RNA–Protein interactions for RNA: ENST00000568294.5

HDGFL3-206, Transcript of HDGF like 3, humanhuman

TSL 4

Gene HDGFL3, Length 3,397 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-206ENST00000568294 PHLDB1Q86UU1 1377 aa12.72□□□□□ -0.37
HDGFL3-206ENST00000568294 CARMIL1Q5VZK9 1371 aa12.72□□□□□ -0.37
HDGFL3-206ENST00000568294 CLSPNQ9HAW4 1339 aa12.71□□□□□ -0.37
HDGFL3-206ENST00000568294 PEG3Q9GZU2 1588 aa12.71□□□□□ -0.38
HDGFL3-206ENST00000568294 ANP32CO43423 234 aa12.7□□□□□ -0.38
HDGFL3-206ENST00000568294 FHOD3Q2V2M9 1422 aa12.7□□□□□ -0.38
HDGFL3-206ENST00000568294 POLR3GLQ9BT43 218 aa12.69□□□□□ -0.38
HDGFL3-206ENST00000568294 IGF1RP08069 1367 aa12.68□□□□□ -0.38
HDGFL3-206ENST00000568294 RRBP1Q9P2E9 1410 aaKnown RBP12.68□□□□□ -0.38
HDGFL3-206ENST00000568294 SETD5Q9C0A6 1442 aa12.67□□□□□ -0.38
HDGFL3-206ENST00000568294 RRP7BPQ9NSQ0 103 aa12.67□□□□□ -0.38
HDGFL3-206ENST00000568294 MYT1Q01538 1121 aa12.66□□□□□ -0.38
HDGFL3-206ENST00000568294 TONSLQ96HA7 1378 aa12.65□□□□□ -0.38
HDGFL3-206ENST00000568294 ERICH3Q5RHP9 1530 aa12.64□□□□□ -0.39
HDGFL3-206ENST00000568294 HNRNPUQ00839 825 aaKnown RBP eCLIP12.63□□□□□ -0.39
HDGFL3-206ENST00000568294 FOXD1Q16676 465 aa12.63□□□□□ -0.39
HDGFL3-206ENST00000568294 WDR97A6NE52 1622 aa12.62□□□□□ -0.39
HDGFL3-206ENST00000568294 RAD54L2Q9Y4B4 1467 aa12.61□□□□□ -0.39
HDGFL3-206ENST00000568294 FGD5Q6ZNL6 1462 aa12.61□□□□□ -0.39
HDGFL3-206ENST00000568294 MTUS2Q5JR59 1369 aa12.6□□□□□ -0.39
HDGFL3-206ENST00000568294 MAPKBP1O60336 1514 aa12.59□□□□□ -0.39
HDGFL3-206ENST00000568294 BIVM-ERCC5R4GMW8 1640 aa12.58□□□□□ -0.4
HDGFL3-206ENST00000568294 PPP1R15AO75807 674 aaPredicted RBP12.58□□□□□ -0.4
HDGFL3-206ENST00000568294 ZNF326Q5BKZ1 582 aaKnown RBP12.58□□□□□ -0.4
HDGFL3-206ENST00000568294 CFTRP13569 1480 aa12.58□□□□□ -0.4
HDGFL3-206ENST00000568294 LRRC9Q6ZRR7 1453 aa12.58□□□□□ -0.4
HDGFL3-206ENST00000568294 NCAPD3P42695 1498 aa12.57□□□□□ -0.4
HDGFL3-206ENST00000568294 TDRD9Q8NDG6 1382 aaKnown RBP12.56□□□□□ -0.4
HDGFL3-206ENST00000568294 FAM9BQ8IZU0 186 aa12.56□□□□□ -0.4
HDGFL3-206ENST00000568294 CADPSQ9ULU8 1353 aa12.55□□□□□ -0.4
HDGFL3-206ENST00000568294 TIAM1Q13009 1591 aa12.53□□□□□ -0.4
HDGFL3-206ENST00000568294 ANP32EQ9BTT0 268 aa12.52□□□□□ -0.41
HDGFL3-206ENST00000568294 FHAD1B1AJZ9 1412 aa12.51□□□□□ -0.41
HDGFL3-206ENST00000568294 NESP48681 1621 aa12.51□□□□□ -0.41
HDGFL3-206ENST00000568294 DNAJC5BQ9UF47 199 aa12.51□□□□□ -0.41
HDGFL3-206ENST00000568294 RBM19Q9Y4C8 960 aaKnown RBP12.51□□□□□ -0.41
HDGFL3-206ENST00000568294 PCF11O94913 1555 aaKnown RBP12.49□□□□□ -0.41
HDGFL3-206ENST00000568294 HSPA5P11021 654 aaKnown RBP12.48□□□□□ -0.41
HDGFL3-206ENST00000568294 ERICH6Q7L0X2 663 aa12.48□□□□□ -0.41
HDGFL3-206ENST00000568294 CCDC184Q52MB2 194 aa12.48□□□□□ -0.41
HDGFL3-206ENST00000568294 FANCD2Q9BXW9 1451 aa12.47□□□□□ -0.41
HDGFL3-206ENST00000568294 ZNF777Q9ULD5 760 aaPredicted RBP12.46□□□□□ -0.41
HDGFL3-206ENST00000568294 HMGXB3Q12766 1538 aa12.46□□□□□ -0.42
HDGFL3-206ENST00000568294 CCDC18Q5T9S5 1454 aa12.45□□□□□ -0.42
HDGFL3-206ENST00000568294 PLPPR3Q6T4P5 718 aa12.44□□□□□ -0.42
HDGFL3-206ENST00000568294 PTPRKQ15262 1439 aa12.44□□□□□ -0.42
HDGFL3-206ENST00000568294 MRS2Q9HD23 443 aa12.43□□□□□ -0.42
HDGFL3-206ENST00000568294 FGD6Q6ZV73 1430 aa12.43□□□□□ -0.42
HDGFL3-206ENST00000568294 B4GALNT3Q6L9W6 998 aa12.43□□□□□ -0.42
HDGFL3-206ENST00000568294 CCER2I3L3R5 266 aa12.41□□□□□ -0.42
HDGFL3-206ENST00000568294 SALL2Q9Y467 1007 aaPredicted RBP12.41□□□□□ -0.42
HDGFL3-206ENST00000568294 FBLN2P98095 1184 aa12.4□□□□□ -0.42
HDGFL3-206ENST00000568294 CDK11AQ9UQ88 783 aaPredicted RBP12.4□□□□□ -0.42
HDGFL3-206ENST00000568294 AQRO60306 1485 aaKnown RBP eCLIP12.4□□□□□ -0.42
HDGFL3-206ENST00000568294 EIF4G2P78344 907 aaKnown RBP eCLIP12.4□□□□□ -0.42
HDGFL3-206ENST00000568294 L3MBTL2Q969R5 705 aa12.4□□□□□ -0.42
HDGFL3-206ENST00000568294 WASHC2AQ641Q2 1341 aa12.4□□□□□ -0.43
HDGFL3-206ENST00000568294 POLA1P09884 1462 aaPredicted RBP12.39□□□□□ -0.43
HDGFL3-206ENST00000568294 C11orf95C9JLR9 678 aaPredicted RBP12.38□□□□□ -0.43
HDGFL3-206ENST00000568294 ZNF644Q9H582 1327 aaPredicted RBP12.37□□□□□ -0.43
HDGFL3-206ENST00000568294 SLC4A1APQ9BWU0 796 aaKnown RBP12.36□□□□□ -0.43
HDGFL3-206ENST00000568294 MPHOSPH9Q99550 1183 aa12.36□□□□□ -0.43
HDGFL3-206ENST00000568294 CASKIN1Q8WXD9 1431 aa12.35□□□□□ -0.43
HDGFL3-206ENST00000568294 FMN1Q68DA7 1419 aa12.35□□□□□ -0.43
HDGFL3-206ENST00000568294 NCOA2Q15596 1464 aa12.35□□□□□ -0.43
HDGFL3-206ENST00000568294 TIMELESSQ9UNS1 1208 aa12.34□□□□□ -0.43
HDGFL3-206ENST00000568294 KDM2AQ9Y2K7 1162 aa12.33□□□□□ -0.43
HDGFL3-206ENST00000568294 MSH5O43196 834 aa12.33□□□□□ -0.44
HDGFL3-206ENST00000568294 TOPBP1Q92547 1522 aa12.33□□□□□ -0.44
HDGFL3-206ENST00000568294 FYCO1Q9BQS8 1478 aa12.32□□□□□ -0.44
HDGFL3-206ENST00000568294 NAIPQ13075 1403 aa12.32□□□□□ -0.44
HDGFL3-206ENST00000568294 UACAQ9BZF9 1416 aa12.32□□□□□ -0.44
HDGFL3-206ENST00000568294 CC2D2AQ9P2K1 1620 aa12.32□□□□□ -0.44
HDGFL3-206ENST00000568294 NBPF8Q3BBV2 869 aa12.31□□□□□ -0.44
HDGFL3-206ENST00000568294 NBR1Q14596 966 aa12.3□□□□□ -0.44
HDGFL3-206ENST00000568294 MYOM3Q5VTT5 1437 aa12.3□□□□□ -0.44
HDGFL3-206ENST00000568294 AEBP2Q6ZN18 517 aaPredicted RBP12.29□□□□□ -0.44
HDGFL3-206ENST00000568294 BCL11AQ9H165 835 aa12.29□□□□□ -0.44
HDGFL3-206ENST00000568294 HFM1A2PYH4 1435 aa12.29□□□□□ -0.44
HDGFL3-206ENST00000568294 PRKRIP1Q9H875 184 aaPredicted RBP12.27□□□□□ -0.45
HDGFL3-206ENST00000568294 MAP3K1Q13233 1512 aa12.27□□□□□ -0.45
HDGFL3-206ENST00000568294 GAPVD1Q14C86 1478 aa12.26□□□□□ -0.45
HDGFL3-206ENST00000568294 CDK13Q14004 1512 aaKnown RBP12.25□□□□□ -0.45
HDGFL3-206ENST00000568294 ABCA10Q8WWZ4 1543 aa12.25□□□□□ -0.45
HDGFL3-206ENST00000568294 PTPN23Q9H3S7 1636 aa12.24□□□□□ -0.45
HDGFL3-206ENST00000568294 CFAP43Q8NDM7 1665 aa12.24□□□□□ -0.45
HDGFL3-206ENST00000568294 NPM2Q86SE8 214 aaKnown RBP12.24□□□□□ -0.45
HDGFL3-206ENST00000568294 PDS5BQ9NTI5 1447 aa12.24□□□□□ -0.45
HDGFL3-206ENST00000568294 URB2Q14146 1524 aaKnown RBP12.23□□□□□ -0.45
HDGFL3-206ENST00000568294 SNAPC4Q5SXM2 1469 aa12.23□□□□□ -0.45
HDGFL3-206ENST00000568294 KIF7Q2M1P5 1343 aa12.23□□□□□ -0.45
HDGFL3-206ENST00000568294 DNMBPQ6XZF7 1577 aa12.22□□□□□ -0.45
HDGFL3-206ENST00000568294 PPP4R2Q9NY27 417 aa12.22□□□□□ -0.45
HDGFL3-206ENST00000568294 CFDP1Q9UEE9 299 aaPredicted RBP12.21□□□□□ -0.45
HDGFL3-206ENST00000568294 CCDC7Q96M83 1385 aa12.2□□□□□ -0.46
HDGFL3-206ENST00000568294 CCDC136Q96JN2 1154 aa12.2□□□□□ -0.46
HDGFL3-206ENST00000568294 EFCAB5A4FU69 1503 aa12.2□□□□□ -0.46
HDGFL3-206ENST00000568294 PKD2Q13563 968 aa12.2□□□□□ -0.46
HDGFL3-206ENST00000568294 RGL3Q3MIN7 710 aa12.2□□□□□ -0.46
HDGFL3-206ENST00000568294 TMC1Q8TDI8 760 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms