RNA–Protein interactions for RNA: ENST00000569891.5

CYLD-216, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 1 (best)

Gene CYLD, Length 4,665 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-216ENST00000569891 SAMD9Q5K651 1589 aa9.26□□□□□ -0.93
CYLD-216ENST00000569891 PCGF6Q9BYE7 350 aa9.25□□□□□ -0.93
CYLD-216ENST00000569891 ADAMTS12P58397 1594 aa9.25□□□□□ -0.93
CYLD-216ENST00000569891 IGF1RP08069 1367 aa9.25□□□□□ -0.93
CYLD-216ENST00000569891 KIF13AQ9H1H9 1805 aa9.24□□□□□ -0.93
CYLD-216ENST00000569891 IFT140Q96RY7 1462 aa9.24□□□□□ -0.93
CYLD-216ENST00000569891 VPS8Q8N3P4 1428 aa9.23□□□□□ -0.93
CYLD-216ENST00000569891 ZEB1P37275 1124 aaPredicted RBP9.22□□□□□ -0.93
CYLD-216ENST00000569891 GAPVD1Q14C86 1478 aa9.22□□□□□ -0.93
CYLD-216ENST00000569891 FHAD1B1AJZ9 1412 aa9.2□□□□□ -0.94
CYLD-216ENST00000569891 RAD54L2Q9Y4B4 1467 aa9.19□□□□□ -0.94
CYLD-216ENST00000569891 GRIN2BQ13224 1484 aa9.18□□□□□ -0.94
CYLD-216ENST00000569891 EFCAB5A4FU69 1503 aa9.17□□□□□ -0.94
CYLD-216ENST00000569891 EP400Q96L91 3159 aa9.17□□□□□ -0.94
CYLD-216ENST00000569891 MAGI3Q5TCQ9 1506 aa9.16□□□□□ -0.94
CYLD-216ENST00000569891 TDRD9Q8NDG6 1382 aaKnown RBP9.15□□□□□ -0.94
CYLD-216ENST00000569891 RANGAP1P46060 587 aaPredicted RBP9.15□□□□□ -0.95
CYLD-216ENST00000569891 FMN1Q68DA7 1419 aa9.13□□□□□ -0.95
CYLD-216ENST00000569891 MAGI1Q96QZ7 1491 aaPredicted RBP9.1□□□□□ -0.95
CYLD-216ENST00000569891 MAP3K1Q13233 1512 aa9.09□□□□□ -0.95
CYLD-216ENST00000569891 HRCP23327 699 aa9.08□□□□□ -0.96
CYLD-216ENST00000569891 CHMP7Q8WUX9 453 aaPredicted RBP9.08□□□□□ -0.96
CYLD-216ENST00000569891 ARHGAP35Q9NRY4 1499 aa9.08□□□□□ -0.96
CYLD-216ENST00000569891 AQRO60306 1485 aaKnown RBP eCLIP9.07□□□□□ -0.96
CYLD-216ENST00000569891 ARAP1Q96P48 1450 aa9.07□□□□□ -0.96
CYLD-216ENST00000569891 ADCY10Q96PN6 1610 aa9.06□□□□□ -0.96
CYLD-216ENST00000569891 DISP1Q96F81 1524 aa9.06□□□□□ -0.96
CYLD-216ENST00000569891 FYCO1Q9BQS8 1478 aa9.05□□□□□ -0.96
CYLD-216ENST00000569891 ATP1B4Q9UN42 357 aaPredicted RBP9.05□□□□□ -0.96
CYLD-216ENST00000569891 CARMIL2Q6F5E8 1435 aa9.04□□□□□ -0.96
CYLD-216ENST00000569891 IQGAP2Q13576 1575 aa9.03□□□□□ -0.96
CYLD-216ENST00000569891 SYNJ2O15056 1496 aa9.03□□□□□ -0.96
CYLD-216ENST00000569891 CDK11AQ9UQ88 783 aaPredicted RBP9.03□□□□□ -0.96
CYLD-216ENST00000569891 KIAA0586Q9BVV6 1533 aa9.03□□□□□ -0.96
CYLD-216ENST00000569891 CASKIN1Q8WXD9 1431 aa9.03□□□□□ -0.96
CYLD-216ENST00000569891 SNAPC4Q5SXM2 1469 aa9.02□□□□□ -0.97
CYLD-216ENST00000569891 PPARGC1BQ86YN6 1023 aaKnown RBP9.02□□□□□ -0.97
CYLD-216ENST00000569891 PCNTO95613 3336 aa9.02□□□□□ -0.97
CYLD-216ENST00000569891 CCDC18Q5T9S5 1454 aa9.01□□□□□ -0.97
CYLD-216ENST00000569891 GRIN2AQ12879 1464 aa9.01□□□□□ -0.97
CYLD-216ENST00000569891 TTBK1Q5TCY1 1321 aaPredicted RBP9□□□□□ -0.97
CYLD-216ENST00000569891 ACIN1Q9UKV3 1341 aaKnown RBP9□□□□□ -0.97
CYLD-216ENST00000569891 CCER1Q8TC90 406 aaPredicted RBP9□□□□□ -0.97
CYLD-216ENST00000569891 ARHGEF11O15085 1522 aa9□□□□□ -0.97
CYLD-216ENST00000569891 FBLN2P98095 1184 aa9□□□□□ -0.97
CYLD-216ENST00000569891 CDC42BPBQ9Y5S2 1711 aa9□□□□□ -0.97
CYLD-216ENST00000569891 CFAP43Q8NDM7 1665 aa8.99□□□□□ -0.97
CYLD-216ENST00000569891 MTUS2Q5JR59 1369 aa8.99□□□□□ -0.97
CYLD-216ENST00000569891 FHOD3Q2V2M9 1422 aa8.98□□□□□ -0.97
CYLD-216ENST00000569891 P3H3Q8IVL6 736 aa8.98□□□□□ -0.97
CYLD-216ENST00000569891 TIAM1Q13009 1591 aa8.98□□□□□ -0.97
CYLD-216ENST00000569891 UGGT2Q9NYU1 1516 aa8.98□□□□□ -0.97
CYLD-216ENST00000569891 RIMBP3CA6NJZ7 1639 aa8.97□□□□□ -0.97
CYLD-216ENST00000569891 RIMBP3BA6NNM3 1639 aa8.97□□□□□ -0.97
CYLD-216ENST00000569891 HECW1Q76N89 1606 aa8.97□□□□□ -0.97
CYLD-216ENST00000569891 RIMBP3Q9UFD9 1639 aa8.97□□□□□ -0.97
CYLD-216ENST00000569891 ABCC2Q92887 1545 aa8.96□□□□□ -0.97
CYLD-216ENST00000569891 FRMPD1Q5SYB0 1578 aa8.96□□□□□ -0.98
CYLD-216ENST00000569891 LRRC9Q6ZRR7 1453 aa8.95□□□□□ -0.98
CYLD-216ENST00000569891 CDC42BPAQ5VT25 1732 aa8.95□□□□□ -0.98
CYLD-216ENST00000569891 CCNB3Q8WWL7 1395 aa8.95□□□□□ -0.98
CYLD-216ENST00000569891 NUP160Q12769 1436 aa8.94□□□□□ -0.98
CYLD-216ENST00000569891 ABCA8O94911 1581 aa8.94□□□□□ -0.98
CYLD-216ENST00000569891 PCF11O94913 1555 aaKnown RBP8.94□□□□□ -0.98
CYLD-216ENST00000569891 RRBP1Q9P2E9 1410 aaKnown RBP8.93□□□□□ -0.98
CYLD-216ENST00000569891 DENND4BO75064 1496 aaPredicted RBP8.93□□□□□ -0.98
CYLD-216ENST00000569891 EHBP1L1Q8N3D4 1523 aa8.93□□□□□ -0.98
CYLD-216ENST00000569891 CLSPNQ9HAW4 1339 aa8.93□□□□□ -0.98
CYLD-216ENST00000569891 KDM5BQ9UGL1 1544 aa8.92□□□□□ -0.98
CYLD-216ENST00000569891 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.92□□□□□ -0.98
CYLD-216ENST00000569891 HNRNPUL2Q1KMD3 747 aaKnown RBP8.92□□□□□ -0.98
CYLD-216ENST00000569891 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.91□□□□□ -0.98
CYLD-216ENST00000569891 JPH4Q96JJ6 628 aa8.91□□□□□ -0.98
CYLD-216ENST00000569891 KIAA0556O60303 1618 aa8.9□□□□□ -0.98
CYLD-216ENST00000569891 FAM50AQ14320 339 aaKnown RBP8.89□□□□□ -0.99
CYLD-216ENST00000569891 KANK4Q5T7N3 995 aaPredicted RBP8.89□□□□□ -0.99
CYLD-216ENST00000569891 CROCC2H7BZ55 1655 aa8.89□□□□□ -0.99
CYLD-216ENST00000569891 SUPT6HQ7KZ85 1726 aaKnown RBP8.88□□□□□ -0.99
CYLD-216ENST00000569891 KDM6BO15054 1643 aa8.88□□□□□ -0.99
CYLD-216ENST00000569891 MAP3K4Q9Y6R4 1608 aa8.88□□□□□ -0.99
CYLD-216ENST00000569891 BRCA2P51587 3418 aa8.86□□□□□ -0.99
CYLD-216ENST00000569891 EPRSP07814 1512 aaKnown RBP8.85□□□□□ -0.99
CYLD-216ENST00000569891 PLEKHD1A6NEE1 506 aa8.85□□□□□ -0.99
CYLD-216ENST00000569891 KIF14Q15058 1648 aa8.85□□□□□ -0.99
CYLD-216ENST00000569891 RAPGEF6Q8TEU7 1601 aa8.85□□□□□ -0.99
CYLD-216ENST00000569891 MYOM3Q5VTT5 1437 aa8.85□□□□□ -0.99
CYLD-216ENST00000569891 MIA2Q96PC5 1412 aa8.84□□□□□ -0.99
CYLD-216ENST00000569891 PTPRGP23470 1445 aa8.84□□□□□ -0.99
CYLD-216ENST00000569891 USP34Q70CQ2 3546 aa8.84□□□□□ -0.99
CYLD-216ENST00000569891 FGD6Q6ZV73 1430 aa8.83□□□□□ -1
CYLD-216ENST00000569891 ZCCHC11Q5TAX3 1644 aaKnown RBP8.83□□□□□ -1
CYLD-216ENST00000569891 NCOA2Q15596 1464 aa8.83□□□□□ -1
CYLD-216ENST00000569891 RICTORQ6R327 1708 aa8.82□□□□□ -1
CYLD-216ENST00000569891 PRG4Q92954 1404 aaPredicted RBP8.82□□□□□ -1
CYLD-216ENST00000569891 ITGAEP38570 1179 aa8.81□□□□□ -1
CYLD-216ENST00000569891 SETD5Q9C0A6 1442 aa8.81□□□□□ -1
CYLD-216ENST00000569891 TROQ12816 1431 aaPredicted RBP8.8□□□□□ -1
CYLD-216ENST00000569891 ADGBQ8N7X0 1667 aa8.8□□□□□ -1
CYLD-216ENST00000569891 PHLDB1Q86UU1 1377 aa8.8□□□□□ -1
CYLD-216ENST00000569891 MROH1Q8NDA8 1641 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms