RNA–Protein interactions for RNA: ENST00000568508.5

EPB42-207, Transcript of erythrocyte membrane protein band 4.2, humanhuman

TSL 5

Gene EPB42, Length 1,813 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB42-207ENST00000568508 CEP170Q5SW79 1584 aa24.42■■□□□ 1.5
EPB42-207ENST00000568508 CEP162Q5TB80 1403 aa24.4■■□□□ 1.5
EPB42-207ENST00000568508 CTTNBP2Q8WZ74 1663 aa24.39■■□□□ 1.5
EPB42-207ENST00000568508 KIAA0586Q9BVV6 1533 aa24.38■■□□□ 1.49
EPB42-207ENST00000568508 CLIP1P30622 1438 aa24.32■■□□□ 1.48
EPB42-207ENST00000568508 IQGAP2Q13576 1575 aa24.31■■□□□ 1.48
EPB42-207ENST00000568508 RANGAP1P46060 587 aaPredicted RBP24.27■■□□□ 1.48
EPB42-207ENST00000568508 ARHGAP35Q9NRY4 1499 aa24.26■■□□□ 1.47
EPB42-207ENST00000568508 UGGT2Q9NYU1 1516 aa24.25■■□□□ 1.47
EPB42-207ENST00000568508 CLASP1Q7Z460 1538 aa24.22■■□□□ 1.47
EPB42-207ENST00000568508 JPH4Q96JJ6 628 aa24.22■■□□□ 1.47
EPB42-207ENST00000568508 SAMD9Q5K651 1589 aa24.19■■□□□ 1.46
EPB42-207ENST00000568508 OSCARQ8IYS5 282 aa24.19■■□□□ 1.46
EPB42-207ENST00000568508 ARAP1Q96P48 1450 aa24.19■■□□□ 1.46
EPB42-207ENST00000568508 EFCAB5A4FU69 1503 aa24.18■■□□□ 1.46
EPB42-207ENST00000568508 DISP1Q96F81 1524 aa24.16■■□□□ 1.46
EPB42-207ENST00000568508 SHROOM2Q13796 1616 aa24.15■■□□□ 1.46
EPB42-207ENST00000568508 P3H3Q8IVL6 736 aa24.12■■□□□ 1.45
EPB42-207ENST00000568508 FHOD3Q2V2M9 1422 aa24.09■■□□□ 1.45
EPB42-207ENST00000568508 KIAA0556O60303 1618 aa24.08■■□□□ 1.44
EPB42-207ENST00000568508 PRG4Q92954 1404 aaPredicted RBP24.07■■□□□ 1.44
EPB42-207ENST00000568508 VPS8Q8N3P4 1428 aa24.05■■□□□ 1.44
EPB42-207ENST00000568508 CARMIL2Q6F5E8 1435 aa24.03■■□□□ 1.44
EPB42-207ENST00000568508 ERCC6L2Q5T890 1561 aa24.01■■□□□ 1.43
EPB42-207ENST00000568508 FMN1Q68DA7 1419 aa23.96■■□□□ 1.43
EPB42-207ENST00000568508 CASKIN1Q8WXD9 1431 aa23.89■■□□□ 1.42
EPB42-207ENST00000568508 PTPRGP23470 1445 aa23.87■■□□□ 1.41
EPB42-207ENST00000568508 PCF11O94913 1555 aaKnown RBP23.87■■□□□ 1.41
EPB42-207ENST00000568508 FYCO1Q9BQS8 1478 aa23.84■■□□□ 1.41
EPB42-207ENST00000568508 TTBK1Q5TCY1 1321 aaPredicted RBP23.83■■□□□ 1.4
EPB42-207ENST00000568508 PLB1Q6P1J6 1458 aa23.82■■□□□ 1.4
EPB42-207ENST00000568508 ABCA8O94911 1581 aa23.8■■□□□ 1.4
EPB42-207ENST00000568508 ARHGEF11O15085 1522 aa23.78■■□□□ 1.4
EPB42-207ENST00000568508 RAPGEF6Q8TEU7 1601 aa23.77■■□□□ 1.4
EPB42-207ENST00000568508 MAP3K1Q13233 1512 aa23.76■■□□□ 1.39
EPB42-207ENST00000568508 NUP153P49790 1475 aaKnown RBP23.76■■□□□ 1.39
EPB42-207ENST00000568508 LRRIQ1Q96JM4 1722 aa23.75■■□□□ 1.39
EPB42-207ENST00000568508 UACAQ9BZF9 1416 aa23.74■■□□□ 1.39
EPB42-207ENST00000568508 HECW1Q76N89 1606 aa23.72■■□□□ 1.39
EPB42-207ENST00000568508 ATP1B4Q9UN42 357 aaPredicted RBP23.72■■□□□ 1.39
EPB42-207ENST00000568508 EPRSP07814 1512 aaKnown RBP23.7■■□□□ 1.38
EPB42-207ENST00000568508 TIAM1Q13009 1591 aa23.7■■□□□ 1.38
EPB42-207ENST00000568508 KANK4Q5T7N3 995 aaPredicted RBP23.69■■□□□ 1.38
EPB42-207ENST00000568508 RIMBP3CA6NJZ7 1639 aa23.69■■□□□ 1.38
EPB42-207ENST00000568508 RIMBP3BA6NNM3 1639 aa23.69■■□□□ 1.38
EPB42-207ENST00000568508 RIMBP3Q9UFD9 1639 aa23.69■■□□□ 1.38
EPB42-207ENST00000568508 UHRF1BP1LA0JNW5 1464 aa23.69■■□□□ 1.38
EPB42-207ENST00000568508 APLP2Q06481 763 aa23.68■■□□□ 1.38
EPB42-207ENST00000568508 ABCC2Q92887 1545 aa23.67■■□□□ 1.38
EPB42-207ENST00000568508 PPARGC1BQ86YN6 1023 aaKnown RBP23.66■■□□□ 1.38
EPB42-207ENST00000568508 CCDC18Q5T9S5 1454 aa23.65■■□□□ 1.38
EPB42-207ENST00000568508 CFAP43Q8NDM7 1665 aa23.65■■□□□ 1.38
EPB42-207ENST00000568508 ATP10BO94823 1461 aa23.65■■□□□ 1.38
EPB42-207ENST00000568508 CDK13Q14004 1512 aaKnown RBP23.64■■□□□ 1.38
EPB42-207ENST00000568508 LRRC9Q6ZRR7 1453 aa23.61■■□□□ 1.37
EPB42-207ENST00000568508 ARID3CA6NKF2 412 aa23.61■■□□□ 1.37
EPB42-207ENST00000568508 ADCY10Q96PN6 1610 aa23.6■■□□□ 1.37
EPB42-207ENST00000568508 MAGI3Q5TCQ9 1506 aa23.59■■□□□ 1.37
EPB42-207ENST00000568508 KDM5BQ9UGL1 1544 aa23.59■■□□□ 1.37
EPB42-207ENST00000568508 CYB5RLQ6IPT4 315 aa23.54■■□□□ 1.36
EPB42-207ENST00000568508 MTUS2Q5JR59 1369 aa23.5■■□□□ 1.35
EPB42-207ENST00000568508 ZCCHC11Q5TAX3 1644 aaKnown RBP23.49■■□□□ 1.35
EPB42-207ENST00000568508 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.49■■□□□ 1.35
EPB42-207ENST00000568508 HNRNPUL2Q1KMD3 747 aaKnown RBP23.49■■□□□ 1.35
EPB42-207ENST00000568508 CDK11AQ9UQ88 783 aaPredicted RBP23.48■■□□□ 1.35
EPB42-207ENST00000568508 DNAJC5Q9H3Z4 198 aa23.47■■□□□ 1.35
EPB42-207ENST00000568508 EHBP1L1Q8N3D4 1523 aa23.47■■□□□ 1.35
EPB42-207ENST00000568508 TROQ12816 1431 aaPredicted RBP23.47■■□□□ 1.35
EPB42-207ENST00000568508 PLEKHD1A6NEE1 506 aa23.45■■□□□ 1.34
EPB42-207ENST00000568508 PHLDB1Q86UU1 1377 aa23.39■■□□□ 1.34
EPB42-207ENST00000568508 NCOA2Q15596 1464 aa23.39■■□□□ 1.33
EPB42-207ENST00000568508 SUPT6HQ7KZ85 1726 aaKnown RBP23.37■■□□□ 1.33
EPB42-207ENST00000568508 NPM1P06748 294 aaKnown RBP eCLIP23.36■■□□□ 1.33
EPB42-207ENST00000568508 ASXL2Q76L83 1435 aa23.35■■□□□ 1.33
EPB42-207ENST00000568508 KIF14Q15058 1648 aa23.35■■□□□ 1.33
EPB42-207ENST00000568508 TRIM26Q12899 539 aaPredicted RBP23.33■■□□□ 1.33
EPB42-207ENST00000568508 ABCC10Q5T3U5 1492 aa23.32■■□□□ 1.32
EPB42-207ENST00000568508 WDR7Q9Y4E6 1490 aa23.32■■□□□ 1.32
EPB42-207ENST00000568508 RRBP1Q9P2E9 1410 aaKnown RBP23.29■■□□□ 1.32
EPB42-207ENST00000568508 MAPKBP1O60336 1514 aa23.29■■□□□ 1.32
EPB42-207ENST00000568508 MYOM3Q5VTT5 1437 aa23.27■■□□□ 1.32
EPB42-207ENST00000568508 KCNH8Q96L42 1107 aa23.27■■□□□ 1.32
EPB42-207ENST00000568508 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.26■■□□□ 1.31
EPB42-207ENST00000568508 GPATCH8Q9UKJ3 1502 aaKnown RBP23.25■■□□□ 1.31
EPB42-207ENST00000568508 CCNB3Q8WWL7 1395 aa23.23■■□□□ 1.31
EPB42-207ENST00000568508 FGD6Q6ZV73 1430 aa23.23■■□□□ 1.31
EPB42-207ENST00000568508 TTC37Q6PGP7 1564 aa23.21■■□□□ 1.31
EPB42-207ENST00000568508 MIA2Q96PC5 1412 aa23.2■■□□□ 1.31
EPB42-207ENST00000568508 CDC42BPAQ5VT25 1732 aa23.18■■□□□ 1.3
EPB42-207ENST00000568508 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.17■■□□□ 1.3
EPB42-207ENST00000568508 ABCA9Q8IUA7 1624 aa23.17■■□□□ 1.3
EPB42-207ENST00000568508 PCGF6Q9BYE7 350 aa23.16■■□□□ 1.3
EPB42-207ENST00000568508 TCOF1Q13428 1488 aaKnown RBP23.15■■□□□ 1.3
EPB42-207ENST00000568508 PLCH2O75038 1416 aa23.13■■□□□ 1.29
EPB42-207ENST00000568508 CFDP1Q9UEE9 299 aaPredicted RBP23.13■■□□□ 1.29
EPB42-207ENST00000568508 CDC42BPBQ9Y5S2 1711 aa23.13■■□□□ 1.29
EPB42-207ENST00000568508 ITSN2Q9NZM3 1697 aa23.13■■□□□ 1.29
EPB42-207ENST00000568508 PTPN23Q9H3S7 1636 aa23.12■■□□□ 1.29
EPB42-207ENST00000568508 PREX2Q70Z35 1606 aa23.12■■□□□ 1.29
EPB42-207ENST00000568508 ZNF644Q9H582 1327 aaPredicted RBP23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms