RNA–Protein interactions for RNA: ENST00000568626.1

FANCA-231, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-231ENST00000568626 RIMBP3CA6NJZ7 1639 aa19.69■□□□□ 0.74
FANCA-231ENST00000568626 RIMBP3BA6NNM3 1639 aa19.69■□□□□ 0.74
FANCA-231ENST00000568626 RIMBP3Q9UFD9 1639 aa19.69■□□□□ 0.74
FANCA-231ENST00000568626 CTTNBP2Q8WZ74 1663 aa19.68■□□□□ 0.74
FANCA-231ENST00000568626 KIAA0586Q9BVV6 1533 aa19.66■□□□□ 0.74
FANCA-231ENST00000568626 IQGAP2Q13576 1575 aa19.63■□□□□ 0.73
FANCA-231ENST00000568626 SHROOM2Q13796 1616 aa19.59■□□□□ 0.73
FANCA-231ENST00000568626 ARHGEF11O15085 1522 aa19.58■□□□□ 0.73
FANCA-231ENST00000568626 UBTFP17480 764 aaKnown RBP19.54■□□□□ 0.72
FANCA-231ENST00000568626 UGGT2Q9NYU1 1516 aa19.53■□□□□ 0.72
FANCA-231ENST00000568626 TNIKQ9UKE5 1360 aa19.51■□□□□ 0.71
FANCA-231ENST00000568626 CYB5RLQ6IPT4 315 aa19.49■□□□□ 0.71
FANCA-231ENST00000568626 JPH4Q96JJ6 628 aa19.48■□□□□ 0.71
FANCA-231ENST00000568626 EHMT2Q96KQ7 1210 aa19.48■□□□□ 0.71
FANCA-231ENST00000568626 EFCAB5A4FU69 1503 aa19.46■□□□□ 0.71
FANCA-231ENST00000568626 CARMIL2Q6F5E8 1435 aa19.45■□□□□ 0.7
FANCA-231ENST00000568626 PRG4Q92954 1404 aaPredicted RBP19.45■□□□□ 0.7
FANCA-231ENST00000568626 SAMD9Q5K651 1589 aa19.44■□□□□ 0.7
FANCA-231ENST00000568626 KIAA0556O60303 1618 aa19.43■□□□□ 0.7
FANCA-231ENST00000568626 DISP1Q96F81 1524 aa19.41■□□□□ 0.7
FANCA-231ENST00000568626 ARAP1Q96P48 1450 aa19.39■□□□□ 0.69
FANCA-231ENST00000568626 ERCC6L2Q5T890 1561 aa19.39■□□□□ 0.69
FANCA-231ENST00000568626 LOC105371045A0A1W2PR82 267 aa19.38■□□□□ 0.69
FANCA-231ENST00000568626 CLIP1P30622 1438 aa19.34■□□□□ 0.69
FANCA-231ENST00000568626 CEP162Q5TB80 1403 aa19.34■□□□□ 0.69
FANCA-231ENST00000568626 ARHGAP35Q9NRY4 1499 aa19.33■□□□□ 0.68
FANCA-231ENST00000568626 TRHP20396 242 aaPredicted RBP19.29■□□□□ 0.68
FANCA-231ENST00000568626 RANGAP1P46060 587 aaPredicted RBP19.29■□□□□ 0.68
FANCA-231ENST00000568626 FHOD3Q2V2M9 1422 aa19.27■□□□□ 0.68
FANCA-231ENST00000568626 PTPRGP23470 1445 aa19.26■□□□□ 0.67
FANCA-231ENST00000568626 FMN1Q68DA7 1419 aa19.24■□□□□ 0.67
FANCA-231ENST00000568626 P3H3Q8IVL6 736 aa19.21■□□□□ 0.67
FANCA-231ENST00000568626 ABCA8O94911 1581 aa19.19■□□□□ 0.66
FANCA-231ENST00000568626 ABCC2Q92887 1545 aa19.18■□□□□ 0.66
FANCA-231ENST00000568626 UACAQ9BZF9 1416 aa19.17■□□□□ 0.66
FANCA-231ENST00000568626 UHRF1BP1LA0JNW5 1464 aa19.17■□□□□ 0.66
FANCA-231ENST00000568626 RAPGEF6Q8TEU7 1601 aa19.17■□□□□ 0.66
FANCA-231ENST00000568626 PLB1Q6P1J6 1458 aa19.15■□□□□ 0.66
FANCA-231ENST00000568626 TTBK1Q5TCY1 1321 aaPredicted RBP19.14■□□□□ 0.65
FANCA-231ENST00000568626 ADCY10Q96PN6 1610 aa19.14■□□□□ 0.65
FANCA-231ENST00000568626 HECW1Q76N89 1606 aa19.13■□□□□ 0.65
FANCA-231ENST00000568626 PCF11O94913 1555 aaKnown RBP19.11■□□□□ 0.65
FANCA-231ENST00000568626 FYCO1Q9BQS8 1478 aa19.11■□□□□ 0.65
FANCA-231ENST00000568626 VPS8Q8N3P4 1428 aa19.11■□□□□ 0.65
FANCA-231ENST00000568626 CASKIN1Q8WXD9 1431 aa19.11■□□□□ 0.65
FANCA-231ENST00000568626 NUP153P49790 1475 aaKnown RBP19.07■□□□□ 0.64
FANCA-231ENST00000568626 KDM5BQ9UGL1 1544 aa19.06■□□□□ 0.64
FANCA-231ENST00000568626 CCDC18Q5T9S5 1454 aa19.03■□□□□ 0.64
FANCA-231ENST00000568626 ZCCHC11Q5TAX3 1644 aaKnown RBP19.03■□□□□ 0.64
FANCA-231ENST00000568626 EPRSP07814 1512 aaKnown RBP19.01■□□□□ 0.63
FANCA-231ENST00000568626 NPM1P06748 294 aaKnown RBP eCLIP19■□□□□ 0.63
FANCA-231ENST00000568626 MAPKBP1O60336 1514 aa18.99■□□□□ 0.63
FANCA-231ENST00000568626 ATP10BO94823 1461 aa18.98■□□□□ 0.63
FANCA-231ENST00000568626 LRRIQ1Q96JM4 1722 aa18.97■□□□□ 0.63
FANCA-231ENST00000568626 CFAP43Q8NDM7 1665 aa18.95■□□□□ 0.62
FANCA-231ENST00000568626 CDK13Q14004 1512 aaKnown RBP18.95■□□□□ 0.62
FANCA-231ENST00000568626 ATP1B4Q9UN42 357 aaPredicted RBP18.95■□□□□ 0.62
FANCA-231ENST00000568626 MAP3K1Q13233 1512 aa18.94■□□□□ 0.62
FANCA-231ENST00000568626 TIAM1Q13009 1591 aa18.92■□□□□ 0.62
FANCA-231ENST00000568626 WDR7Q9Y4E6 1490 aa18.9■□□□□ 0.62
FANCA-231ENST00000568626 CDK11AQ9UQ88 783 aaPredicted RBP18.9■□□□□ 0.62
FANCA-231ENST00000568626 ASXL2Q76L83 1435 aa18.9■□□□□ 0.62
FANCA-231ENST00000568626 ARID3CA6NKF2 412 aa18.89■□□□□ 0.61
FANCA-231ENST00000568626 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.89■□□□□ 0.61
FANCA-231ENST00000568626 HNRNPUL2Q1KMD3 747 aaKnown RBP18.89■□□□□ 0.61
FANCA-231ENST00000568626 APLP2Q06481 763 aa18.86■□□□□ 0.61
FANCA-231ENST00000568626 EHBP1L1Q8N3D4 1523 aa18.85■□□□□ 0.61
FANCA-231ENST00000568626 TROQ12816 1431 aaPredicted RBP18.84■□□□□ 0.61
FANCA-231ENST00000568626 PLEKHD1A6NEE1 506 aa18.84■□□□□ 0.61
FANCA-231ENST00000568626 KIF14Q15058 1648 aa18.82■□□□□ 0.6
FANCA-231ENST00000568626 KIF13AQ9H1H9 1805 aa18.82■□□□□ 0.6
FANCA-231ENST00000568626 DIP2BQ9P265 1576 aa18.81■□□□□ 0.6
FANCA-231ENST00000568626 MAGI3Q5TCQ9 1506 aa18.81■□□□□ 0.6
FANCA-231ENST00000568626 ABCC10Q5T3U5 1492 aa18.81■□□□□ 0.6
FANCA-231ENST00000568626 MTUS2Q5JR59 1369 aa18.81■□□□□ 0.6
FANCA-231ENST00000568626 LRRC9Q6ZRR7 1453 aa18.8■□□□□ 0.6
FANCA-231ENST00000568626 GLI2P10070 1586 aa18.8■□□□□ 0.6
FANCA-231ENST00000568626 AEBP2Q6ZN18 517 aaPredicted RBP18.77■□□□□ 0.6
FANCA-231ENST00000568626 ABCA9Q8IUA7 1624 aa18.76■□□□□ 0.59
FANCA-231ENST00000568626 SUPT6HQ7KZ85 1726 aaKnown RBP18.76■□□□□ 0.59
FANCA-231ENST00000568626 MAP3K4Q9Y6R4 1608 aa18.72■□□□□ 0.59
FANCA-231ENST00000568626 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.72■□□□□ 0.59
FANCA-231ENST00000568626 TTC37Q6PGP7 1564 aa18.72■□□□□ 0.59
FANCA-231ENST00000568626 KCNH8Q96L42 1107 aa18.7■□□□□ 0.58
FANCA-231ENST00000568626 MYO5CQ9NQX4 1742 aa18.69■□□□□ 0.58
FANCA-231ENST00000568626 FAM69CQ0P6D2 419 aa18.68■□□□□ 0.58
FANCA-231ENST00000568626 KANK4Q5T7N3 995 aaPredicted RBP18.68■□□□□ 0.58
FANCA-231ENST00000568626 NCOA2Q15596 1464 aa18.68■□□□□ 0.58
FANCA-231ENST00000568626 ARAP3Q8WWN8 1544 aa18.68■□□□□ 0.58
FANCA-231ENST00000568626 ITSN2Q9NZM3 1697 aa18.67■□□□□ 0.58
FANCA-231ENST00000568626 PREX2Q70Z35 1606 aa18.66■□□□□ 0.58
FANCA-231ENST00000568626 CD109Q6YHK3 1445 aa18.65■□□□□ 0.58
FANCA-231ENST00000568626 CDC42BPAQ5VT25 1732 aa18.63■□□□□ 0.57
FANCA-231ENST00000568626 CCNB3Q8WWL7 1395 aa18.63■□□□□ 0.57
FANCA-231ENST00000568626 TEX14Q8IWB6 1497 aa18.63■□□□□ 0.57
FANCA-231ENST00000568626 CFAP74Q9C0B2 1584 aa18.63■□□□□ 0.57
FANCA-231ENST00000568626 TSPOAP1O95153 1857 aa18.62■□□□□ 0.57
FANCA-231ENST00000568626 PLCH2O75038 1416 aa18.61■□□□□ 0.57
FANCA-231ENST00000568626 PPRC1Q5VV67 1664 aaKnown RBP18.6■□□□□ 0.57
FANCA-231ENST00000568626 GPATCH8Q9UKJ3 1502 aaKnown RBP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms