RNA–Protein interactions for RNA: ENST00000571277.1

LITAF-206, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-206ENST00000571277 CUL7Q14999 1698 aa19.84■□□□□ 0.77
LITAF-206ENST00000571277 JPH4Q96JJ6 628 aa19.83■□□□□ 0.77
LITAF-206ENST00000571277 KIAA0586Q9BVV6 1533 aa19.77■□□□□ 0.76
LITAF-206ENST00000571277 CARMIL1Q5VZK9 1371 aa19.72■□□□□ 0.75
LITAF-206ENST00000571277 ADCY10Q96PN6 1610 aa19.65■□□□□ 0.74
LITAF-206ENST00000571277 KIF13AQ9H1H9 1805 aa19.64■□□□□ 0.73
LITAF-206ENST00000571277 IQGAP2Q13576 1575 aa19.6■□□□□ 0.73
LITAF-206ENST00000571277 MAPKBP1O60336 1514 aa19.59■□□□□ 0.73
LITAF-206ENST00000571277 RAPGEF2Q9Y4G8 1499 aa19.55■□□□□ 0.72
LITAF-206ENST00000571277 ABCC10Q5T3U5 1492 aa19.54■□□□□ 0.72
LITAF-206ENST00000571277 PTPRGP23470 1445 aa19.53■□□□□ 0.72
LITAF-206ENST00000571277 CARMIL2Q6F5E8 1435 aa19.52■□□□□ 0.72
LITAF-206ENST00000571277 DISP1Q96F81 1524 aa19.52■□□□□ 0.72
LITAF-206ENST00000571277 DIP2BQ9P265 1576 aa19.52■□□□□ 0.71
LITAF-206ENST00000571277 NPM1P06748 294 aaKnown RBP eCLIP19.51■□□□□ 0.71
LITAF-206ENST00000571277 TNIKQ9UKE5 1360 aa19.51■□□□□ 0.71
LITAF-206ENST00000571277 UGGT2Q9NYU1 1516 aa19.49■□□□□ 0.71
LITAF-206ENST00000571277 FAM69CQ0P6D2 419 aa19.47■□□□□ 0.71
LITAF-206ENST00000571277 ABCC2Q92887 1545 aa19.45■□□□□ 0.7
LITAF-206ENST00000571277 UHRF1BP1LA0JNW5 1464 aa19.43■□□□□ 0.7
LITAF-206ENST00000571277 TTBK1Q5TCY1 1321 aaPredicted RBP19.43■□□□□ 0.7
LITAF-206ENST00000571277 CTTNBP2Q8WZ74 1663 aa19.43■□□□□ 0.7
LITAF-206ENST00000571277 PRXQ9BXM0 1461 aa19.42■□□□□ 0.7
LITAF-206ENST00000571277 KIAA0556O60303 1618 aa19.42■□□□□ 0.7
LITAF-206ENST00000571277 UACAQ9BZF9 1416 aa19.4■□□□□ 0.7
LITAF-206ENST00000571277 ASXL2Q76L83 1435 aa19.36■□□□□ 0.69
LITAF-206ENST00000571277 KDM5BQ9UGL1 1544 aa19.35■□□□□ 0.69
LITAF-206ENST00000571277 TSPOAP1O95153 1857 aa19.34■□□□□ 0.69
LITAF-206ENST00000571277 PLB1Q6P1J6 1458 aa19.34■□□□□ 0.69
LITAF-206ENST00000571277 GLI2P10070 1586 aa19.32■□□□□ 0.68
LITAF-206ENST00000571277 ZCCHC11Q5TAX3 1644 aaKnown RBP19.31■□□□□ 0.68
LITAF-206ENST00000571277 GOLGA3Q08378 1498 aa19.29■□□□□ 0.68
LITAF-206ENST00000571277 PPRC1Q5VV67 1664 aaKnown RBP19.29■□□□□ 0.68
LITAF-206ENST00000571277 KDM6BO15054 1643 aa19.29■□□□□ 0.68
LITAF-206ENST00000571277 EPRSP07814 1512 aaKnown RBP19.25■□□□□ 0.67
LITAF-206ENST00000571277 ABCA8O94911 1581 aa19.25■□□□□ 0.67
LITAF-206ENST00000571277 AEBP2Q6ZN18 517 aaPredicted RBP19.24■□□□□ 0.67
LITAF-206ENST00000571277 CSRNP3Q8WYN3 585 aa19.24■□□□□ 0.67
LITAF-206ENST00000571277 MAP3K4Q9Y6R4 1608 aa19.22■□□□□ 0.67
LITAF-206ENST00000571277 EEA1Q15075 1411 aa19.19■□□□□ 0.66
LITAF-206ENST00000571277 WDR7Q9Y4E6 1490 aa19.19■□□□□ 0.66
LITAF-206ENST00000571277 SAMD9Q5K651 1589 aa19.17■□□□□ 0.66
LITAF-206ENST00000571277 COL17A1Q9UMD9 1497 aaPredicted RBP19.14■□□□□ 0.65
LITAF-206ENST00000571277 P3H3Q8IVL6 736 aa19.11■□□□□ 0.65
LITAF-206ENST00000571277 TEX14Q8IWB6 1497 aa19.1■□□□□ 0.65
LITAF-206ENST00000571277 CFAP43Q8NDM7 1665 aa19.08■□□□□ 0.65
LITAF-206ENST00000571277 ATP10BO94823 1461 aa19.08■□□□□ 0.64
LITAF-206ENST00000571277 KIF21BO75037 1637 aa19.07■□□□□ 0.64
LITAF-206ENST00000571277 FAM9AQ8IZU1 332 aaPredicted RBP19.06■□□□□ 0.64
LITAF-206ENST00000571277 MAGI3Q5TCQ9 1506 aa19.05■□□□□ 0.64
LITAF-206ENST00000571277 KDM4FA0A1W2PPD8 638 aa19.05■□□□□ 0.64
LITAF-206ENST00000571277 RAPGEF6Q8TEU7 1601 aa19.04■□□□□ 0.64
LITAF-206ENST00000571277 CD109Q6YHK3 1445 aa19.04■□□□□ 0.64
LITAF-206ENST00000571277 KCNH8Q96L42 1107 aa19.04■□□□□ 0.64
LITAF-206ENST00000571277 ARID3CA6NKF2 412 aa19.01■□□□□ 0.63
LITAF-206ENST00000571277 CHIC1Q5VXU3 224 aa19■□□□□ 0.63
LITAF-206ENST00000571277 NUP153P49790 1475 aaKnown RBP19■□□□□ 0.63
LITAF-206ENST00000571277 FHOD3Q2V2M9 1422 aa19■□□□□ 0.63
LITAF-206ENST00000571277 ABCA9Q8IUA7 1624 aa18.97■□□□□ 0.63
LITAF-206ENST00000571277 RANGAP1P46060 587 aaPredicted RBP18.97■□□□□ 0.63
LITAF-206ENST00000571277 EFCAB5A4FU69 1503 aa18.96■□□□□ 0.63
LITAF-206ENST00000571277 ADGRL1O94910 1474 aa18.93■□□□□ 0.62
LITAF-206ENST00000571277 ARAP3Q8WWN8 1544 aa18.91■□□□□ 0.62
LITAF-206ENST00000571277 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.86■□□□□ 0.61
LITAF-206ENST00000571277 HNRNPUL2Q1KMD3 747 aaKnown RBP18.86■□□□□ 0.61
LITAF-206ENST00000571277 PHLDB1Q86UU1 1377 aa18.84■□□□□ 0.61
LITAF-206ENST00000571277 NEO1Q92859 1461 aa18.84■□□□□ 0.61
LITAF-206ENST00000571277 UBTFP17480 764 aaKnown RBP18.83■□□□□ 0.6
LITAF-206ENST00000571277 EHMT2Q96KQ7 1210 aa18.83■□□□□ 0.6
LITAF-206ENST00000571277 ARHGAP35Q9NRY4 1499 aa18.83■□□□□ 0.6
LITAF-206ENST00000571277 CDK13Q14004 1512 aaKnown RBP18.81■□□□□ 0.6
LITAF-206ENST00000571277 PLEKHD1A6NEE1 506 aa18.8■□□□□ 0.6
LITAF-206ENST00000571277 FRMPD1Q5SYB0 1578 aa18.8■□□□□ 0.6
LITAF-206ENST00000571277 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.79■□□□□ 0.6
LITAF-206ENST00000571277 TTC37Q6PGP7 1564 aa18.77■□□□□ 0.6
LITAF-206ENST00000571277 FMN1Q68DA7 1419 aa18.77■□□□□ 0.6
LITAF-206ENST00000571277 RAPGEF3O95398 923 aa18.77■□□□□ 0.6
LITAF-206ENST00000571277 HECW1Q76N89 1606 aa18.75■□□□□ 0.59
LITAF-206ENST00000571277 FANCAO15360 1455 aa18.72■□□□□ 0.59
LITAF-206ENST00000571277 RICTORQ6R327 1708 aa18.72■□□□□ 0.59
LITAF-206ENST00000571277 CFAP74Q9C0B2 1584 aa18.72■□□□□ 0.59
LITAF-206ENST00000571277 AKNAQ7Z591 1439 aa18.7■□□□□ 0.58
LITAF-206ENST00000571277 LRRIQ1Q96JM4 1722 aa18.7■□□□□ 0.58
LITAF-206ENST00000571277 DENND4BO75064 1496 aaPredicted RBP18.68■□□□□ 0.58
LITAF-206ENST00000571277 ARHGEF40Q8TER5 1519 aa18.66■□□□□ 0.58
LITAF-206ENST00000571277 ADAMTSL3P82987 1691 aa18.66■□□□□ 0.58
LITAF-206ENST00000571277 PLCH2O75038 1416 aa18.66■□□□□ 0.58
LITAF-206ENST00000571277 KIF14Q15058 1648 aa18.65■□□□□ 0.58
LITAF-206ENST00000571277 ATP1B4Q9UN42 357 aaPredicted RBP18.65■□□□□ 0.58
LITAF-206ENST00000571277 ZMYM4Q5VZL5 1548 aa18.64■□□□□ 0.58
LITAF-206ENST00000571277 HECW2Q9P2P5 1572 aa18.64■□□□□ 0.58
LITAF-206ENST00000571277 TROQ12816 1431 aaPredicted RBP18.63■□□□□ 0.57
LITAF-206ENST00000571277 PCF11O94913 1555 aaKnown RBP18.63■□□□□ 0.57
LITAF-206ENST00000571277 MYO5CQ9NQX4 1742 aa18.63■□□□□ 0.57
LITAF-206ENST00000571277 BCORL1Q5H9F3 1711 aa18.62■□□□□ 0.57
LITAF-206ENST00000571277 CDK11AQ9UQ88 783 aaPredicted RBP18.61■□□□□ 0.57
LITAF-206ENST00000571277 CASKIN1Q8WXD9 1431 aa18.6■□□□□ 0.57
LITAF-206ENST00000571277 POGZQ7Z3K3 1410 aa18.58■□□□□ 0.57
LITAF-206ENST00000571277 SCAPERQ9BY12 1400 aa18.58■□□□□ 0.57
LITAF-206ENST00000571277 SIGLEC1Q9BZZ2 1709 aa18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms