00000571627 IQGAP2Q13576 1575 aa24.66■■□□□ 1.54
LITAF-208ENST00000571627 TRHP20396 242 aaPredicted RBP24.64■■□□□ 1.54
LITAF-208ENST00000571627 CTTNBP2Q8WZ74 1663 aa24.57■■□□□ 1.52
LITAF-208ENST00000571627 PRXQ9BXM0 1461 aa24.56■■□□□ 1.52
LITAF-208ENST00000571627 ADCY10Q96PN6 1610 aa24.52■■□□□ 1.52
LITAF-208ENST00000571627 CARMIL2Q6F5E8 1435 aa24.51■■□□□ 1.51
LITAF-208ENST00000571627 DISP1Q96F81 1524 aa24.49■■□□□ 1.51
LITAF-208ENST00000571627 UGGT2Q9NYU1 1516 aa24.49■■□□□ 1.51
LITAF-208ENST00000571627 TTBK1Q5TCY1 1321 aaPredicted RBP24.48■■□□□ 1.51
LITAF-208ENST00000571627 PTPRGP23470 1445 aa24.45■■□□□ 1.51
LITAF-208ENST00000571627 CSRNP3Q8WYN3 585 aa24.45■■□□□ 1.5
LITAF-208ENST00000571627 TNIKQ9UKE5 1360 aa24.44■■□□□ 1.5
LITAF-208ENST00000571627 KIAA0556O60303 1618 aa24.44■■□□□ 1.5
LITAF-208ENST00000571627 CHIC1Q5VXU3 224 aa24.44■■□□□ 1.5
LITAF-208ENST00000571627 EEA1Q15075 1411 aa24.44■■□□□ 1.5
LITAF-208ENST00000571627 FAM9AQ8IZU1 332 aaPredicted RBP24.41■■□□□ 1.5
LITAF-208ENST00000571627 KIF13AQ9H1H9 1805 aa24.38■■□□□ 1.49
LITAF-208ENST00000571627 NPM1P06748 294 aaKnown RBP eCLIP24.35■■□□□ 1.49
LITAF-208ENST00000571627 MAPKBP1O60336 1514 aa24.34■■□□□ 1.49
LITAF-208ENST00000571627 GOLGA3Q08378 1498 aa24.3■■□□□ 1.48
LITAF-208ENST00000571627 UACAQ9BZF9 1416 aa24.29■■□□□ 1.48
LITAF-208ENST00000571627 ABCC2Q92887 1545 aa24.29■■□□□ 1.48
LITAF-208ENST00000571627 KIF21BO75037 1637 aa24.28■■□□□ 1.48
LITAF-208ENST00000571627 UHRF1BP1LA0JNW5 1464 aa24.28■■□□□ 1.48
LITAF-208ENST00000571627 DIP2BQ9P265 1576 aa24.26■■□□□ 1.47
LITAF-208ENST00000571627 ABCC10Q5T3U5 1492 aa24.25■■□□□ 1.47
LITAF-208ENST00000571627 PLB1Q6P1J6 1458 aa24.21■■□□□ 1.47
LITAF-208ENST00000571627 SAMD9Q5K651 1589 aa24.2■■□□□ 1.47
LITAF-208ENST00000571627 FAM69CQ0P6D2 419 aa24.2■■□□□ 1.46
LITAF-208ENST00000571627 ZCCHC11Q5TAX3 1644 aaKnown RBP24.2■■□□□ 1.46
LITAF-208ENST00000571627 P3H3Q8IVL6 736 aa24.18■■□□□ 1.46
LITAF-208ENST00000571627 KDM5BQ9UGL1 1544 aa24.18■■□□□ 1.46
LITAF-208ENST00000571627 ASXL2Q76L83 1435 aa24.17■■□□□ 1.46
LITAF-208ENST00000571627 ABCA8O94911 1581 aa24.16■■□□□ 1.46
LITAF-208ENST00000571627 EHMT2Q96KQ7 1210 aa24.16■■□□□ 1.46
LITAF-208ENST00000571627 RANGAP1P46060 587 aaPredicted RBP24.15■■□□□ 1.46
LITAF-208ENST00000571627 TSPOAP1O95153 1857 aa24.13■■□□□ 1.45
LITAF-208ENST00000571627 FHOD3Q2V2M9 1422 aa24.05■■□□□ 1.44
LITAF-208ENST00000571627 GLI2P10070 1586 aa24.03■■□□□ 1.44
LITAF-208ENST00000571627 UBTFP17480 764 aaKnown RBP24.03■■□□□ 1.44
LITAF-208ENST00000571627 EFCAB5A4FU69 1503 aa24.02■■□□□ 1.44
LITAF-208ENST00000571627 EPRSP07814 1512 aaKnown RBP24.02■■□□□ 1.44
LITAF-208ENST00000571627 RAPGEF6Q8TEU7 1601 aa24.02■■□□□ 1.44
LITAF-208ENST00000571627 WDR7Q9Y4E6 1490 aa24■■□□□ 1.43
LITAF-208ENST00000571627 ARID3CA6NKF2 412 aa24■■□□□ 1.43
LITAF-208ENST00000571627 PPRC1Q5VV67 1664 aaKnown RBP23.99■■□□□ 1.43
LITAF-208ENST00000571627 MAP3K4Q9Y6R4 1608 aa23.97■■□□□ 1.43
LITAF-208ENST00000571627 ATP10BO94823 1461 aa23.95■■□□□ 1.42
LITAF-208ENST00000571627 KDM6BO15054 1643 aa23.92■■□□□ 1.42
LITAF-208ENST00000571627 NUP153P49790 1475 aaKnown RBP23.91■■□□□ 1.42
LITAF-208ENST00000571627 ARHGAP35Q9NRY4 1499 aa23.88■■□□□ 1.41
LITAF-208ENST00000571627 KCNH8Q96L42 1107 aa23.88■■□□□ 1.41
LITAF-208ENST00000571627 CFAP43Q8NDM7 1665 aa23.86■■□□□ 1.41
LITAF-208ENST00000571627 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.82■■□□□ 1.4
LITAF-208ENST00000571627 HNRNPUL2Q1KMD3 747 aaKnown RBP23.82■■□□□ 1.4
LITAF-208ENST00000571627 TEX14Q8IWB6 1497 aa23.81■■□□□ 1.4
LITAF-208ENST00000571627 CD109Q6YHK3 1445 aa23.79■■□□□ 1.4
LITAF-208ENST00000571627 FMN1Q68DA7 1419 aa23.76■■□□□ 1.39
LITAF-208ENST00000571627 CDK13Q14004 1512 aaKnown RBP23.76■■□□□ 1.39
LITAF-208ENST00000571627 ABCA9Q8IUA7 1624 aa23.76■■□□□ 1.39
LITAF-208ENST00000571627 COL17A1Q9UMD9 1497 aaPredicted RBP23.75■■□□□ 1.39
LITAF-208ENST00000571627 MAGI3Q5TCQ9 1506 aa23.74■■□□□ 1.39
LITAF-208ENST00000571627 HECW1Q76N89 1606 aa23.74■■□□□ 1.39
LITAF-208ENST00000571627 ATP1B4Q9UN42 357 aaPredicted RBP23.7■■□□□ 1.38
LITAF-208ENST00000571627 LRRIQ1Q96JM4 1722 aa23.7■■□□□ 1.38
LITAF-208ENST00000571627 PCF11O94913 1555 aaKnown RBP23.66■■□□□ 1.38
LITAF-208ENST00000571627 PLEKHD1A6NEE1 506 aa23.66■■□□□ 1.38
LITAF-208ENST00000571627 CLIP1P30622 1438 aa23.66■■□□□ 1.38
LITAF-208ENST00000571627 TTC37Q6PGP7 1564 aa23.62■■□□□ 1.37
LITAF-208ENST00000571627 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.61■■□□□ 1.37
LITAF-208ENST00000571627 CASKIN1Q8WXD9 1431 aa23.58■■□□□ 1.36
LITAF-208ENST00000571627 ARAP3Q8WWN8 1544 aa23.55■■□□□ 1.36
LITAF-208ENST00000571627 KIF14Q15058 1648 aa23.55■■□□□ 1.36
LITAF-208ENST00000571627 NEO1Q92859 1461 aa23.54■■□□□ 1.36
LITAF-208ENST00000571627 AEBP2Q6ZN18 517 aaPredicted RBP23.53■■□□□ 1.36
LITAF-208ENST00000571627 FYCO1Q9BQS8 1478 aa23.53■■□□□ 1.36
LITAF-208ENST00000571627 CEP162Q5TB80 1403 aa23.51■■□□□ 1.35
LITAF-208ENST00000571627 CCDC18Q5T9S5 1454 aa23.5■■□□□ 1.35
LITAF-208ENST00000571627 CDK11AQ9UQ88 783 aaPredicted RBP23.5■■□□□ 1.35
LITAF-208ENST00000571627 TROQ12816 1431 aaPredicted RBP23.5■■□□□ 1.35
LITAF-208ENST00000571627 PHLDB1Q86UU1 1377 aa23.49■■□□□ 1.35
LITAF-208ENST00000571627 FANCAO15360 1455 aa23.49■■□□□ 1.35
LITAF-208ENST00000571627 CFAP74Q9C0B2 1584 aa23.48■■□□□ 1.35
LITAF-208ENST00000571627 MYO5CQ9NQX4 1742 aa23.48■■□□□ 1.35
LITAF-208ENST00000571627 LOC105371045A0A1W2PR82 267 aa23.48■■□□□ 1.35
LITAF-208ENST00000571627 FRMPD1Q5SYB0 1578 aa23.47■■□□□ 1.35
LITAF-208ENST00000571627 KDM4FA0A1W2PPD8 638 aa23.44■■□□□ 1.34
LITAF-208ENST00000571627 RAPGEF3O95398 923 aa23.44■■□□□ 1.34
LITAF-208ENST00000571627 AKNAQ7Z591 1439 aa23.43■■□□□ 1.34
LITAF-208ENST00000571627 PLCH2O75038 1416 aa23.42■■□□□ 1.34
LITAF-208ENST00000571627 RICTORQ6R327 1708 aa23.42■■□□□ 1.34
LITAF-208ENST00000571627 ADGRL1O94910 1474 aa23.41■■□□□ 1.34
LITAF-208ENST00000571627 DENND4BO75064 1496 aaPredicted RBP23.38■■□□□ 1.33
LITAF-208ENST00000571627 CDC42BPBQ9Y5S2 1711 aa23.36■■□□□ 1.33
LITAF-208ENST00000571627 ARHGAP5Q13017 1502 aa23.35■■□□□ 1.33
LITAF-208ENST00000571627 PREX2Q70Z35 1606 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms