RNA–Protein interactions for RNA: ENST00000569251.5

SCAMP2-211, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 867 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-211ENST00000569251 JPH4Q96JJ6 628 aa22.42■■□□□ 1.18
SCAMP2-211ENST00000569251 PRG4Q92954 1404 aaPredicted RBP22.41■■□□□ 1.18
SCAMP2-211ENST00000569251 KIAA0586Q9BVV6 1533 aa22.34■■□□□ 1.17
SCAMP2-211ENST00000569251 CARMIL1Q5VZK9 1371 aa22.3■■□□□ 1.16
SCAMP2-211ENST00000569251 KIF13AQ9H1H9 1805 aa22.26■■□□□ 1.15
SCAMP2-211ENST00000569251 ADCY10Q96PN6 1610 aa22.2■■□□□ 1.14
SCAMP2-211ENST00000569251 IQGAP2Q13576 1575 aa22.17■■□□□ 1.14
SCAMP2-211ENST00000569251 RAPGEF2Q9Y4G8 1499 aa22.13■■□□□ 1.13
SCAMP2-211ENST00000569251 MAPKBP1O60336 1514 aa22.12■■□□□ 1.13
SCAMP2-211ENST00000569251 CARMIL2Q6F5E8 1435 aa22.09■■□□□ 1.13
SCAMP2-211ENST00000569251 NPM1P06748 294 aaKnown RBP eCLIP22.09■■□□□ 1.13
SCAMP2-211ENST00000569251 PTPRGP23470 1445 aa22.08■■□□□ 1.13
SCAMP2-211ENST00000569251 ABCC10Q5T3U5 1492 aa22.07■■□□□ 1.12
SCAMP2-211ENST00000569251 TNIKQ9UKE5 1360 aa22.06■■□□□ 1.12
SCAMP2-211ENST00000569251 DIP2BQ9P265 1576 aa22.05■■□□□ 1.12
SCAMP2-211ENST00000569251 DISP1Q96F81 1524 aa22.05■■□□□ 1.12
SCAMP2-211ENST00000569251 CTTNBP2Q8WZ74 1663 aa22.04■■□□□ 1.12
SCAMP2-211ENST00000569251 UGGT2Q9NYU1 1516 aa22.03■■□□□ 1.12
SCAMP2-211ENST00000569251 FAM69CQ0P6D2 419 aa22■■□□□ 1.11
SCAMP2-211ENST00000569251 TTBK1Q5TCY1 1321 aaPredicted RBP21.98■■□□□ 1.11
SCAMP2-211ENST00000569251 ABCC2Q92887 1545 aa21.97■■□□□ 1.11
SCAMP2-211ENST00000569251 TSPOAP1O95153 1857 aa21.97■■□□□ 1.11
SCAMP2-211ENST00000569251 KIAA0556O60303 1618 aa21.97■■□□□ 1.11
SCAMP2-211ENST00000569251 UHRF1BP1LA0JNW5 1464 aa21.96■■□□□ 1.11
SCAMP2-211ENST00000569251 PRXQ9BXM0 1461 aa21.96■■□□□ 1.11
SCAMP2-211ENST00000569251 UACAQ9BZF9 1416 aa21.93■■□□□ 1.1
SCAMP2-211ENST00000569251 PLB1Q6P1J6 1458 aa21.86■■□□□ 1.09
SCAMP2-211ENST00000569251 ASXL2Q76L83 1435 aa21.86■■□□□ 1.09
SCAMP2-211ENST00000569251 KDM5BQ9UGL1 1544 aa21.85■■□□□ 1.09
SCAMP2-211ENST00000569251 ZCCHC11Q5TAX3 1644 aaKnown RBP21.84■■□□□ 1.09
SCAMP2-211ENST00000569251 GOLGA3Q08378 1498 aa21.83■■□□□ 1.09
SCAMP2-211ENST00000569251 GLI2P10070 1586 aa21.83■■□□□ 1.09
SCAMP2-211ENST00000569251 PPRC1Q5VV67 1664 aaKnown RBP21.81■■□□□ 1.08
SCAMP2-211ENST00000569251 KDM6BO15054 1643 aa21.8■■□□□ 1.08
SCAMP2-211ENST00000569251 CSRNP3Q8WYN3 585 aa21.79■■□□□ 1.08
SCAMP2-211ENST00000569251 ABCA8O94911 1581 aa21.76■■□□□ 1.07
SCAMP2-211ENST00000569251 EPRSP07814 1512 aaKnown RBP21.75■■□□□ 1.07
SCAMP2-211ENST00000569251 MAP3K4Q9Y6R4 1608 aa21.74■■□□□ 1.07
SCAMP2-211ENST00000569251 AEBP2Q6ZN18 517 aaPredicted RBP21.74■■□□□ 1.07
SCAMP2-211ENST00000569251 EEA1Q15075 1411 aa21.73■■□□□ 1.07
SCAMP2-211ENST00000569251 SAMD9Q5K651 1589 aa21.69■■□□□ 1.06
SCAMP2-211ENST00000569251 WDR7Q9Y4E6 1490 aa21.68■■□□□ 1.06
SCAMP2-211ENST00000569251 P3H3Q8IVL6 736 aa21.62■■□□□ 1.05
SCAMP2-211ENST00000569251 CFAP43Q8NDM7 1665 aa21.62■■□□□ 1.05
SCAMP2-211ENST00000569251 TEX14Q8IWB6 1497 aa21.6■■□□□ 1.05
SCAMP2-211ENST00000569251 KIF21BO75037 1637 aa21.6■■□□□ 1.05
SCAMP2-211ENST00000569251 FAM9AQ8IZU1 332 aaPredicted RBP21.58■■□□□ 1.05
SCAMP2-211ENST00000569251 COL17A1Q9UMD9 1497 aaPredicted RBP21.58■■□□□ 1.04
SCAMP2-211ENST00000569251 RAPGEF6Q8TEU7 1601 aa21.57■■□□□ 1.04
SCAMP2-211ENST00000569251 ATP10BO94823 1461 aa21.56■■□□□ 1.04
SCAMP2-211ENST00000569251 KCNH8Q96L42 1107 aa21.54■■□□□ 1.04
SCAMP2-211ENST00000569251 MAGI3Q5TCQ9 1506 aa21.53■■□□□ 1.04
SCAMP2-211ENST00000569251 CHIC1Q5VXU3 224 aa21.52■■□□□ 1.04
SCAMP2-211ENST00000569251 CD109Q6YHK3 1445 aa21.52■■□□□ 1.04
SCAMP2-211ENST00000569251 KDM4FA0A1W2PPD8 638 aa21.49■■□□□ 1.03
SCAMP2-211ENST00000569251 ARID3CA6NKF2 412 aa21.49■■□□□ 1.03
SCAMP2-211ENST00000569251 FHOD3Q2V2M9 1422 aa21.48■■□□□ 1.03
SCAMP2-211ENST00000569251 EFCAB5A4FU69 1503 aa21.47■■□□□ 1.03
SCAMP2-211ENST00000569251 RANGAP1P46060 587 aaPredicted RBP21.47■■□□□ 1.03
SCAMP2-211ENST00000569251 ABCA9Q8IUA7 1624 aa21.46■■□□□ 1.03
SCAMP2-211ENST00000569251 NUP153P49790 1475 aaKnown RBP21.45■■□□□ 1.03
SCAMP2-211ENST00000569251 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.37■■□□□ 1.01
SCAMP2-211ENST00000569251 HNRNPUL2Q1KMD3 747 aaKnown RBP21.37■■□□□ 1.01
SCAMP2-211ENST00000569251 ARAP3Q8WWN8 1544 aa21.37■■□□□ 1.01
SCAMP2-211ENST00000569251 ADGRL1O94910 1474 aa21.36■■□□□ 1.01
SCAMP2-211ENST00000569251 UBTFP17480 764 aaKnown RBP21.35■■□□□ 1.01
SCAMP2-211ENST00000569251 EHMT2Q96KQ7 1210 aa21.33■■□□□ 1.01
SCAMP2-211ENST00000569251 PHLDB1Q86UU1 1377 aa21.31■■□□□ 1
SCAMP2-211ENST00000569251 NEO1Q92859 1461 aa21.29■■□□□ 1
SCAMP2-211ENST00000569251 ARHGAP35Q9NRY4 1499 aa21.29■■□□□ 1
SCAMP2-211ENST00000569251 PLEKHD1A6NEE1 506 aa21.29■■□□□ 1
SCAMP2-211ENST00000569251 CDK13Q14004 1512 aaKnown RBP21.25■□□□□ 0.99
SCAMP2-211ENST00000569251 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.25■□□□□ 0.99
SCAMP2-211ENST00000569251 FMN1Q68DA7 1419 aa21.25■□□□□ 0.99
SCAMP2-211ENST00000569251 HECW1Q76N89 1606 aa21.24■□□□□ 0.99
SCAMP2-211ENST00000569251 TTC37Q6PGP7 1564 aa21.23■□□□□ 0.99
SCAMP2-211ENST00000569251 FRMPD1Q5SYB0 1578 aa21.22■□□□□ 0.99
SCAMP2-211ENST00000569251 LRRIQ1Q96JM4 1722 aa21.21■□□□□ 0.99
SCAMP2-211ENST00000569251 CFAP74Q9C0B2 1584 aa21.2■□□□□ 0.98
SCAMP2-211ENST00000569251 RICTORQ6R327 1708 aa21.2■□□□□ 0.98
SCAMP2-211ENST00000569251 RAPGEF3O95398 923 aa21.19■□□□□ 0.98
SCAMP2-211ENST00000569251 FANCAO15360 1455 aa21.16■□□□□ 0.98
SCAMP2-211ENST00000569251 AKNAQ7Z591 1439 aa21.15■□□□□ 0.98
SCAMP2-211ENST00000569251 ATP1B4Q9UN42 357 aaPredicted RBP21.14■□□□□ 0.97
SCAMP2-211ENST00000569251 MYO5CQ9NQX4 1742 aa21.14■□□□□ 0.97
SCAMP2-211ENST00000569251 DENND4BO75064 1496 aaPredicted RBP21.12■□□□□ 0.97
SCAMP2-211ENST00000569251 KIF14Q15058 1648 aa21.11■□□□□ 0.97
SCAMP2-211ENST00000569251 ADAMTSL3P82987 1691 aa21.1■□□□□ 0.97
SCAMP2-211ENST00000569251 PLCH2O75038 1416 aa21.1■□□□□ 0.97
SCAMP2-211ENST00000569251 CDK11AQ9UQ88 783 aaPredicted RBP21.09■□□□□ 0.97
SCAMP2-211ENST00000569251 ARHGEF40Q8TER5 1519 aa21.08■□□□□ 0.96
SCAMP2-211ENST00000569251 BCORL1Q5H9F3 1711 aa21.07■□□□□ 0.96
SCAMP2-211ENST00000569251 PCF11O94913 1555 aaKnown RBP21.07■□□□□ 0.96
SCAMP2-211ENST00000569251 ZMYM4Q5VZL5 1548 aa21.07■□□□□ 0.96
SCAMP2-211ENST00000569251 TROQ12816 1431 aaPredicted RBP21.06■□□□□ 0.96
SCAMP2-211ENST00000569251 CASKIN1Q8WXD9 1431 aa21.05■□□□□ 0.96
SCAMP2-211ENST00000569251 HECW2Q9P2P5 1572 aa21.04■□□□□ 0.96
SCAMP2-211ENST00000569251 CDC42BPBQ9Y5S2 1711 aa21.02■□□□□ 0.96
SCAMP2-211ENST00000569251 CCDC18Q5T9S5 1454 aa21.01■□□□□ 0.95
SCAMP2-211ENST00000569251 CLIP1P30622 1438 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms