RNA–Protein interactions for RNA: ENST00000570883.5

RPAIN-207, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 953 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-207ENST00000570883 KIAA0586Q9BVV6 1533 aa22.8■■□□□ 1.24
RPAIN-207ENST00000570883 PRG4Q92954 1404 aaPredicted RBP22.76■■□□□ 1.23
RPAIN-207ENST00000570883 RAPGEF2Q9Y4G8 1499 aa22.76■■□□□ 1.23
RPAIN-207ENST00000570883 JPH4Q96JJ6 628 aa22.74■■□□□ 1.23
RPAIN-207ENST00000570883 IQGAP2Q13576 1575 aa22.72■■□□□ 1.23
RPAIN-207ENST00000570883 PRXQ9BXM0 1461 aa22.69■■□□□ 1.22
RPAIN-207ENST00000570883 CTTNBP2Q8WZ74 1663 aa22.68■■□□□ 1.22
RPAIN-207ENST00000570883 CHIC1Q5VXU3 224 aa22.64■■□□□ 1.21
RPAIN-207ENST00000570883 EEA1Q15075 1411 aa22.6■■□□□ 1.21
RPAIN-207ENST00000570883 UGGT2Q9NYU1 1516 aa22.57■■□□□ 1.2
RPAIN-207ENST00000570883 DISP1Q96F81 1524 aa22.56■■□□□ 1.2
RPAIN-207ENST00000570883 CSRNP3Q8WYN3 585 aa22.55■■□□□ 1.2
RPAIN-207ENST00000570883 ADCY10Q96PN6 1610 aa22.53■■□□□ 1.2
RPAIN-207ENST00000570883 KIAA0556O60303 1618 aa22.51■■□□□ 1.19
RPAIN-207ENST00000570883 CARMIL2Q6F5E8 1435 aa22.5■■□□□ 1.19
RPAIN-207ENST00000570883 KIF21BO75037 1637 aa22.48■■□□□ 1.19
RPAIN-207ENST00000570883 FAM9AQ8IZU1 332 aaPredicted RBP22.47■■□□□ 1.19
RPAIN-207ENST00000570883 TNIKQ9UKE5 1360 aa22.46■■□□□ 1.19
RPAIN-207ENST00000570883 PTPRGP23470 1445 aa22.45■■□□□ 1.18
RPAIN-207ENST00000570883 TRHP20396 242 aaPredicted RBP22.41■■□□□ 1.18
RPAIN-207ENST00000570883 KIF13AQ9H1H9 1805 aa22.38■■□□□ 1.17
RPAIN-207ENST00000570883 TTBK1Q5TCY1 1321 aaPredicted RBP22.37■■□□□ 1.17
RPAIN-207ENST00000570883 GOLGA3Q08378 1498 aa22.37■■□□□ 1.17
RPAIN-207ENST00000570883 MAPKBP1O60336 1514 aa22.36■■□□□ 1.17
RPAIN-207ENST00000570883 SAMD9Q5K651 1589 aa22.35■■□□□ 1.17
RPAIN-207ENST00000570883 UHRF1BP1LA0JNW5 1464 aa22.34■■□□□ 1.17
RPAIN-207ENST00000570883 ABCC2Q92887 1545 aa22.33■■□□□ 1.17
RPAIN-207ENST00000570883 UACAQ9BZF9 1416 aa22.31■■□□□ 1.16
RPAIN-207ENST00000570883 ABCA8O94911 1581 aa22.26■■□□□ 1.15
RPAIN-207ENST00000570883 DIP2BQ9P265 1576 aa22.26■■□□□ 1.15
RPAIN-207ENST00000570883 PLB1Q6P1J6 1458 aa22.26■■□□□ 1.15
RPAIN-207ENST00000570883 ZCCHC11Q5TAX3 1644 aaKnown RBP22.25■■□□□ 1.15
RPAIN-207ENST00000570883 NPM1P06748 294 aaKnown RBP eCLIP22.25■■□□□ 1.15
RPAIN-207ENST00000570883 KDM5BQ9UGL1 1544 aa22.24■■□□□ 1.15
RPAIN-207ENST00000570883 ABCC10Q5T3U5 1492 aa22.23■■□□□ 1.15
RPAIN-207ENST00000570883 P3H3Q8IVL6 736 aa22.19■■□□□ 1.14
RPAIN-207ENST00000570883 EHMT2Q96KQ7 1210 aa22.19■■□□□ 1.14
RPAIN-207ENST00000570883 EFCAB5A4FU69 1503 aa22.18■■□□□ 1.14
RPAIN-207ENST00000570883 ASXL2Q76L83 1435 aa22.17■■□□□ 1.14
RPAIN-207ENST00000570883 FHOD3Q2V2M9 1422 aa22.15■■□□□ 1.14
RPAIN-207ENST00000570883 RANGAP1P46060 587 aaPredicted RBP22.15■■□□□ 1.14
RPAIN-207ENST00000570883 RAPGEF6Q8TEU7 1601 aa22.13■■□□□ 1.13
RPAIN-207ENST00000570883 TSPOAP1O95153 1857 aa22.13■■□□□ 1.13
RPAIN-207ENST00000570883 UBTFP17480 764 aaKnown RBP22.12■■□□□ 1.13
RPAIN-207ENST00000570883 FAM69CQ0P6D2 419 aa22.11■■□□□ 1.13
RPAIN-207ENST00000570883 GLI2P10070 1586 aa22.08■■□□□ 1.13
RPAIN-207ENST00000570883 ARHGAP35Q9NRY4 1499 aa22.06■■□□□ 1.12
RPAIN-207ENST00000570883 PPRC1Q5VV67 1664 aaKnown RBP22.06■■□□□ 1.12
RPAIN-207ENST00000570883 EPRSP07814 1512 aaKnown RBP22.06■■□□□ 1.12
RPAIN-207ENST00000570883 WDR7Q9Y4E6 1490 aa22.05■■□□□ 1.12
RPAIN-207ENST00000570883 NUP153P49790 1475 aaKnown RBP22.03■■□□□ 1.12
RPAIN-207ENST00000570883 MAP3K4Q9Y6R4 1608 aa22.03■■□□□ 1.12
RPAIN-207ENST00000570883 ATP10BO94823 1461 aa22.03■■□□□ 1.12
RPAIN-207ENST00000570883 ARID3CA6NKF2 412 aa21.99■■□□□ 1.11
RPAIN-207ENST00000570883 CFAP43Q8NDM7 1665 aa21.95■■□□□ 1.1
RPAIN-207ENST00000570883 FMN1Q68DA7 1419 aa21.91■■□□□ 1.1
RPAIN-207ENST00000570883 LRRIQ1Q96JM4 1722 aa21.91■■□□□ 1.1
RPAIN-207ENST00000570883 HECW1Q76N89 1606 aa21.91■■□□□ 1.1
RPAIN-207ENST00000570883 KDM6BO15054 1643 aa21.9■■□□□ 1.1
RPAIN-207ENST00000570883 CDK13Q14004 1512 aaKnown RBP21.89■■□□□ 1.09
RPAIN-207ENST00000570883 ABCA9Q8IUA7 1624 aa21.87■■□□□ 1.09
RPAIN-207ENST00000570883 KCNH8Q96L42 1107 aa21.86■■□□□ 1.09
RPAIN-207ENST00000570883 CLIP1P30622 1438 aa21.86■■□□□ 1.09
RPAIN-207ENST00000570883 PCF11O94913 1555 aaKnown RBP21.85■■□□□ 1.09
RPAIN-207ENST00000570883 TEX14Q8IWB6 1497 aa21.83■■□□□ 1.08
RPAIN-207ENST00000570883 MAGI3Q5TCQ9 1506 aa21.82■■□□□ 1.08
RPAIN-207ENST00000570883 CD109Q6YHK3 1445 aa21.81■■□□□ 1.08
RPAIN-207ENST00000570883 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.81■■□□□ 1.08
RPAIN-207ENST00000570883 HNRNPUL2Q1KMD3 747 aaKnown RBP21.81■■□□□ 1.08
RPAIN-207ENST00000570883 COL17A1Q9UMD9 1497 aaPredicted RBP21.77■■□□□ 1.07
RPAIN-207ENST00000570883 CASKIN1Q8WXD9 1431 aa21.76■■□□□ 1.07
RPAIN-207ENST00000570883 TTC37Q6PGP7 1564 aa21.75■■□□□ 1.07
RPAIN-207ENST00000570883 CEP162Q5TB80 1403 aa21.75■■□□□ 1.07
RPAIN-207ENST00000570883 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.74■■□□□ 1.07
RPAIN-207ENST00000570883 FYCO1Q9BQS8 1478 aa21.73■■□□□ 1.07
RPAIN-207ENST00000570883 PLEKHD1A6NEE1 506 aa21.73■■□□□ 1.07
RPAIN-207ENST00000570883 ATP1B4Q9UN42 357 aaPredicted RBP21.73■■□□□ 1.07
RPAIN-207ENST00000570883 KIF14Q15058 1648 aa21.7■■□□□ 1.06
RPAIN-207ENST00000570883 LOC105371045A0A1W2PR82 267 aa21.7■■□□□ 1.06
RPAIN-207ENST00000570883 CCDC18Q5T9S5 1454 aa21.69■■□□□ 1.06
RPAIN-207ENST00000570883 TROQ12816 1431 aaPredicted RBP21.64■■□□□ 1.06
RPAIN-207ENST00000570883 MYO5CQ9NQX4 1742 aa21.64■■□□□ 1.06
RPAIN-207ENST00000570883 ARAP3Q8WWN8 1544 aa21.64■■□□□ 1.05
RPAIN-207ENST00000570883 NEO1Q92859 1461 aa21.64■■□□□ 1.05
RPAIN-207ENST00000570883 CFAP74Q9C0B2 1584 aa21.61■■□□□ 1.05
RPAIN-207ENST00000570883 FRMPD1Q5SYB0 1578 aa21.59■■□□□ 1.05
RPAIN-207ENST00000570883 CDK11AQ9UQ88 783 aaPredicted RBP21.59■■□□□ 1.05
RPAIN-207ENST00000570883 FANCAO15360 1455 aa21.58■■□□□ 1.04
RPAIN-207ENST00000570883 PHLDB1Q86UU1 1377 aa21.57■■□□□ 1.04
RPAIN-207ENST00000570883 RICTORQ6R327 1708 aa21.56■■□□□ 1.04
RPAIN-207ENST00000570883 CDC42BPBQ9Y5S2 1711 aa21.55■■□□□ 1.04
RPAIN-207ENST00000570883 PLCH2O75038 1416 aa21.54■■□□□ 1.04
RPAIN-207ENST00000570883 CDC42BPAQ5VT25 1732 aa21.53■■□□□ 1.04
RPAIN-207ENST00000570883 PREX2Q70Z35 1606 aa21.52■■□□□ 1.04
RPAIN-207ENST00000570883 AKNAQ7Z591 1439 aa21.52■■□□□ 1.04
RPAIN-207ENST00000570883 VPS8Q8N3P4 1428 aa21.49■■□□□ 1.03
RPAIN-207ENST00000570883 ARHGAP5Q13017 1502 aa21.47■■□□□ 1.03
RPAIN-207ENST00000570883 RAPGEF3O95398 923 aa21.47■■□□□ 1.03
RPAIN-207ENST00000570883 DENND4BO75064 1496 aaPredicted RBP21.46■■□□□ 1.03
RPAIN-207ENST00000570883 ADGRL1O94910 1474 aa21.45■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms