RNA–Protein interactions for RNA: ENST00000570979.1

SPNS2-203, Transcript of sphingolipid transporter 2, humanhuman

TSL 1 (best)

Gene SPNS2, Length 1,768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS2-203ENST00000570979 SHROOM2Q13796 1616 aa31■■■□□ 2.55
SPNS2-203ENST00000570979 CUL7Q14999 1698 aa30.9■■■□□ 2.54
SPNS2-203ENST00000570979 RUSC2Q8N2Y8 1516 aa30.9■■■□□ 2.54
SPNS2-203ENST00000570979 JPH4Q96JJ6 628 aa30.89■■■□□ 2.54
SPNS2-203ENST00000570979 TRHP20396 242 aaPredicted RBP30.89■■■□□ 2.54
SPNS2-203ENST00000570979 TRIM26Q12899 539 aaPredicted RBP30.88■■■□□ 2.53
SPNS2-203ENST00000570979 PCGF6Q9BYE7 350 aa30.88■■■□□ 2.53
SPNS2-203ENST00000570979 PRG4Q92954 1404 aaPredicted RBP30.87■■■□□ 2.53
SPNS2-203ENST00000570979 CARMIL1Q5VZK9 1371 aa30.84■■■□□ 2.53
SPNS2-203ENST00000570979 CSRNP3Q8WYN3 585 aa30.83■■■□□ 2.53
SPNS2-203ENST00000570979 KIAA0586Q9BVV6 1533 aa30.77■■■□□ 2.52
SPNS2-203ENST00000570979 TNIKQ9UKE5 1360 aa30.71■■■□□ 2.51
SPNS2-203ENST00000570979 GOLGA3Q08378 1498 aa30.64■■■□□ 2.5
SPNS2-203ENST00000570979 HRCP23327 699 aa30.63■■■□□ 2.49
SPNS2-203ENST00000570979 EHMT2Q96KQ7 1210 aa30.61■■■□□ 2.49
SPNS2-203ENST00000570979 RAPGEF2Q9Y4G8 1499 aa30.58■■■□□ 2.49
SPNS2-203ENST00000570979 KIF21BO75037 1637 aa30.57■■■□□ 2.48
SPNS2-203ENST00000570979 IQGAP2Q13576 1575 aa30.53■■■□□ 2.48
SPNS2-203ENST00000570979 CEP162Q5TB80 1403 aa30.49■■■□□ 2.47
SPNS2-203ENST00000570979 UBTFP17480 764 aaKnown RBP30.49■■■□□ 2.47
SPNS2-203ENST00000570979 ADCY10Q96PN6 1610 aa30.48■■■□□ 2.47
SPNS2-203ENST00000570979 TTBK1Q5TCY1 1321 aaPredicted RBP30.43■■■□□ 2.46
SPNS2-203ENST00000570979 PTPRGP23470 1445 aa30.43■■■□□ 2.46
SPNS2-203ENST00000570979 CARMIL2Q6F5E8 1435 aa30.42■■■□□ 2.46
SPNS2-203ENST00000570979 DISP1Q96F81 1524 aa30.41■■■□□ 2.46
SPNS2-203ENST00000570979 PRXQ9BXM0 1461 aa30.39■■■□□ 2.46
SPNS2-203ENST00000570979 UGGT2Q9NYU1 1516 aa30.36■■■□□ 2.45
SPNS2-203ENST00000570979 KIF13AQ9H1H9 1805 aa30.36■■■□□ 2.45
SPNS2-203ENST00000570979 NPM1P06748 294 aaKnown RBP eCLIP30.36■■■□□ 2.45
SPNS2-203ENST00000570979 MAPKBP1O60336 1514 aa30.32■■■□□ 2.44
SPNS2-203ENST00000570979 CTTNBP2Q8WZ74 1663 aa30.3■■■□□ 2.44
SPNS2-203ENST00000570979 KIAA0556O60303 1618 aa30.27■■■□□ 2.44
SPNS2-203ENST00000570979 ABCC10Q5T3U5 1492 aa30.26■■■□□ 2.43
SPNS2-203ENST00000570979 FAM69CQ0P6D2 419 aa30.23■■■□□ 2.43
SPNS2-203ENST00000570979 DIP2BQ9P265 1576 aa30.21■■■□□ 2.43
SPNS2-203ENST00000570979 ABCC2Q92887 1545 aa30.21■■■□□ 2.43
SPNS2-203ENST00000570979 UACAQ9BZF9 1416 aa30.21■■■□□ 2.43
SPNS2-203ENST00000570979 ZEB1P37275 1124 aaPredicted RBP30.2■■■□□ 2.43
SPNS2-203ENST00000570979 UHRF1BP1LA0JNW5 1464 aa30.19■■■□□ 2.42
SPNS2-203ENST00000570979 CLIP1P30622 1438 aa30.14■■■□□ 2.42
SPNS2-203ENST00000570979 ASXL2Q76L83 1435 aa30.08■■■□□ 2.41
SPNS2-203ENST00000570979 KDM5BQ9UGL1 1544 aa30.06■■■□□ 2.4
SPNS2-203ENST00000570979 PLB1Q6P1J6 1458 aa30.05■■■□□ 2.4
SPNS2-203ENST00000570979 ZCCHC11Q5TAX3 1644 aaKnown RBP30.01■■■□□ 2.39
SPNS2-203ENST00000570979 TSPOAP1O95153 1857 aa30.01■■■□□ 2.39
SPNS2-203ENST00000570979 P3H3Q8IVL6 736 aa29.99■■■□□ 2.39
SPNS2-203ENST00000570979 VPS8Q8N3P4 1428 aa29.99■■■□□ 2.39
SPNS2-203ENST00000570979 ABCA8O94911 1581 aa29.98■■■□□ 2.39
SPNS2-203ENST00000570979 GLI2P10070 1586 aa29.92■■■□□ 2.38
SPNS2-203ENST00000570979 APLP2Q06481 763 aa29.92■■■□□ 2.38
SPNS2-203ENST00000570979 SAMD9Q5K651 1589 aa29.91■■■□□ 2.38
SPNS2-203ENST00000570979 EPRSP07814 1512 aaKnown RBP29.9■■■□□ 2.38
SPNS2-203ENST00000570979 RANGAP1P46060 587 aaPredicted RBP29.87■■■□□ 2.37
SPNS2-203ENST00000570979 PPARGC1BQ86YN6 1023 aaKnown RBP29.87■■■□□ 2.37
SPNS2-203ENST00000570979 PPRC1Q5VV67 1664 aaKnown RBP29.86■■■□□ 2.37
SPNS2-203ENST00000570979 WDR7Q9Y4E6 1490 aa29.83■■■□□ 2.37
SPNS2-203ENST00000570979 KDM6BO15054 1643 aa29.82■■■□□ 2.36
SPNS2-203ENST00000570979 ARID3CA6NKF2 412 aa29.8■■■□□ 2.36
SPNS2-203ENST00000570979 MAP3K4Q9Y6R4 1608 aa29.79■■■□□ 2.36
SPNS2-203ENST00000570979 FHOD3Q2V2M9 1422 aa29.76■■■□□ 2.36
SPNS2-203ENST00000570979 PELP1Q8IZL8 1130 aaKnown RBP29.76■■■□□ 2.35
SPNS2-203ENST00000570979 ATP10BO94823 1461 aa29.75■■■□□ 2.35
SPNS2-203ENST00000570979 KCNH8Q96L42 1107 aa29.73■■■□□ 2.35
SPNS2-203ENST00000570979 RAPGEF6Q8TEU7 1601 aa29.71■■■□□ 2.35
SPNS2-203ENST00000570979 COL17A1Q9UMD9 1497 aaPredicted RBP29.67■■■□□ 2.34
SPNS2-203ENST00000570979 EFCAB5A4FU69 1503 aa29.64■■■□□ 2.33
SPNS2-203ENST00000570979 NUP153P49790 1475 aaKnown RBP29.64■■■□□ 2.33
SPNS2-203ENST00000570979 AEBP2Q6ZN18 517 aaPredicted RBP29.63■■■□□ 2.33
SPNS2-203ENST00000570979 TEX14Q8IWB6 1497 aa29.62■■■□□ 2.33
SPNS2-203ENST00000570979 CD109Q6YHK3 1445 aa29.62■■■□□ 2.33
SPNS2-203ENST00000570979 CFAP43Q8NDM7 1665 aa29.6■■■□□ 2.33
SPNS2-203ENST00000570979 MAGI3Q5TCQ9 1506 aa29.56■■■□□ 2.32
SPNS2-203ENST00000570979 ARHGAP35Q9NRY4 1499 aa29.55■■■□□ 2.32
SPNS2-203ENST00000570979 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.54■■■□□ 2.32
SPNS2-203ENST00000570979 HNRNPUL2Q1KMD3 747 aaKnown RBP29.54■■■□□ 2.32
SPNS2-203ENST00000570979 CCER1Q8TC90 406 aaPredicted RBP29.5■■■□□ 2.31
SPNS2-203ENST00000570979 ABCA9Q8IUA7 1624 aa29.47■■■□□ 2.31
SPNS2-203ENST00000570979 MAP3K1Q13233 1512 aa29.45■■■□□ 2.31
SPNS2-203ENST00000570979 KDM4FA0A1W2PPD8 638 aa29.44■■■□□ 2.3
SPNS2-203ENST00000570979 CDK13Q14004 1512 aaKnown RBP29.41■■■□□ 2.3
SPNS2-203ENST00000570979 PLEKHD1A6NEE1 506 aa29.39■■■□□ 2.29
SPNS2-203ENST00000570979 FMN1Q68DA7 1419 aa29.37■■■□□ 2.29
SPNS2-203ENST00000570979 ATP1B4Q9UN42 357 aaPredicted RBP29.33■■■□□ 2.29
SPNS2-203ENST00000570979 ARAP3Q8WWN8 1544 aa29.33■■■□□ 2.29
SPNS2-203ENST00000570979 HECW1Q76N89 1606 aa29.3■■■□□ 2.28
SPNS2-203ENST00000570979 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.28■■■□□ 2.28
SPNS2-203ENST00000570979 NEO1Q92859 1461 aa29.26■■■□□ 2.27
SPNS2-203ENST00000570979 TTC37Q6PGP7 1564 aa29.25■■■□□ 2.27
SPNS2-203ENST00000570979 PHLDB1Q86UU1 1377 aa29.25■■■□□ 2.27
SPNS2-203ENST00000570979 ADGRL1O94910 1474 aa29.25■■■□□ 2.27
SPNS2-203ENST00000570979 RAPGEF3O95398 923 aa29.23■■■□□ 2.27
SPNS2-203ENST00000570979 LRRIQ1Q96JM4 1722 aa29.22■■■□□ 2.27
SPNS2-203ENST00000570979 RRBP1Q9P2E9 1410 aaKnown RBP29.21■■■□□ 2.27
SPNS2-203ENST00000570979 TIAM1Q13009 1591 aa29.21■■■□□ 2.27
SPNS2-203ENST00000570979 KANK4Q5T7N3 995 aaPredicted RBP29.18■■■□□ 2.26
SPNS2-203ENST00000570979 FRMPD1Q5SYB0 1578 aa29.17■■■□□ 2.26
SPNS2-203ENST00000570979 FYCO1Q9BQS8 1478 aa29.16■■■□□ 2.26
SPNS2-203ENST00000570979 PCF11O94913 1555 aaKnown RBP29.16■■■□□ 2.26
SPNS2-203ENST00000570979 FANCAO15360 1455 aa29.15■■■□□ 2.26
SPNS2-203ENST00000570979 AKNAQ7Z591 1439 aa29.14■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms