RNA–Protein interactions for RNA: ENST00000569045.1

CDR2-207, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 826 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-207ENST00000569045 CUL7Q14999 1698 aa28.67■■■□□ 2.18
CDR2-207ENST00000569045 RUSC2Q8N2Y8 1516 aa28.64■■■□□ 2.17
CDR2-207ENST00000569045 KIAA0586Q9BVV6 1533 aa28.56■■■□□ 2.16
CDR2-207ENST00000569045 CARMIL1Q5VZK9 1371 aa28.55■■■□□ 2.16
CDR2-207ENST00000569045 NPM1P06748 294 aaKnown RBP eCLIP28.44■■■□□ 2.14
CDR2-207ENST00000569045 CARMIL2Q6F5E8 1435 aa28.35■■■□□ 2.13
CDR2-207ENST00000569045 RAPGEF2Q9Y4G8 1499 aa28.32■■■□□ 2.12
CDR2-207ENST00000569045 IQGAP2Q13576 1575 aa28.32■■■□□ 2.12
CDR2-207ENST00000569045 PTPRGP23470 1445 aa28.29■■■□□ 2.12
CDR2-207ENST00000569045 ADCY10Q96PN6 1610 aa28.26■■■□□ 2.11
CDR2-207ENST00000569045 TNIKQ9UKE5 1360 aa28.25■■■□□ 2.11
CDR2-207ENST00000569045 TTBK1Q5TCY1 1321 aaPredicted RBP28.25■■■□□ 2.11
CDR2-207ENST00000569045 MAPKBP1O60336 1514 aa28.23■■■□□ 2.11
CDR2-207ENST00000569045 KIF13AQ9H1H9 1805 aa28.21■■■□□ 2.11
CDR2-207ENST00000569045 FAM69CQ0P6D2 419 aa28.19■■■□□ 2.1
CDR2-207ENST00000569045 ABCC10Q5T3U5 1492 aa28.18■■■□□ 2.1
CDR2-207ENST00000569045 UGGT2Q9NYU1 1516 aa28.13■■■□□ 2.09
CDR2-207ENST00000569045 DISP1Q96F81 1524 aa28.11■■■□□ 2.09
CDR2-207ENST00000569045 DIP2BQ9P265 1576 aa28.08■■■□□ 2.09
CDR2-207ENST00000569045 ABCC2Q92887 1545 aa28.08■■■□□ 2.08
CDR2-207ENST00000569045 UACAQ9BZF9 1416 aa28.06■■■□□ 2.08
CDR2-207ENST00000569045 UHRF1BP1LA0JNW5 1464 aa28.05■■■□□ 2.08
CDR2-207ENST00000569045 CTTNBP2Q8WZ74 1663 aa28.05■■■□□ 2.08
CDR2-207ENST00000569045 PRXQ9BXM0 1461 aa28.03■■■□□ 2.08
CDR2-207ENST00000569045 KIAA0556O60303 1618 aa28.03■■■□□ 2.08
CDR2-207ENST00000569045 GOLGA3Q08378 1498 aa28.01■■■□□ 2.07
CDR2-207ENST00000569045 PLB1Q6P1J6 1458 aa27.98■■■□□ 2.07
CDR2-207ENST00000569045 AEBP2Q6ZN18 517 aaPredicted RBP27.97■■■□□ 2.07
CDR2-207ENST00000569045 ASXL2Q76L83 1435 aa27.96■■■□□ 2.07
CDR2-207ENST00000569045 FAM9AQ8IZU1 332 aaPredicted RBP27.94■■■□□ 2.06
CDR2-207ENST00000569045 CSRNP3Q8WYN3 585 aa27.94■■■□□ 2.06
CDR2-207ENST00000569045 TSPOAP1O95153 1857 aa27.91■■■□□ 2.06
CDR2-207ENST00000569045 KDM5BQ9UGL1 1544 aa27.9■■■□□ 2.06
CDR2-207ENST00000569045 EEA1Q15075 1411 aa27.89■■■□□ 2.06
CDR2-207ENST00000569045 GLI2P10070 1586 aa27.85■■■□□ 2.05
CDR2-207ENST00000569045 KDM6BO15054 1643 aa27.84■■■□□ 2.05
CDR2-207ENST00000569045 ZCCHC11Q5TAX3 1644 aaKnown RBP27.84■■■□□ 2.05
CDR2-207ENST00000569045 EPRSP07814 1512 aaKnown RBP27.77■■■□□ 2.04
CDR2-207ENST00000569045 ABCA8O94911 1581 aa27.74■■■□□ 2.03
CDR2-207ENST00000569045 WDR7Q9Y4E6 1490 aa27.73■■■□□ 2.03
CDR2-207ENST00000569045 P3H3Q8IVL6 736 aa27.73■■■□□ 2.03
CDR2-207ENST00000569045 TEX14Q8IWB6 1497 aa27.69■■■□□ 2.02
CDR2-207ENST00000569045 MAP3K4Q9Y6R4 1608 aa27.68■■■□□ 2.02
CDR2-207ENST00000569045 PPRC1Q5VV67 1664 aaKnown RBP27.67■■■□□ 2.02
CDR2-207ENST00000569045 SAMD9Q5K651 1589 aa27.64■■■□□ 2.01
CDR2-207ENST00000569045 KCNH8Q96L42 1107 aa27.63■■■□□ 2.01
CDR2-207ENST00000569045 RANGAP1P46060 587 aaPredicted RBP27.61■■■□□ 2.01
CDR2-207ENST00000569045 KIF21BO75037 1637 aa27.58■■■□□ 2.01
CDR2-207ENST00000569045 ARID3CA6NKF2 412 aa27.57■■■□□ 2
CDR2-207ENST00000569045 CD109Q6YHK3 1445 aa27.56■■■□□ 2
CDR2-207ENST00000569045 CHIC1Q5VXU3 224 aa27.55■■■□□ 2
CDR2-207ENST00000569045 CFAP43Q8NDM7 1665 aa27.55■■■□□ 2
CDR2-207ENST00000569045 ATP10BO94823 1461 aa27.53■■■□□ 2
CDR2-207ENST00000569045 RAPGEF6Q8TEU7 1601 aa27.52■■■□□ 2
CDR2-207ENST00000569045 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.51■■□□□ 1.99
CDR2-207ENST00000569045 HNRNPUL2Q1KMD3 747 aaKnown RBP27.51■■□□□ 1.99
CDR2-207ENST00000569045 MAGI3Q5TCQ9 1506 aa27.51■■□□□ 1.99
CDR2-207ENST00000569045 FHOD3Q2V2M9 1422 aa27.48■■□□□ 1.99
CDR2-207ENST00000569045 EFCAB5A4FU69 1503 aa27.47■■□□□ 1.99
CDR2-207ENST00000569045 UBTFP17480 764 aaKnown RBP27.47■■□□□ 1.99
CDR2-207ENST00000569045 COL17A1Q9UMD9 1497 aaPredicted RBP27.46■■□□□ 1.99
CDR2-207ENST00000569045 KDM4FA0A1W2PPD8 638 aa27.41■■□□□ 1.98
CDR2-207ENST00000569045 EHMT2Q96KQ7 1210 aa27.41■■□□□ 1.98
CDR2-207ENST00000569045 NUP153P49790 1475 aaKnown RBP27.39■■□□□ 1.98
CDR2-207ENST00000569045 ABCA9Q8IUA7 1624 aa27.35■■□□□ 1.97
CDR2-207ENST00000569045 PLEKHD1A6NEE1 506 aa27.35■■□□□ 1.97
CDR2-207ENST00000569045 PHLDB1Q86UU1 1377 aa27.33■■□□□ 1.97
CDR2-207ENST00000569045 ADGRL1O94910 1474 aa27.29■■□□□ 1.96
CDR2-207ENST00000569045 ARAP3Q8WWN8 1544 aa27.28■■□□□ 1.96
CDR2-207ENST00000569045 FMN1Q68DA7 1419 aa27.25■■□□□ 1.95
CDR2-207ENST00000569045 NEO1Q92859 1461 aa27.24■■□□□ 1.95
CDR2-207ENST00000569045 ATP1B4Q9UN42 357 aaPredicted RBP27.23■■□□□ 1.95
CDR2-207ENST00000569045 ARHGAP35Q9NRY4 1499 aa27.19■■□□□ 1.94
CDR2-207ENST00000569045 CDK11AQ9UQ88 783 aaPredicted RBP27.16■■□□□ 1.94
CDR2-207ENST00000569045 HECW1Q76N89 1606 aa27.16■■□□□ 1.94
CDR2-207ENST00000569045 CDK13Q14004 1512 aaKnown RBP27.15■■□□□ 1.94
CDR2-207ENST00000569045 RAPGEF3O95398 923 aa27.13■■□□□ 1.93
CDR2-207ENST00000569045 CFAP74Q9C0B2 1584 aa27.11■■□□□ 1.93
CDR2-207ENST00000569045 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.11■■□□□ 1.93
CDR2-207ENST00000569045 FANCAO15360 1455 aa27.08■■□□□ 1.93
CDR2-207ENST00000569045 AKNAQ7Z591 1439 aa27.07■■□□□ 1.92
CDR2-207ENST00000569045 DENND4BO75064 1496 aaPredicted RBP27.06■■□□□ 1.92
CDR2-207ENST00000569045 TTC37Q6PGP7 1564 aa27.05■■□□□ 1.92
CDR2-207ENST00000569045 CLIP1P30622 1438 aa26.99■■□□□ 1.91
CDR2-207ENST00000569045 FRMPD1Q5SYB0 1578 aa26.99■■□□□ 1.91
CDR2-207ENST00000569045 PLCH2O75038 1416 aa26.99■■□□□ 1.91
CDR2-207ENST00000569045 ARID4BQ4LE39 1312 aaPredicted RBP26.97■■□□□ 1.91
CDR2-207ENST00000569045 KIF14Q15058 1648 aa26.96■■□□□ 1.91
CDR2-207ENST00000569045 TROQ12816 1431 aaPredicted RBP26.96■■□□□ 1.91
CDR2-207ENST00000569045 EFCAB2Q5VUJ9 269 aa26.95■■□□□ 1.9
CDR2-207ENST00000569045 RICTORQ6R327 1708 aa26.95■■□□□ 1.9
CDR2-207ENST00000569045 CASKIN1Q8WXD9 1431 aa26.94■■□□□ 1.9
CDR2-207ENST00000569045 MYO5CQ9NQX4 1742 aa26.93■■□□□ 1.9
CDR2-207ENST00000569045 CCDC18Q5T9S5 1454 aa26.93■■□□□ 1.9
CDR2-207ENST00000569045 ARHGEF40Q8TER5 1519 aa26.9■■□□□ 1.9
CDR2-207ENST00000569045 SCAPERQ9BY12 1400 aa26.9■■□□□ 1.9
CDR2-207ENST00000569045 PCF11O94913 1555 aaKnown RBP26.88■■□□□ 1.89
CDR2-207ENST00000569045 ZMYM4Q5VZL5 1548 aa26.88■■□□□ 1.89
CDR2-207ENST00000569045 MAGI2Q86UL8 1455 aa26.87■■□□□ 1.89
CDR2-207ENST00000569045 LRRIQ1Q96JM4 1722 aa26.87■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms