RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-221ENST00000569720 CUL7Q14999 1698 aa22.88■■□□□ 1.25
SPG7-221ENST00000569720 IGF1RP08069 1367 aa22.84■■□□□ 1.25
SPG7-221ENST00000569720 KIAA0586Q9BVV6 1533 aa22.79■■□□□ 1.24
SPG7-221ENST00000569720 NPM1P06748 294 aaKnown RBP eCLIP22.73■■□□□ 1.23
SPG7-221ENST00000569720 CARMIL1Q5VZK9 1371 aa22.73■■□□□ 1.23
SPG7-221ENST00000569720 KIF13AQ9H1H9 1805 aa22.73■■□□□ 1.23
SPG7-221ENST00000569720 ADCY10Q96PN6 1610 aa22.66■■□□□ 1.22
SPG7-221ENST00000569720 MAPKBP1O60336 1514 aa22.64■■□□□ 1.21
SPG7-221ENST00000569720 CARMIL2Q6F5E8 1435 aa22.61■■□□□ 1.21
SPG7-221ENST00000569720 ABCC10Q5T3U5 1492 aa22.6■■□□□ 1.21
SPG7-221ENST00000569720 IQGAP2Q13576 1575 aa22.6■■□□□ 1.21
SPG7-221ENST00000569720 FAM69CQ0P6D2 419 aa22.6■■□□□ 1.21
SPG7-221ENST00000569720 AEBP2Q6ZN18 517 aaPredicted RBP22.6■■□□□ 1.21
SPG7-221ENST00000569720 PTPRGP23470 1445 aa22.58■■□□□ 1.21
SPG7-221ENST00000569720 DIP2BQ9P265 1576 aa22.56■■□□□ 1.2
SPG7-221ENST00000569720 TNIKQ9UKE5 1360 aa22.54■■□□□ 1.2
SPG7-221ENST00000569720 TTBK1Q5TCY1 1321 aaPredicted RBP22.54■■□□□ 1.2
SPG7-221ENST00000569720 RAPGEF2Q9Y4G8 1499 aa22.53■■□□□ 1.2
SPG7-221ENST00000569720 ABCC2Q92887 1545 aa22.46■■□□□ 1.19
SPG7-221ENST00000569720 TSPOAP1O95153 1857 aa22.45■■□□□ 1.19
SPG7-221ENST00000569720 DISP1Q96F81 1524 aa22.44■■□□□ 1.18
SPG7-221ENST00000569720 UGGT2Q9NYU1 1516 aa22.43■■□□□ 1.18
SPG7-221ENST00000569720 UHRF1BP1LA0JNW5 1464 aa22.41■■□□□ 1.18
SPG7-221ENST00000569720 UACAQ9BZF9 1416 aa22.41■■□□□ 1.18
SPG7-221ENST00000569720 CTTNBP2Q8WZ74 1663 aa22.39■■□□□ 1.18
SPG7-221ENST00000569720 PLB1Q6P1J6 1458 aa22.39■■□□□ 1.17
SPG7-221ENST00000569720 KDM6BO15054 1643 aa22.39■■□□□ 1.17
SPG7-221ENST00000569720 KIAA0556O60303 1618 aa22.38■■□□□ 1.17
SPG7-221ENST00000569720 ASXL2Q76L83 1435 aa22.37■■□□□ 1.17
SPG7-221ENST00000569720 GLI2P10070 1586 aa22.33■■□□□ 1.16
SPG7-221ENST00000569720 KDM5BQ9UGL1 1544 aa22.31■■□□□ 1.16
SPG7-221ENST00000569720 GOLGA3Q08378 1498 aa22.29■■□□□ 1.16
SPG7-221ENST00000569720 ZCCHC11Q5TAX3 1644 aaKnown RBP22.29■■□□□ 1.16
SPG7-221ENST00000569720 PRXQ9BXM0 1461 aa22.27■■□□□ 1.16
SPG7-221ENST00000569720 PPRC1Q5VV67 1664 aaKnown RBP22.24■■□□□ 1.15
SPG7-221ENST00000569720 EPRSP07814 1512 aaKnown RBP22.23■■□□□ 1.15
SPG7-221ENST00000569720 MAP3K4Q9Y6R4 1608 aa22.2■■□□□ 1.15
SPG7-221ENST00000569720 FAM9AQ8IZU1 332 aaPredicted RBP22.18■■□□□ 1.14
SPG7-221ENST00000569720 TEX14Q8IWB6 1497 aa22.16■■□□□ 1.14
SPG7-221ENST00000569720 WDR7Q9Y4E6 1490 aa22.16■■□□□ 1.14
SPG7-221ENST00000569720 ABCA8O94911 1581 aa22.16■■□□□ 1.14
SPG7-221ENST00000569720 CSRNP3Q8WYN3 585 aa22.13■■□□□ 1.13
SPG7-221ENST00000569720 CFAP43Q8NDM7 1665 aa22.08■■□□□ 1.13
SPG7-221ENST00000569720 KDM4FA0A1W2PPD8 638 aa22.08■■□□□ 1.13
SPG7-221ENST00000569720 EEA1Q15075 1411 aa22.07■■□□□ 1.12
SPG7-221ENST00000569720 KCNH8Q96L42 1107 aa22.06■■□□□ 1.12
SPG7-221ENST00000569720 P3H3Q8IVL6 736 aa22.05■■□□□ 1.12
SPG7-221ENST00000569720 COL17A1Q9UMD9 1497 aaPredicted RBP22.04■■□□□ 1.12
SPG7-221ENST00000569720 CD109Q6YHK3 1445 aa22.04■■□□□ 1.12
SPG7-221ENST00000569720 SAMD9Q5K651 1589 aa22.03■■□□□ 1.12
SPG7-221ENST00000569720 MAGI3Q5TCQ9 1506 aa22.01■■□□□ 1.11
SPG7-221ENST00000569720 ATP10BO94823 1461 aa21.96■■□□□ 1.11
SPG7-221ENST00000569720 RAPGEF6Q8TEU7 1601 aa21.96■■□□□ 1.11
SPG7-221ENST00000569720 ARID3CA6NKF2 412 aa21.96■■□□□ 1.11
SPG7-221ENST00000569720 ADGRL1O94910 1474 aa21.95■■□□□ 1.1
SPG7-221ENST00000569720 RANGAP1P46060 587 aaPredicted RBP21.91■■□□□ 1.1
SPG7-221ENST00000569720 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.9■■□□□ 1.1
SPG7-221ENST00000569720 HNRNPUL2Q1KMD3 747 aaKnown RBP21.9■■□□□ 1.1
SPG7-221ENST00000569720 KIF21BO75037 1637 aa21.88■■□□□ 1.09
SPG7-221ENST00000569720 ABCA9Q8IUA7 1624 aa21.88■■□□□ 1.09
SPG7-221ENST00000569720 FHOD3Q2V2M9 1422 aa21.86■■□□□ 1.09
SPG7-221ENST00000569720 ARAP3Q8WWN8 1544 aa21.84■■□□□ 1.09
SPG7-221ENST00000569720 PHLDB1Q86UU1 1377 aa21.84■■□□□ 1.09
SPG7-221ENST00000569720 EFCAB5A4FU69 1503 aa21.83■■□□□ 1.09
SPG7-221ENST00000569720 NUP153P49790 1475 aaKnown RBP21.83■■□□□ 1.08
SPG7-221ENST00000569720 NEO1Q92859 1461 aa21.77■■□□□ 1.08
SPG7-221ENST00000569720 PLEKHD1A6NEE1 506 aa21.77■■□□□ 1.08
SPG7-221ENST00000569720 UBTFP17480 764 aaKnown RBP21.73■■□□□ 1.07
SPG7-221ENST00000569720 CHIC1Q5VXU3 224 aa21.71■■□□□ 1.07
SPG7-221ENST00000569720 RAPGEF3O95398 923 aa21.69■■□□□ 1.06
SPG7-221ENST00000569720 EHMT2Q96KQ7 1210 aa21.69■■□□□ 1.06
SPG7-221ENST00000569720 CFAP74Q9C0B2 1584 aa21.67■■□□□ 1.06
SPG7-221ENST00000569720 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.65■■□□□ 1.06
SPG7-221ENST00000569720 FMN1Q68DA7 1419 aa21.64■■□□□ 1.06
SPG7-221ENST00000569720 HECW2Q9P2P5 1572 aa21.64■■□□□ 1.05
SPG7-221ENST00000569720 FRMPD1Q5SYB0 1578 aa21.63■■□□□ 1.05
SPG7-221ENST00000569720 CDK13Q14004 1512 aaKnown RBP21.63■■□□□ 1.05
SPG7-221ENST00000569720 HECW1Q76N89 1606 aa21.62■■□□□ 1.05
SPG7-221ENST00000569720 FANCAO15360 1455 aa21.62■■□□□ 1.05
SPG7-221ENST00000569720 DENND4BO75064 1496 aaPredicted RBP21.62■■□□□ 1.05
SPG7-221ENST00000569720 AKNAQ7Z591 1439 aa21.62■■□□□ 1.05
SPG7-221ENST00000569720 TTC37Q6PGP7 1564 aa21.61■■□□□ 1.05
SPG7-221ENST00000569720 ATP1B4Q9UN42 357 aaPredicted RBP21.61■■□□□ 1.05
SPG7-221ENST00000569720 RICTORQ6R327 1708 aa21.6■■□□□ 1.05
SPG7-221ENST00000569720 ARHGAP35Q9NRY4 1499 aa21.59■■□□□ 1.05
SPG7-221ENST00000569720 ADAMTSL3P82987 1691 aa21.58■■□□□ 1.05
SPG7-221ENST00000569720 ARID4BQ4LE39 1312 aaPredicted RBP21.57■■□□□ 1.04
SPG7-221ENST00000569720 CDK11AQ9UQ88 783 aaPredicted RBP21.57■■□□□ 1.04
SPG7-221ENST00000569720 ARHGEF40Q8TER5 1519 aa21.55■■□□□ 1.04
SPG7-221ENST00000569720 BCORL1Q5H9F3 1711 aa21.55■■□□□ 1.04
SPG7-221ENST00000569720 MYO5CQ9NQX4 1742 aa21.52■■□□□ 1.03
SPG7-221ENST00000569720 PTPRMP28827 1452 aa21.52■■□□□ 1.03
SPG7-221ENST00000569720 PLCH2O75038 1416 aa21.51■■□□□ 1.03
SPG7-221ENST00000569720 ZMYM4Q5VZL5 1548 aa21.5■■□□□ 1.03
SPG7-221ENST00000569720 MADDQ8WXG6 1647 aa21.49■■□□□ 1.03
SPG7-221ENST00000569720 KIF14Q15058 1648 aa21.48■■□□□ 1.03
SPG7-221ENST00000569720 ZFYVE16Q7Z3T8 1539 aa21.48■■□□□ 1.03
SPG7-221ENST00000569720 MAGI2Q86UL8 1455 aa21.47■■□□□ 1.03
SPG7-221ENST00000569720 CLIP1P30622 1438 aa21.46■■□□□ 1.03
SPG7-221ENST00000569720 SCAPERQ9BY12 1400 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms