RNA–Protein interactions for RNA: ENST00000569820.5

SPG7-222, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 5

Gene SPG7, Length 2,305 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-222ENST00000569820 ARHGAP35Q9NRY4 1499 aa18.14■□□□□ 0.49
SPG7-222ENST00000569820 THOC2Q8NI27 1593 aaKnown RBP18.13■□□□□ 0.49
SPG7-222ENST00000569820 PBRM1Q86U86 1689 aa18.13■□□□□ 0.49
SPG7-222ENST00000569820 CTTNBP2Q8WZ74 1663 aa18.12■□□□□ 0.49
SPG7-222ENST00000569820 ERCC6Q03468 1493 aa18.09■□□□□ 0.49
SPG7-222ENST00000569820 IFT140Q96RY7 1462 aa18.06■□□□□ 0.48
SPG7-222ENST00000569820 DIEXFQ68CQ4 756 aaKnown RBP18.04■□□□□ 0.48
SPG7-222ENST00000569820 AQRO60306 1485 aaKnown RBP eCLIP18.02■□□□□ 0.476e-9■■■□□ 17.8
SPG7-222ENST00000569820 ADAMTS12P58397 1594 aa18.01■□□□□ 0.47
SPG7-222ENST00000569820 CCER1Q8TC90 406 aaPredicted RBP18■□□□□ 0.47
SPG7-222ENST00000569820 ZNF608Q9ULD9 1512 aaPredicted RBP18■□□□□ 0.47
SPG7-222ENST00000569820 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.99■□□□□ 0.47
SPG7-222ENST00000569820 EFCAB5A4FU69 1503 aa17.99■□□□□ 0.47
SPG7-222ENST00000569820 GRIN2BQ13224 1484 aa17.98■□□□□ 0.47
SPG7-222ENST00000569820 EIF4G3O43432 1585 aaKnown RBP17.98■□□□□ 0.47
SPG7-222ENST00000569820 BCL11AQ9H165 835 aa17.97■□□□□ 0.47
SPG7-222ENST00000569820 FHAD1B1AJZ9 1412 aa17.95■□□□□ 0.46
SPG7-222ENST00000569820 APLP2Q06481 763 aa17.95■□□□□ 0.46
SPG7-222ENST00000569820 SAMD9Q5K651 1589 aa17.92■□□□□ 0.46
SPG7-222ENST00000569820 PCF11O94913 1555 aaKnown RBP17.91■□□□□ 0.46
SPG7-222ENST00000569820 FHOD3Q2V2M9 1422 aa17.88■□□□□ 0.45
SPG7-222ENST00000569820 TIAM1Q13009 1591 aa17.87■□□□□ 0.45
SPG7-222ENST00000569820 PRKCSHP14314 528 aaPredicted RBP17.87■□□□□ 0.45
SPG7-222ENST00000569820 MAP3K1Q13233 1512 aa17.87■□□□□ 0.45
SPG7-222ENST00000569820 SNAPC4Q5SXM2 1469 aa17.87■□□□□ 0.45
SPG7-222ENST00000569820 CFAP43Q8NDM7 1665 aa17.87■□□□□ 0.45
SPG7-222ENST00000569820 IQGAP2Q13576 1575 aa17.85■□□□□ 0.45
SPG7-222ENST00000569820 KANK4Q5T7N3 995 aaPredicted RBP17.84■□□□□ 0.45
SPG7-222ENST00000569820 P3H3Q8IVL6 736 aa17.83■□□□□ 0.44
SPG7-222ENST00000569820 FYCO1Q9BQS8 1478 aa17.82■□□□□ 0.44
SPG7-222ENST00000569820 MAGI1Q96QZ7 1491 aaPredicted RBP17.81■□□□□ 0.44
SPG7-222ENST00000569820 GRIN2AQ12879 1464 aa17.8■□□□□ 0.44
SPG7-222ENST00000569820 CASKIN1Q8WXD9 1431 aa17.79■□□□□ 0.44
SPG7-222ENST00000569820 FMN1Q68DA7 1419 aa17.78■□□□□ 0.44
SPG7-222ENST00000569820 LRRC9Q6ZRR7 1453 aa17.76■□□□□ 0.43
SPG7-222ENST00000569820 LRRIQ1Q96JM4 1722 aa17.75■□□□□ 0.43
SPG7-222ENST00000569820 UGGT2Q9NYU1 1516 aa17.75■□□□□ 0.43
SPG7-222ENST00000569820 SYNJ2O15056 1496 aa17.74■□□□□ 0.43
SPG7-222ENST00000569820 RRBP1Q9P2E9 1410 aaKnown RBP17.73■□□□□ 0.43
SPG7-222ENST00000569820 KIAA0586Q9BVV6 1533 aa17.73■□□□□ 0.43
SPG7-222ENST00000569820 CEP170Q5SW79 1584 aa17.71■□□□□ 0.43
SPG7-222ENST00000569820 ZNF316A6NFI3 1004 aaPredicted RBP17.7■□□□□ 0.42
SPG7-222ENST00000569820 YTHDC1Q96MU7 727 aaKnown RBP17.7■□□□□ 0.42
SPG7-222ENST00000569820 KIAA0556O60303 1618 aa17.68■□□□□ 0.42
SPG7-222ENST00000569820 ERICH6Q7L0X2 663 aa17.67■□□□□ 0.42
SPG7-222ENST00000569820 HNRNPUL2Q1KMD3 747 aaKnown RBP17.65■□□□□ 0.42
SPG7-222ENST00000569820 DISP1Q96F81 1524 aa17.65■□□□□ 0.42
SPG7-222ENST00000569820 NUP160Q12769 1436 aa17.64■□□□□ 0.42
SPG7-222ENST00000569820 ATP1B4Q9UN42 357 aaPredicted RBP17.64■□□□□ 0.41
SPG7-222ENST00000569820 HECW1Q76N89 1606 aa17.63■□□□□ 0.41
SPG7-222ENST00000569820 CCNB3Q8WWL7 1395 aa17.63■□□□□ 0.41
SPG7-222ENST00000569820 CHMP7Q8WUX9 453 aaPredicted RBP17.63■□□□□ 0.41
SPG7-222ENST00000569820 PHLDB1Q86UU1 1377 aa17.61■□□□□ 0.41
SPG7-222ENST00000569820 CCDC18Q5T9S5 1454 aa17.58■□□□□ 0.41
SPG7-222ENST00000569820 CHD1O14646 1710 aa17.57■□□□□ 0.4
SPG7-222ENST00000569820 EHBP1L1Q8N3D4 1523 aa17.56■□□□□ 0.4
SPG7-222ENST00000569820 FBLN2P98095 1184 aa17.56■□□□□ 0.4
SPG7-222ENST00000569820 MAGI3Q5TCQ9 1506 aa17.55■□□□□ 0.4
SPG7-222ENST00000569820 MIER1Q8N108 512 aa17.54■□□□□ 0.4
SPG7-222ENST00000569820 EPRSP07814 1512 aaKnown RBP17.54■□□□□ 0.4
SPG7-222ENST00000569820 SUPT6HQ7KZ85 1726 aaKnown RBP17.53■□□□□ 0.4
SPG7-222ENST00000569820 MTUS2Q5JR59 1369 aa17.53■□□□□ 0.4
SPG7-222ENST00000569820 RAPGEF6Q8TEU7 1601 aa17.52■□□□□ 0.4
SPG7-222ENST00000569820 ANP32EQ9BTT0 268 aa17.52■□□□□ 0.39
SPG7-222ENST00000569820 CDK13Q14004 1512 aaKnown RBP17.51■□□□□ 0.39
SPG7-222ENST00000569820 NCOA2Q15596 1464 aa17.49■□□□□ 0.39
SPG7-222ENST00000569820 ARHGEF11O15085 1522 aa17.49■□□□□ 0.39
SPG7-222ENST00000569820 NUP153P49790 1475 aaKnown RBP17.48■□□□□ 0.39
SPG7-222ENST00000569820 FGD6Q6ZV73 1430 aa17.47■□□□□ 0.39
SPG7-222ENST00000569820 CARMIL2Q6F5E8 1435 aa17.46■□□□□ 0.39
SPG7-222ENST00000569820 JPH4Q96JJ6 628 aa17.46■□□□□ 0.38
SPG7-222ENST00000569820 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.45■□□□□ 0.38
SPG7-222ENST00000569820 MYOM3Q5VTT5 1437 aa17.43■□□□□ 0.38
SPG7-222ENST00000569820 SHROOM2Q13796 1616 aa17.42■□□□□ 0.38
SPG7-222ENST00000569820 PLB1Q6P1J6 1458 aa17.42■□□□□ 0.38
SPG7-222ENST00000569820 CLSPNQ9HAW4 1339 aa17.41■□□□□ 0.38
SPG7-222ENST00000569820 ITGAEP38570 1179 aa17.41■□□□□ 0.38
SPG7-222ENST00000569820 FAM50AQ14320 339 aaKnown RBP17.4■□□□□ 0.38
SPG7-222ENST00000569820 ABCA8O94911 1581 aa17.39■□□□□ 0.37
SPG7-222ENST00000569820 PTPN23Q9H3S7 1636 aa17.38■□□□□ 0.37
SPG7-222ENST00000569820 DHX57Q6P158 1386 aaKnown RBP17.38■□□□□ 0.37
SPG7-222ENST00000569820 ARID3CA6NKF2 412 aa17.36■□□□□ 0.37
SPG7-222ENST00000569820 PRG4Q92954 1404 aaPredicted RBP17.36■□□□□ 0.37
SPG7-222ENST00000569820 RAB3GAP2Q9H2M9 1393 aa17.35■□□□□ 0.37
SPG7-222ENST00000569820 TCOF1Q13428 1488 aaKnown RBP17.34■□□□□ 0.37
SPG7-222ENST00000569820 SETD5Q9C0A6 1442 aa17.33■□□□□ 0.36
SPG7-222ENST00000569820 CLASP1Q7Z460 1538 aa17.33■□□□□ 0.36
SPG7-222ENST00000569820 SUPT16HQ9Y5B9 1047 aaKnown RBP17.32■□□□□ 0.36
SPG7-222ENST00000569820 ADCY10Q96PN6 1610 aa17.32■□□□□ 0.36
SPG7-222ENST00000569820 PTPRKQ15262 1439 aa17.3■□□□□ 0.36
SPG7-222ENST00000569820 TROQ12816 1431 aaPredicted RBP17.29■□□□□ 0.36
SPG7-222ENST00000569820 MIA2Q96PC5 1412 aa17.29■□□□□ 0.36
SPG7-222ENST00000569820 ERCC6L2Q5T890 1561 aa17.28■□□□□ 0.36
SPG7-222ENST00000569820 KIF14Q15058 1648 aa17.28■□□□□ 0.36
SPG7-222ENST00000569820 CDK11AQ9UQ88 783 aaPredicted RBP17.26■□□□□ 0.35
SPG7-222ENST00000569820 PTPRGP23470 1445 aa17.26■□□□□ 0.35
SPG7-222ENST00000569820 ITSN2Q9NZM3 1697 aa17.25■□□□□ 0.35
SPG7-222ENST00000569820 ATP10BO94823 1461 aa17.25■□□□□ 0.35
SPG7-222ENST00000569820 TSHZ2Q9NRE2 1034 aa17.25■□□□□ 0.35
SPG7-222ENST00000569820 MAPKBP1O60336 1514 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms