RNA–Protein interactions for RNA: ENST00000569768.1

THUMPD1-204, Transcript of THUMP domain containing 1, humanhuman

TSL 2

Gene THUMPD1, Length 635 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-204ENST00000569768 KIAA0586Q9BVV6 1533 aa23.75■■□□□ 1.39
THUMPD1-204ENST00000569768 CEP162Q5TB80 1403 aa23.74■■□□□ 1.39
THUMPD1-204ENST00000569768 CEP170Q5SW79 1584 aa23.74■■□□□ 1.39
THUMPD1-204ENST00000569768 IQGAP2Q13576 1575 aa23.7■■□□□ 1.38
THUMPD1-204ENST00000569768 FBLN2P98095 1184 aa23.69■■□□□ 1.38
THUMPD1-204ENST00000569768 CLIP1P30622 1438 aa23.67■■□□□ 1.38
THUMPD1-204ENST00000569768 EFCAB5A4FU69 1503 aa23.65■■□□□ 1.38
THUMPD1-204ENST00000569768 UGGT2Q9NYU1 1516 aa23.64■■□□□ 1.37
THUMPD1-204ENST00000569768 SAMD9Q5K651 1589 aa23.59■■□□□ 1.37
THUMPD1-204ENST00000569768 CLASP1Q7Z460 1538 aa23.59■■□□□ 1.37
THUMPD1-204ENST00000569768 ARHGAP35Q9NRY4 1499 aa23.58■■□□□ 1.37
THUMPD1-204ENST00000569768 SHROOM2Q13796 1616 aa23.54■■□□□ 1.36
THUMPD1-204ENST00000569768 ARAP1Q96P48 1450 aa23.49■■□□□ 1.35
THUMPD1-204ENST00000569768 JPH4Q96JJ6 628 aa23.49■■□□□ 1.35
THUMPD1-204ENST00000569768 DISP1Q96F81 1524 aa23.48■■□□□ 1.35
THUMPD1-204ENST00000569768 OSCARQ8IYS5 282 aa23.47■■□□□ 1.35
THUMPD1-204ENST00000569768 KIAA0556O60303 1618 aa23.47■■□□□ 1.35
THUMPD1-204ENST00000569768 CARMIL2Q6F5E8 1435 aa23.45■■□□□ 1.34
THUMPD1-204ENST00000569768 VPS8Q8N3P4 1428 aa23.44■■□□□ 1.34
THUMPD1-204ENST00000569768 RANGAP1P46060 587 aaPredicted RBP23.41■■□□□ 1.34
THUMPD1-204ENST00000569768 FHOD3Q2V2M9 1422 aa23.4■■□□□ 1.34
THUMPD1-204ENST00000569768 FMN1Q68DA7 1419 aa23.4■■□□□ 1.34
THUMPD1-204ENST00000569768 PRG4Q92954 1404 aaPredicted RBP23.38■■□□□ 1.33
THUMPD1-204ENST00000569768 P3H3Q8IVL6 736 aa23.29■■□□□ 1.32
THUMPD1-204ENST00000569768 CASKIN1Q8WXD9 1431 aa23.28■■□□□ 1.32
THUMPD1-204ENST00000569768 FYCO1Q9BQS8 1478 aa23.28■■□□□ 1.32
THUMPD1-204ENST00000569768 PCF11O94913 1555 aaKnown RBP23.24■■□□□ 1.31
THUMPD1-204ENST00000569768 ERCC6L2Q5T890 1561 aa23.23■■□□□ 1.31
THUMPD1-204ENST00000569768 MAP3K1Q13233 1512 aa23.22■■□□□ 1.31
THUMPD1-204ENST00000569768 PTPRGP23470 1445 aa23.21■■□□□ 1.31
THUMPD1-204ENST00000569768 HECW1Q76N89 1606 aa23.19■■□□□ 1.3
THUMPD1-204ENST00000569768 ABCA8O94911 1581 aa23.18■■□□□ 1.3
THUMPD1-204ENST00000569768 RAPGEF6Q8TEU7 1601 aa23.18■■□□□ 1.3
THUMPD1-204ENST00000569768 CCDC18Q5T9S5 1454 aa23.13■■□□□ 1.29
THUMPD1-204ENST00000569768 ARHGEF11O15085 1522 aa23.12■■□□□ 1.29
THUMPD1-204ENST00000569768 PLB1Q6P1J6 1458 aa23.11■■□□□ 1.29
THUMPD1-204ENST00000569768 UACAQ9BZF9 1416 aa23.11■■□□□ 1.29
THUMPD1-204ENST00000569768 CFAP43Q8NDM7 1665 aa23.11■■□□□ 1.29
THUMPD1-204ENST00000569768 UHRF1BP1LA0JNW5 1464 aa23.11■■□□□ 1.29
THUMPD1-204ENST00000569768 TIAM1Q13009 1591 aa23.1■■□□□ 1.29
THUMPD1-204ENST00000569768 APLP2Q06481 763 aa23.1■■□□□ 1.29
THUMPD1-204ENST00000569768 NUP153P49790 1475 aaKnown RBP23.1■■□□□ 1.29
THUMPD1-204ENST00000569768 EPRSP07814 1512 aaKnown RBP23.08■■□□□ 1.28
THUMPD1-204ENST00000569768 ABCC2Q92887 1545 aa23.08■■□□□ 1.28
THUMPD1-204ENST00000569768 LRRIQ1Q96JM4 1722 aa23.05■■□□□ 1.28
THUMPD1-204ENST00000569768 RIMBP3CA6NJZ7 1639 aa23.01■■□□□ 1.27
THUMPD1-204ENST00000569768 RIMBP3BA6NNM3 1639 aa23.01■■□□□ 1.27
THUMPD1-204ENST00000569768 RIMBP3Q9UFD9 1639 aa23.01■■□□□ 1.27
THUMPD1-204ENST00000569768 TTBK1Q5TCY1 1321 aaPredicted RBP22.99■■□□□ 1.27
THUMPD1-204ENST00000569768 LRRC9Q6ZRR7 1453 aa22.98■■□□□ 1.27
THUMPD1-204ENST00000569768 ATP1B4Q9UN42 357 aaPredicted RBP22.97■■□□□ 1.27
THUMPD1-204ENST00000569768 KDM5BQ9UGL1 1544 aa22.97■■□□□ 1.27
THUMPD1-204ENST00000569768 ATP10BO94823 1461 aa22.96■■□□□ 1.27
THUMPD1-204ENST00000569768 CDK13Q14004 1512 aaKnown RBP22.96■■□□□ 1.27
THUMPD1-204ENST00000569768 ADCY10Q96PN6 1610 aa22.94■■□□□ 1.26
THUMPD1-204ENST00000569768 EHBP1L1Q8N3D4 1523 aa22.94■■□□□ 1.26
THUMPD1-204ENST00000569768 CDK11AQ9UQ88 783 aaPredicted RBP22.92■■□□□ 1.26
THUMPD1-204ENST00000569768 KANK4Q5T7N3 995 aaPredicted RBP22.9■■□□□ 1.26
THUMPD1-204ENST00000569768 MTUS2Q5JR59 1369 aa22.89■■□□□ 1.25
THUMPD1-204ENST00000569768 MAGI3Q5TCQ9 1506 aa22.87■■□□□ 1.25
THUMPD1-204ENST00000569768 ZCCHC11Q5TAX3 1644 aaKnown RBP22.86■■□□□ 1.25
THUMPD1-204ENST00000569768 TROQ12816 1431 aaPredicted RBP22.86■■□□□ 1.25
THUMPD1-204ENST00000569768 SUPT6HQ7KZ85 1726 aaKnown RBP22.82■■□□□ 1.24
THUMPD1-204ENST00000569768 PLEKHD1A6NEE1 506 aa22.81■■□□□ 1.24
THUMPD1-204ENST00000569768 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.8■■□□□ 1.24
THUMPD1-204ENST00000569768 HNRNPUL2Q1KMD3 747 aaKnown RBP22.8■■□□□ 1.24
THUMPD1-204ENST00000569768 ARID3CA6NKF2 412 aa22.78■■□□□ 1.24
THUMPD1-204ENST00000569768 NCOA2Q15596 1464 aa22.77■■□□□ 1.24
THUMPD1-204ENST00000569768 CYB5RLQ6IPT4 315 aa22.76■■□□□ 1.23
THUMPD1-204ENST00000569768 PPARGC1BQ86YN6 1023 aaKnown RBP22.76■■□□□ 1.23
THUMPD1-204ENST00000569768 NPM1P06748 294 aaKnown RBP eCLIP22.75■■□□□ 1.23
THUMPD1-204ENST00000569768 KIF14Q15058 1648 aa22.75■■□□□ 1.23
THUMPD1-204ENST00000569768 WDR7Q9Y4E6 1490 aa22.73■■□□□ 1.23
THUMPD1-204ENST00000569768 MAPKBP1O60336 1514 aa22.72■■□□□ 1.23
THUMPD1-204ENST00000569768 DNAJC5Q9H3Z4 198 aa22.71■■□□□ 1.23
THUMPD1-204ENST00000569768 PHLDB1Q86UU1 1377 aa22.7■■□□□ 1.22
THUMPD1-204ENST00000569768 RRBP1Q9P2E9 1410 aaKnown RBP22.7■■□□□ 1.22
THUMPD1-204ENST00000569768 ABCC10Q5T3U5 1492 aa22.69■■□□□ 1.22
THUMPD1-204ENST00000569768 TRIM26Q12899 539 aaPredicted RBP22.69■■□□□ 1.22
THUMPD1-204ENST00000569768 MYOM3Q5VTT5 1437 aa22.68■■□□□ 1.22
THUMPD1-204ENST00000569768 ASXL2Q76L83 1435 aa22.68■■□□□ 1.22
THUMPD1-204ENST00000569768 MIA2Q96PC5 1412 aa22.65■■□□□ 1.22
THUMPD1-204ENST00000569768 ITSN2Q9NZM3 1697 aa22.64■■□□□ 1.21
THUMPD1-204ENST00000569768 CCNB3Q8WWL7 1395 aa22.63■■□□□ 1.21
THUMPD1-204ENST00000569768 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.63■■□□□ 1.21
THUMPD1-204ENST00000569768 FGD6Q6ZV73 1430 aa22.62■■□□□ 1.21
THUMPD1-204ENST00000569768 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.62■■□□□ 1.215e-6■■■■□ 19.7
THUMPD1-204ENST00000569768 GPATCH8Q9UKJ3 1502 aaKnown RBP22.6■■□□□ 1.21
THUMPD1-204ENST00000569768 ABCA9Q8IUA7 1624 aa22.59■■□□□ 1.21
THUMPD1-204ENST00000569768 ARAP3Q8WWN8 1544 aa22.58■■□□□ 1.21
THUMPD1-204ENST00000569768 TCOF1Q13428 1488 aaKnown RBP22.57■■□□□ 1.2
THUMPD1-204ENST00000569768 TTC37Q6PGP7 1564 aa22.57■■□□□ 1.2
THUMPD1-204ENST00000569768 CDC42BPAQ5VT25 1732 aa22.56■■□□□ 1.2
THUMPD1-204ENST00000569768 PREX2Q70Z35 1606 aa22.56■■□□□ 1.2
THUMPD1-204ENST00000569768 GLI2P10070 1586 aa22.54■■□□□ 1.2
THUMPD1-204ENST00000569768 MYO5CQ9NQX4 1742 aa22.53■■□□□ 1.2
THUMPD1-204ENST00000569768 PTPN23Q9H3S7 1636 aa22.53■■□□□ 1.2
THUMPD1-204ENST00000569768 PLCH2O75038 1416 aa22.51■■□□□ 1.19
THUMPD1-204ENST00000569768 KCNH8Q96L42 1107 aa22.51■■□□□ 1.19
THUMPD1-204ENST00000569768 CDC42BPBQ9Y5S2 1711 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms