RNA–Protein interactions for RNA: ENST00000569236.5

NSMCE1-214, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE1, Length 1,782 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-214ENST00000569236 KIAA0586Q9BVV6 1533 aa20.91■□□□□ 0.94
NSMCE1-214ENST00000569236 ARAP1Q96P48 1450 aa20.9■□□□□ 0.94
NSMCE1-214ENST00000569236 CYB5RLQ6IPT4 315 aa20.89■□□□□ 0.93
NSMCE1-214ENST00000569236 CSRNP3Q8WYN3 585 aa20.87■□□□□ 0.93
NSMCE1-214ENST00000569236 JPH4Q96JJ6 628 aa20.87■□□□□ 0.93
NSMCE1-214ENST00000569236 PRXQ9BXM0 1461 aa20.87■□□□□ 0.93
NSMCE1-214ENST00000569236 ERCC6L2Q5T890 1561 aa20.86■□□□□ 0.93
NSMCE1-214ENST00000569236 PRG4Q92954 1404 aaPredicted RBP20.84■□□□□ 0.93
NSMCE1-214ENST00000569236 FAM9AQ8IZU1 332 aaPredicted RBP20.83■□□□□ 0.93
NSMCE1-214ENST00000569236 IQGAP2Q13576 1575 aa20.81■□□□□ 0.92
NSMCE1-214ENST00000569236 CTTNBP2Q8WZ74 1663 aa20.77■□□□□ 0.91
NSMCE1-214ENST00000569236 CARMIL2Q6F5E8 1435 aa20.7■□□□□ 0.9
NSMCE1-214ENST00000569236 KIF21BO75037 1637 aa20.7■□□□□ 0.9
NSMCE1-214ENST00000569236 UGGT2Q9NYU1 1516 aa20.68■□□□□ 0.9
NSMCE1-214ENST00000569236 DISP1Q96F81 1524 aa20.64■□□□□ 0.89
NSMCE1-214ENST00000569236 TNIKQ9UKE5 1360 aa20.61■□□□□ 0.89
NSMCE1-214ENST00000569236 KIAA0556O60303 1618 aa20.61■□□□□ 0.89
NSMCE1-214ENST00000569236 PTPRGP23470 1445 aa20.6■□□□□ 0.89
NSMCE1-214ENST00000569236 GOLGA3Q08378 1498 aa20.59■□□□□ 0.89
NSMCE1-214ENST00000569236 TTBK1Q5TCY1 1321 aaPredicted RBP20.58■□□□□ 0.88
NSMCE1-214ENST00000569236 EHMT2Q96KQ7 1210 aa20.56■□□□□ 0.88
NSMCE1-214ENST00000569236 UBTFP17480 764 aaKnown RBP20.53■□□□□ 0.88
NSMCE1-214ENST00000569236 ADCY10Q96PN6 1610 aa20.52■□□□□ 0.88
NSMCE1-214ENST00000569236 SAMD9Q5K651 1589 aa20.49■□□□□ 0.87
NSMCE1-214ENST00000569236 NPM1P06748 294 aaKnown RBP eCLIP20.48■□□□□ 0.87
NSMCE1-214ENST00000569236 RANGAP1P46060 587 aaPredicted RBP20.48■□□□□ 0.87
NSMCE1-214ENST00000569236 TRHP20396 242 aaPredicted RBP20.46■□□□□ 0.87
NSMCE1-214ENST00000569236 UACAQ9BZF9 1416 aa20.46■□□□□ 0.87
NSMCE1-214ENST00000569236 P3H3Q8IVL6 736 aa20.45■□□□□ 0.86
NSMCE1-214ENST00000569236 UHRF1BP1LA0JNW5 1464 aa20.43■□□□□ 0.86
NSMCE1-214ENST00000569236 ABCC2Q92887 1545 aa20.43■□□□□ 0.86
NSMCE1-214ENST00000569236 EFCAB5A4FU69 1503 aa20.41■□□□□ 0.86
NSMCE1-214ENST00000569236 PLB1Q6P1J6 1458 aa20.4■□□□□ 0.86
NSMCE1-214ENST00000569236 MAPKBP1O60336 1514 aa20.38■□□□□ 0.85
NSMCE1-214ENST00000569236 ABCA8O94911 1581 aa20.36■□□□□ 0.85
NSMCE1-214ENST00000569236 FHOD3Q2V2M9 1422 aa20.36■□□□□ 0.85
NSMCE1-214ENST00000569236 KDM5BQ9UGL1 1544 aa20.34■□□□□ 0.85
NSMCE1-214ENST00000569236 ZCCHC11Q5TAX3 1644 aaKnown RBP20.31■□□□□ 0.84
NSMCE1-214ENST00000569236 ARHGAP35Q9NRY4 1499 aa20.3■□□□□ 0.84
NSMCE1-214ENST00000569236 RAPGEF6Q8TEU7 1601 aa20.29■□□□□ 0.84
NSMCE1-214ENST00000569236 KIF13AQ9H1H9 1805 aa20.28■□□□□ 0.84
NSMCE1-214ENST00000569236 ABCC10Q5T3U5 1492 aa20.28■□□□□ 0.84
NSMCE1-214ENST00000569236 ASXL2Q76L83 1435 aa20.27■□□□□ 0.84
NSMCE1-214ENST00000569236 DIP2BQ9P265 1576 aa20.25■□□□□ 0.83
NSMCE1-214ENST00000569236 FAM69CQ0P6D2 419 aa20.24■□□□□ 0.83
NSMCE1-214ENST00000569236 FMN1Q68DA7 1419 aa20.23■□□□□ 0.83
NSMCE1-214ENST00000569236 ARID3CA6NKF2 412 aa20.21■□□□□ 0.83
NSMCE1-214ENST00000569236 CLIP1P30622 1438 aa20.2■□□□□ 0.82
NSMCE1-214ENST00000569236 ATP10BO94823 1461 aa20.2■□□□□ 0.82
NSMCE1-214ENST00000569236 NUP153P49790 1475 aaKnown RBP20.2■□□□□ 0.82
NSMCE1-214ENST00000569236 WDR7Q9Y4E6 1490 aa20.19■□□□□ 0.82
NSMCE1-214ENST00000569236 LOC105371045A0A1W2PR82 267 aa20.16■□□□□ 0.82
NSMCE1-214ENST00000569236 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.16■□□□□ 0.82
NSMCE1-214ENST00000569236 HNRNPUL2Q1KMD3 747 aaKnown RBP20.16■□□□□ 0.82
NSMCE1-214ENST00000569236 EPRSP07814 1512 aaKnown RBP20.15■□□□□ 0.82
NSMCE1-214ENST00000569236 GLI2P10070 1586 aa20.15■□□□□ 0.82
NSMCE1-214ENST00000569236 HECW1Q76N89 1606 aa20.13■□□□□ 0.81
NSMCE1-214ENST00000569236 CEP162Q5TB80 1403 aa20.12■□□□□ 0.81
NSMCE1-214ENST00000569236 ATP1B4Q9UN42 357 aaPredicted RBP20.12■□□□□ 0.81
NSMCE1-214ENST00000569236 TSPOAP1O95153 1857 aa20.1■□□□□ 0.81
NSMCE1-214ENST00000569236 KCNH8Q96L42 1107 aa20.1■□□□□ 0.81
NSMCE1-214ENST00000569236 MAP3K4Q9Y6R4 1608 aa20.07■□□□□ 0.8
NSMCE1-214ENST00000569236 CDK13Q14004 1512 aaKnown RBP20.06■□□□□ 0.8
NSMCE1-214ENST00000569236 PCF11O94913 1555 aaKnown RBP20.06■□□□□ 0.8
NSMCE1-214ENST00000569236 CASKIN1Q8WXD9 1431 aa20.06■□□□□ 0.8
NSMCE1-214ENST00000569236 PLEKHD1A6NEE1 506 aa20.05■□□□□ 0.8
NSMCE1-214ENST00000569236 CFAP43Q8NDM7 1665 aa20.03■□□□□ 0.8
NSMCE1-214ENST00000569236 FYCO1Q9BQS8 1478 aa20.02■□□□□ 0.8
NSMCE1-214ENST00000569236 PPRC1Q5VV67 1664 aaKnown RBP20.02■□□□□ 0.8
NSMCE1-214ENST00000569236 LRRIQ1Q96JM4 1722 aa20.02■□□□□ 0.79
NSMCE1-214ENST00000569236 CD109Q6YHK3 1445 aa19.99■□□□□ 0.79
NSMCE1-214ENST00000569236 CDK11AQ9UQ88 783 aaPredicted RBP19.99■□□□□ 0.79
NSMCE1-214ENST00000569236 CCDC18Q5T9S5 1454 aa19.99■□□□□ 0.79
NSMCE1-214ENST00000569236 ABCA9Q8IUA7 1624 aa19.99■□□□□ 0.79
NSMCE1-214ENST00000569236 TEX14Q8IWB6 1497 aa19.98■□□□□ 0.79
NSMCE1-214ENST00000569236 MAGI3Q5TCQ9 1506 aa19.94■□□□□ 0.78
NSMCE1-214ENST00000569236 KDM6BO15054 1643 aa19.93■□□□□ 0.78
NSMCE1-214ENST00000569236 TROQ12816 1431 aaPredicted RBP19.9■□□□□ 0.78
NSMCE1-214ENST00000569236 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.9■□□□□ 0.78
NSMCE1-214ENST00000569236 TTC37Q6PGP7 1564 aa19.88■□□□□ 0.77
NSMCE1-214ENST00000569236 VPS8Q8N3P4 1428 aa19.88■□□□□ 0.77
NSMCE1-214ENST00000569236 KIF14Q15058 1648 aa19.88■□□□□ 0.77
NSMCE1-214ENST00000569236 NEO1Q92859 1461 aa19.81■□□□□ 0.76
NSMCE1-214ENST00000569236 COL17A1Q9UMD9 1497 aaPredicted RBP19.81■□□□□ 0.76
NSMCE1-214ENST00000569236 MYO5CQ9NQX4 1742 aa19.81■□□□□ 0.76
NSMCE1-214ENST00000569236 PHLDB1Q86UU1 1377 aa19.8■□□□□ 0.76
NSMCE1-214ENST00000569236 PLCH2O75038 1416 aa19.79■□□□□ 0.76
NSMCE1-214ENST00000569236 FANCAO15360 1455 aa19.79■□□□□ 0.76
NSMCE1-214ENST00000569236 CFAP74Q9C0B2 1584 aa19.79■□□□□ 0.76
NSMCE1-214ENST00000569236 MTUS2Q5JR59 1369 aa19.78■□□□□ 0.76
NSMCE1-214ENST00000569236 ARAP3Q8WWN8 1544 aa19.78■□□□□ 0.76
NSMCE1-214ENST00000569236 TIAM1Q13009 1591 aa19.75■□□□□ 0.75
NSMCE1-214ENST00000569236 EHBP1L1Q8N3D4 1523 aa19.75■□□□□ 0.75
NSMCE1-214ENST00000569236 AKNAQ7Z591 1439 aa19.74■□□□□ 0.75
NSMCE1-214ENST00000569236 ARHGAP5Q13017 1502 aa19.72■□□□□ 0.75
NSMCE1-214ENST00000569236 EFCAB2Q5VUJ9 269 aa19.71■□□□□ 0.75
NSMCE1-214ENST00000569236 PREX2Q70Z35 1606 aa19.71■□□□□ 0.75
NSMCE1-214ENST00000569236 CDC42BPBQ9Y5S2 1711 aa19.71■□□□□ 0.75
NSMCE1-214ENST00000569236 MAP3K1Q13233 1512 aa19.7■□□□□ 0.74
NSMCE1-214ENST00000569236 CDC42BPAQ5VT25 1732 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms