RNA–Protein interactions for RNA: ENST00000569784.1

SCAPER-223, Transcript of S-phase cyclin A associated protein in the ER, human

TSL 4

Gene SCAPER, Length 580 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAPER-223	ENST00000569784	GAPVD1	Q14C86	1478 aa		15.07	■□□□□ 0
SCAPER-223	ENST00000569784	SYNJ2	O15056	1496 aa		15.04	■□□□□ -0
SCAPER-223	ENST00000569784	WRN	Q14191	1432 aa	Predicted RBP eCLIP	15.02	■□□□□ -0
SCAPER-223	ENST00000569784	ABCA10	Q8WWZ4	1543 aa		15.02	□□□□□ -0.01
SCAPER-223	ENST00000569784	ARAP1	Q96P48	1450 aa		15.01	□□□□□ -0.01
SCAPER-223	ENST00000569784	SLC4A1AP	Q9BWU0	796 aa	Known RBP	14.99	□□□□□ -0.01
SCAPER-223	ENST00000569784	ABCA5	Q8WWZ7	1642 aa		14.99	□□□□□ -0.01
SCAPER-223	ENST00000569784	CLASP1	Q7Z460	1538 aa		14.98	□□□□□ -0.01
SCAPER-223	ENST00000569784	DCAF8L1	A6NGE4	600 aa		14.98	□□□□□ -0.01
SCAPER-223	ENST00000569784	BIVM-ERCC5	R4GMW8	1640 aa		14.97	□□□□□ -0.01
SCAPER-223	ENST00000569784	TOP2B	Q02880	1626 aa		14.96	□□□□□ -0.01
SCAPER-223	ENST00000569784	GRIN2A	Q12879	1464 aa		14.9	□□□□□ -0.02
SCAPER-223	ENST00000569784	ADAMTS12	P58397	1594 aa		14.9	□□□□□ -0.02
SCAPER-223	ENST00000569784	FHAD1	B1AJZ9	1412 aa		14.87	□□□□□ -0.03
SCAPER-223	ENST00000569784	ERICH3	Q5RHP9	1530 aa		14.85	□□□□□ -0.03
SCAPER-223	ENST00000569784	CEP170	Q5SW79	1584 aa		14.83	□□□□□ -0.04
SCAPER-223	ENST00000569784	NUP160	Q12769	1436 aa		14.79	□□□□□ -0.04
SCAPER-223	ENST00000569784	ERCC6L2	Q5T890	1561 aa		14.77	□□□□□ -0.05
SCAPER-223	ENST00000569784	PRG4	Q92954	1404 aa	Predicted RBP	14.74	□□□□□ -0.05
SCAPER-223	ENST00000569784	SHROOM2	Q13796	1616 aa		14.74	□□□□□ -0.05
SCAPER-223	ENST00000569784	SLC4A2	P04920	1241 aa		14.73	□□□□□ -0.05
SCAPER-223	ENST00000569784	JPH4	Q96JJ6	628 aa		14.73	□□□□□ -0.05
SCAPER-223	ENST00000569784	KIF27	Q86VH2	1401 aa		14.73	□□□□□ -0.05
SCAPER-223	ENST00000569784	NPM1	P06748	294 aa	Known RBP eCLIP	14.72	□□□□□ -0.05
SCAPER-223	ENST00000569784	CUL7	Q14999	1698 aa		14.7	□□□□□ -0.06
SCAPER-223	ENST00000569784	RUSC2	Q8N2Y8	1516 aa		14.68	□□□□□ -0.06
SCAPER-223	ENST00000569784	TTBK1	Q5TCY1	1321 aa	Predicted RBP	14.66	□□□□□ -0.06
SCAPER-223	ENST00000569784	IGF1R	P08069	1367 aa		14.62	□□□□□ -0.07
SCAPER-223	ENST00000569784	ZBTB22	O15209	634 aa		14.62	□□□□□ -0.07
SCAPER-223	ENST00000569784	KIAA0586	Q9BVV6	1533 aa		14.61	□□□□□ -0.07
SCAPER-223	ENST00000569784	CARMIL1	Q5VZK9	1371 aa		14.6	□□□□□ -0.07
SCAPER-223	ENST00000569784	EHMT2	Q96KQ7	1210 aa		14.58	□□□□□ -0.08
SCAPER-223	ENST00000569784	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	14.58	□□□□□ -0.08
SCAPER-223	ENST00000569784	CARMIL2	Q6F5E8	1435 aa		14.57	□□□□□ -0.08
SCAPER-223	ENST00000569784	FAM69C	Q0P6D2	419 aa		14.56	□□□□□ -0.08
SCAPER-223	ENST00000569784	KIF13A	Q9H1H9	1805 aa		14.56	□□□□□ -0.08
SCAPER-223	ENST00000569784	IQGAP2	Q13576	1575 aa		14.52	□□□□□ -0.08
SCAPER-223	ENST00000569784	PTPRG	P23470	1445 aa		14.52	□□□□□ -0.08
SCAPER-223	ENST00000569784	ADCY10	Q96PN6	1610 aa		14.52	□□□□□ -0.09
SCAPER-223	ENST00000569784	TNIK	Q9UKE5	1360 aa		14.49	□□□□□ -0.09
SCAPER-223	ENST00000569784	MAPKBP1	O60336	1514 aa		14.49	□□□□□ -0.09
SCAPER-223	ENST00000569784	RAPGEF2	Q9Y4G8	1499 aa		14.49	□□□□□ -0.09
SCAPER-223	ENST00000569784	TSPOAP1	O95153	1857 aa		14.48	□□□□□ -0.09
SCAPER-223	ENST00000569784	CSRNP3	Q8WYN3	585 aa		14.48	□□□□□ -0.09
SCAPER-223	ENST00000569784	FOXD4L1	Q9NU39	408 aa		14.48	□□□□□ -0.09
SCAPER-223	ENST00000569784	ABCC10	Q5T3U5	1492 aa		14.48	□□□□□ -0.09
SCAPER-223	ENST00000569784	FAM9A	Q8IZU1	332 aa	Predicted RBP	14.45	□□□□□ -0.1
SCAPER-223	ENST00000569784	DIP2B	Q9P265	1576 aa		14.45	□□□□□ -0.1
SCAPER-223	ENST00000569784	RNF39	Q9H2S5	420 aa		14.43	□□□□□ -0.1
SCAPER-223	ENST00000569784		U3KPZ7	1027 aa	Predicted RBP	14.43	□□□□□ -0.1
SCAPER-223	ENST00000569784	CTTNBP2	Q8WZ74	1663 aa		14.42	□□□□□ -0.1
SCAPER-223	ENST00000569784	KDM6B	O15054	1643 aa		14.41	□□□□□ -0.1
SCAPER-223	ENST00000569784	ABCC2	Q92887	1545 aa		14.4	□□□□□ -0.1
SCAPER-223	ENST00000569784	UACA	Q9BZF9	1416 aa		14.4	□□□□□ -0.1
SCAPER-223	ENST00000569784	PLB1	Q6P1J6	1458 aa		14.38	□□□□□ -0.11
SCAPER-223	ENST00000569784	KIAA0556	O60303	1618 aa		14.37	□□□□□ -0.11
SCAPER-223	ENST00000569784	UGGT2	Q9NYU1	1516 aa		14.36	□□□□□ -0.11
SCAPER-223	ENST00000569784	ASXL2	Q76L83	1435 aa		14.36	□□□□□ -0.11
SCAPER-223	ENST00000569784	GOLGA3	Q08378	1498 aa		14.36	□□□□□ -0.11
SCAPER-223	ENST00000569784	DISP1	Q96F81	1524 aa		14.36	□□□□□ -0.11
SCAPER-223	ENST00000569784	UHRF1BP1L	A0JNW5	1464 aa		14.34	□□□□□ -0.11
SCAPER-223	ENST00000569784	ZCCHC11	Q5TAX3	1644 aa	Known RBP	14.32	□□□□□ -0.12
SCAPER-223	ENST00000569784	GLI2	P10070	1586 aa		14.28	□□□□□ -0.12
SCAPER-223	ENST00000569784	KDM5B	Q9UGL1	1544 aa		14.27	□□□□□ -0.12
SCAPER-223	ENST00000569784	TEX14	Q8IWB6	1497 aa		14.27	□□□□□ -0.12
SCAPER-223	ENST00000569784	RANGAP1	P46060	587 aa	Predicted RBP	14.27	□□□□□ -0.13
SCAPER-223	ENST00000569784	P3H3	Q8IVL6	736 aa		14.27	□□□□□ -0.13
SCAPER-223	ENST00000569784	MYCN	P04198	464 aa	Predicted RBP	14.26	□□□□□ -0.13
SCAPER-223	ENST00000569784	KCNH8	Q96L42	1107 aa		14.26	□□□□□ -0.13
SCAPER-223	ENST00000569784	EPRS	P07814	1512 aa	Known RBP	14.25	□□□□□ -0.13
SCAPER-223	ENST00000569784	PRX	Q9BXM0	1461 aa		14.25	□□□□□ -0.13
SCAPER-223	ENST00000569784	ARID3C	A6NKF2	412 aa		14.24	□□□□□ -0.13
SCAPER-223	ENST00000569784	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	14.24	□□□□□ -0.13
SCAPER-223	ENST00000569784	HNRNPUL2	Q1KMD3	747 aa	Known RBP	14.24	□□□□□ -0.13
SCAPER-223	ENST00000569784	WDR7	Q9Y4E6	1490 aa		14.23	□□□□□ -0.13
SCAPER-223	ENST00000569784	MAP3K4	Q9Y6R4	1608 aa		14.23	□□□□□ -0.13
SCAPER-223	ENST00000569784	PPRC1	Q5VV67	1664 aa	Known RBP	14.22	□□□□□ -0.13
SCAPER-223	ENST00000569784	ABCA8	O94911	1581 aa		14.19	□□□□□ -0.14
SCAPER-223	ENST00000569784	EEA1	Q15075	1411 aa		14.19	□□□□□ -0.14
SCAPER-223	ENST00000569784	C1QBP	Q07021	282 aa	Known RBP	14.19	□□□□□ -0.14
SCAPER-223	ENST00000569784	CFAP43	Q8NDM7	1665 aa		14.17	□□□□□ -0.14
SCAPER-223	ENST00000569784	CD109	Q6YHK3	1445 aa		14.17	□□□□□ -0.14
SCAPER-223	ENST00000569784	KDM4F	A0A1W2PPD8	638 aa		14.14	□□□□□ -0.15
SCAPER-223	ENST00000569784	RAPGEF6	Q8TEU7	1601 aa		14.13	□□□□□ -0.15
SCAPER-223	ENST00000569784	SAMD9	Q5K651	1589 aa		14.1	□□□□□ -0.15
SCAPER-223	ENST00000569784	ADGRL1	O94910	1474 aa		14.1	□□□□□ -0.15
SCAPER-223	ENST00000569784	MAGI3	Q5TCQ9	1506 aa		14.1	□□□□□ -0.15
SCAPER-223	ENST00000569784	UBTF	P17480	764 aa	Known RBP	14.09	□□□□□ -0.15
SCAPER-223	ENST00000569784	ATP10B	O94823	1461 aa		14.08	□□□□□ -0.16
SCAPER-223	ENST00000569784	COL17A1	Q9UMD9	1497 aa	Predicted RBP	14.08	□□□□□ -0.16
SCAPER-223	ENST00000569784	ATP1B4	Q9UN42	357 aa	Predicted RBP	14.08	□□□□□ -0.16
SCAPER-223	ENST00000569784	SPINK5	Q9NQ38	1064 aa	Predicted RBP	14.07	□□□□□ -0.16
SCAPER-223	ENST00000569784	FHOD3	Q2V2M9	1422 aa		14.07	□□□□□ -0.16
SCAPER-223	ENST00000569784	PLEKHD1	A6NEE1	506 aa		14.06	□□□□□ -0.16
SCAPER-223	ENST00000569784	ATF5	Q9Y2D1	282 aa	Predicted RBP	14.06	□□□□□ -0.16
SCAPER-223	ENST00000569784	KIF21B	O75037	1637 aa		14.05	□□□□□ -0.16
SCAPER-223	ENST00000569784	SAMD1	Q6SPF0	538 aa	Predicted RBP	14.05	□□□□□ -0.16
SCAPER-223	ENST00000569784	CACNB1	Q02641	598 aa	Predicted RBP	14.03	□□□□□ -0.16
SCAPER-223	ENST00000569784	EFCAB5	A4FU69	1503 aa		14.03	□□□□□ -0.16
SCAPER-223	ENST00000569784	ABCA9	Q8IUA7	1624 aa		14.03	□□□□□ -0.16

Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms