RNA–Protein interactions for RNA: ENST00000570904.5

LITAF-205, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-205ENST00000570904 JPH4Q96JJ6 628 aa35.89■■■■□ 3.34
LITAF-205ENST00000570904 CUL7Q14999 1698 aa35.86■■■■□ 3.33
LITAF-205ENST00000570904 KIAA0586Q9BVV6 1533 aa35.73■■■■□ 3.31
LITAF-205ENST00000570904 CARMIL1Q5VZK9 1371 aa35.73■■■■□ 3.31
LITAF-205ENST00000570904 ADCY10Q96PN6 1610 aa35.46■■■■□ 3.27
LITAF-205ENST00000570904 IQGAP2Q13576 1575 aa35.44■■■■□ 3.26
LITAF-205ENST00000570904 RAPGEF2Q9Y4G8 1499 aa35.42■■■■□ 3.26
LITAF-205ENST00000570904 NPM1P06748 294 aaKnown RBP eCLIP35.41■■■■□ 3.26
LITAF-205ENST00000570904 KIF13AQ9H1H9 1805 aa35.39■■■■□ 3.26
LITAF-205ENST00000570904 TTBK1Q5TCY1 1321 aaPredicted RBP35.37■■■■□ 3.25
LITAF-205ENST00000570904 PTPRGP23470 1445 aa35.37■■■■□ 3.25
LITAF-205ENST00000570904 CARMIL2Q6F5E8 1435 aa35.37■■■■□ 3.25
LITAF-205ENST00000570904 MAPKBP1O60336 1514 aa35.35■■■■□ 3.25
LITAF-205ENST00000570904 TNIKQ9UKE5 1360 aa35.33■■■■□ 3.25
LITAF-205ENST00000570904 ABCC10Q5T3U5 1492 aa35.3■■■■□ 3.24
LITAF-205ENST00000570904 FAM69CQ0P6D2 419 aa35.28■■■■□ 3.24
LITAF-205ENST00000570904 DISP1Q96F81 1524 aa35.27■■■■□ 3.24
LITAF-205ENST00000570904 DIP2BQ9P265 1576 aa35.23■■■■□ 3.23
LITAF-205ENST00000570904 UGGT2Q9NYU1 1516 aa35.22■■■■□ 3.23
LITAF-205ENST00000570904 ABCC2Q92887 1545 aa35.16■■■■□ 3.22
LITAF-205ENST00000570904 KIAA0556O60303 1618 aa35.13■■■■□ 3.21
LITAF-205ENST00000570904 PRXQ9BXM0 1461 aa35.12■■■■□ 3.21
LITAF-205ENST00000570904 UACAQ9BZF9 1416 aa35.11■■■■□ 3.21
LITAF-205ENST00000570904 CTTNBP2Q8WZ74 1663 aa35.1■■■■□ 3.21
LITAF-205ENST00000570904 UHRF1BP1LA0JNW5 1464 aa35.09■■■■□ 3.21
LITAF-205ENST00000570904 ASXL2Q76L83 1435 aa35.02■■■■□ 3.2
LITAF-205ENST00000570904 PLB1Q6P1J6 1458 aa34.97■■■■□ 3.19
LITAF-205ENST00000570904 TSPOAP1O95153 1857 aa34.96■■■■□ 3.19
LITAF-205ENST00000570904 KDM5BQ9UGL1 1544 aa34.95■■■■□ 3.19
LITAF-205ENST00000570904 GOLGA3Q08378 1498 aa34.94■■■■□ 3.18
LITAF-205ENST00000570904 CSRNP3Q8WYN3 585 aa34.9■■■■□ 3.18
LITAF-205ENST00000570904 AEBP2Q6ZN18 517 aaPredicted RBP34.89■■■■□ 3.18
LITAF-205ENST00000570904 ZCCHC11Q5TAX3 1644 aaKnown RBP34.88■■■■□ 3.17
LITAF-205ENST00000570904 GLI2P10070 1586 aa34.86■■■■□ 3.17
LITAF-205ENST00000570904 KDM6BO15054 1643 aa34.85■■■■□ 3.17
LITAF-205ENST00000570904 EPRSP07814 1512 aaKnown RBP34.81■■■■□ 3.16
LITAF-205ENST00000570904 ABCA8O94911 1581 aa34.79■■■■□ 3.16
LITAF-205ENST00000570904 EEA1Q15075 1411 aa34.78■■■■□ 3.16
LITAF-205ENST00000570904 PPRC1Q5VV67 1664 aaKnown RBP34.77■■■■□ 3.16
LITAF-205ENST00000570904 P3H3Q8IVL6 736 aa34.72■■■■□ 3.15
LITAF-205ENST00000570904 WDR7Q9Y4E6 1490 aa34.71■■■■□ 3.15
LITAF-205ENST00000570904 FAM9AQ8IZU1 332 aaPredicted RBP34.71■■■■□ 3.15
LITAF-205ENST00000570904 MAP3K4Q9Y6R4 1608 aa34.68■■■■□ 3.14
LITAF-205ENST00000570904 SAMD9Q5K651 1589 aa34.64■■■■□ 3.14
LITAF-205ENST00000570904 ARID3CA6NKF2 412 aa34.57■■■■□ 3.12
LITAF-205ENST00000570904 TEX14Q8IWB6 1497 aa34.57■■■■□ 3.12
LITAF-205ENST00000570904 RANGAP1P46060 587 aaPredicted RBP34.56■■■■□ 3.12
LITAF-205ENST00000570904 KCNH8Q96L42 1107 aa34.55■■■■□ 3.12
LITAF-205ENST00000570904 COL17A1Q9UMD9 1497 aaPredicted RBP34.53■■■■□ 3.12
LITAF-205ENST00000570904 KIF21BO75037 1637 aa34.51■■■■□ 3.11
LITAF-205ENST00000570904 CHIC1Q5VXU3 224 aa34.5■■■■□ 3.11
LITAF-205ENST00000570904 ATP10BO94823 1461 aa34.5■■■■□ 3.11
LITAF-205ENST00000570904 CD109Q6YHK3 1445 aa34.47■■■■□ 3.11
LITAF-205ENST00000570904 FHOD3Q2V2M9 1422 aa34.47■■■■□ 3.11
LITAF-205ENST00000570904 RAPGEF6Q8TEU7 1601 aa34.46■■■■□ 3.11
LITAF-205ENST00000570904 CFAP43Q8NDM7 1665 aa34.45■■■■□ 3.11
LITAF-205ENST00000570904 MAGI3Q5TCQ9 1506 aa34.42■■■■□ 3.1
LITAF-205ENST00000570904 KDM4FA0A1W2PPD8 638 aa34.41■■■■□ 3.1
LITAF-205ENST00000570904 EHMT2Q96KQ7 1210 aa34.37■■■■□ 3.09
LITAF-205ENST00000570904 NUP153P49790 1475 aaKnown RBP34.35■■■■□ 3.09
LITAF-205ENST00000570904 EFCAB5A4FU69 1503 aa34.33■■■■□ 3.09
LITAF-205ENST00000570904 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.32■■■■□ 3.08
LITAF-205ENST00000570904 HNRNPUL2Q1KMD3 747 aaKnown RBP34.32■■■■□ 3.08
LITAF-205ENST00000570904 UBTFP17480 764 aaKnown RBP34.26■■■■□ 3.08
LITAF-205ENST00000570904 ABCA9Q8IUA7 1624 aa34.26■■■■□ 3.07
LITAF-205ENST00000570904 ADGRL1O94910 1474 aa34.21■■■■□ 3.07
LITAF-205ENST00000570904 ARAP3Q8WWN8 1544 aa34.14■■■■□ 3.06
LITAF-205ENST00000570904 PLEKHD1A6NEE1 506 aa34.1■■■■□ 3.05
LITAF-205ENST00000570904 ARHGAP35Q9NRY4 1499 aa34.09■■■■□ 3.05
LITAF-205ENST00000570904 CDK13Q14004 1512 aaKnown RBP34.06■■■■□ 3.04
LITAF-205ENST00000570904 PHLDB1Q86UU1 1377 aa34.06■■■■□ 3.04
LITAF-205ENST00000570904 NEO1Q92859 1461 aa34.05■■■■□ 3.04
LITAF-205ENST00000570904 FMN1Q68DA7 1419 aa34.02■■■■□ 3.04
LITAF-205ENST00000570904 RAPGEF3O95398 923 aa33.99■■■■□ 3.03
LITAF-205ENST00000570904 ATP1B4Q9UN42 357 aaPredicted RBP33.98■■■■□ 3.03
LITAF-205ENST00000570904 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.98■■■■□ 3.03
LITAF-205ENST00000570904 HECW1Q76N89 1606 aa33.96■■■■□ 3.03
LITAF-205ENST00000570904 TTC37Q6PGP7 1564 aa33.95■■■■□ 3.03
LITAF-205ENST00000570904 FRMPD1Q5SYB0 1578 aa33.92■■■■□ 3.02
LITAF-205ENST00000570904 FANCAO15360 1455 aa33.88■■■■□ 3.01
LITAF-205ENST00000570904 AKNAQ7Z591 1439 aa33.87■■■■□ 3.01
LITAF-205ENST00000570904 CFAP74Q9C0B2 1584 aa33.84■■■■□ 3.01
LITAF-205ENST00000570904 DENND4BO75064 1496 aaPredicted RBP33.83■■■■□ 3.01
LITAF-205ENST00000570904 RICTORQ6R327 1708 aa33.77■■■■□ 3
LITAF-205ENST00000570904 CDK11AQ9UQ88 783 aaPredicted RBP33.77■■■■□ 3
LITAF-205ENST00000570904 LRRIQ1Q96JM4 1722 aa33.76■■■□□ 2.99
LITAF-205ENST00000570904 PLCH2O75038 1416 aa33.75■■■□□ 2.99
LITAF-205ENST00000570904 KIF14Q15058 1648 aa33.74■■■□□ 2.99
LITAF-205ENST00000570904 PCF11O94913 1555 aaKnown RBP33.73■■■□□ 2.99
LITAF-205ENST00000570904 TROQ12816 1431 aaPredicted RBP33.73■■■□□ 2.99
LITAF-205ENST00000570904 ARHGEF40Q8TER5 1519 aa33.73■■■□□ 2.99
LITAF-205ENST00000570904 CASKIN1Q8WXD9 1431 aa33.7■■■□□ 2.98
LITAF-205ENST00000570904 ARID4BQ4LE39 1312 aaPredicted RBP33.67■■■□□ 2.98
LITAF-205ENST00000570904 MYO5CQ9NQX4 1742 aa33.67■■■□□ 2.98
LITAF-205ENST00000570904 CLIP1P30622 1438 aa33.66■■■□□ 2.98
LITAF-205ENST00000570904 ZMYM4Q5VZL5 1548 aa33.66■■■□□ 2.98
LITAF-205ENST00000570904 ADAMTSL3P82987 1691 aa33.65■■■□□ 2.98
LITAF-205ENST00000570904 HECW2Q9P2P5 1572 aa33.65■■■□□ 2.98
LITAF-205ENST00000570904 SCAPERQ9BY12 1400 aa33.65■■■□□ 2.98
LITAF-205ENST00000570904 CCDC18Q5T9S5 1454 aa33.63■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms