RNA–Protein interactions for RNA: ENST00000568265.1

TAF1C-219, Transcript of TATA-box binding protein associated factor, RNA polymerase I subunit C, human

APPRIS ALT2 TSL 4

Gene TAF1C, Length 1,140 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TAF1C-219	ENST00000568265	KIAA0586	Q9BVV6	1533 aa		33.89	■■■■□ 3.02
TAF1C-219	ENST00000568265	PRG4	Q92954	1404 aa	Predicted RBP	33.83	■■■■□ 3.01
TAF1C-219	ENST00000568265	JPH4	Q96JJ6	628 aa		33.78	■■■■□ 3
TAF1C-219	ENST00000568265	RAPGEF2	Q9Y4G8	1499 aa		33.75	■■■□□ 2.99
TAF1C-219	ENST00000568265	IQGAP2	Q13576	1575 aa		33.7	■■■□□ 2.99
TAF1C-219	ENST00000568265	PRX	Q9BXM0	1461 aa		33.62	■■■□□ 2.97
TAF1C-219	ENST00000568265	CTTNBP2	Q8WZ74	1663 aa		33.58	■■■□□ 2.97
TAF1C-219	ENST00000568265	UGGT2	Q9NYU1	1516 aa		33.52	■■■□□ 2.96
TAF1C-219	ENST00000568265	EEA1	Q15075	1411 aa		33.48	■■■□□ 2.95
TAF1C-219	ENST00000568265	ADCY10	Q96PN6	1610 aa		33.48	■■■□□ 2.95
TAF1C-219	ENST00000568265	DISP1	Q96F81	1524 aa		33.48	■■■□□ 2.95
TAF1C-219	ENST00000568265	CARMIL2	Q6F5E8	1435 aa		33.47	■■■□□ 2.95
TAF1C-219	ENST00000568265	TRH	P20396	242 aa	Predicted RBP	33.41	■■■□□ 2.94
TAF1C-219	ENST00000568265	KIAA0556	O60303	1618 aa		33.41	■■■□□ 2.94
TAF1C-219	ENST00000568265	TNIK	Q9UKE5	1360 aa		33.4	■■■□□ 2.94
TAF1C-219	ENST00000568265	PTPRG	P23470	1445 aa		33.36	■■■□□ 2.93
TAF1C-219	ENST00000568265	MAPKBP1	O60336	1514 aa		33.34	■■■□□ 2.93
TAF1C-219	ENST00000568265	CSRNP3	Q8WYN3	585 aa		33.33	■■■□□ 2.93
TAF1C-219	ENST00000568265	KIF13A	Q9H1H9	1805 aa		33.29	■■■□□ 2.92
TAF1C-219	ENST00000568265	CHIC1	Q5VXU3	224 aa		33.28	■■■□□ 2.92
TAF1C-219	ENST00000568265	UHRF1BP1L	A0JNW5	1464 aa		33.25	■■■□□ 2.91
TAF1C-219	ENST00000568265	GOLGA3	Q08378	1498 aa		33.25	■■■□□ 2.91
TAF1C-219	ENST00000568265	KIF21B	O75037	1637 aa		33.24	■■■□□ 2.91
TAF1C-219	ENST00000568265	ABCC2	Q92887	1545 aa		33.21	■■■□□ 2.91
TAF1C-219	ENST00000568265	UACA	Q9BZF9	1416 aa		33.19	■■■□□ 2.9
TAF1C-219	ENST00000568265	DIP2B	Q9P265	1576 aa		33.17	■■■□□ 2.9
TAF1C-219	ENST00000568265	ABCC10	Q5T3U5	1492 aa		33.16	■■■□□ 2.9
TAF1C-219	ENST00000568265	SAMD9	Q5K651	1589 aa		33.13	■■■□□ 2.89
TAF1C-219	ENST00000568265	NPM1	P06748	294 aa	Known RBP eCLIP	33.13	■■■□□ 2.89
TAF1C-219	ENST00000568265	KDM5B	Q9UGL1	1544 aa		33.08	■■■□□ 2.89
TAF1C-219	ENST00000568265	TTBK1	Q5TCY1	1321 aa	Predicted RBP	33.08	■■■□□ 2.89
TAF1C-219	ENST00000568265	ABCA8	O94911	1581 aa		33.05	■■■□□ 2.88
TAF1C-219	ENST00000568265	FAM9A	Q8IZU1	332 aa	Predicted RBP	33.04	■■■□□ 2.88
TAF1C-219	ENST00000568265	ZCCHC11	Q5TAX3	1644 aa	Known RBP	33.03	■■■□□ 2.88
TAF1C-219	ENST00000568265	PLB1	Q6P1J6	1458 aa		33	■■■□□ 2.87
TAF1C-219	ENST00000568265	ASXL2	Q76L83	1435 aa		32.97	■■■□□ 2.87
TAF1C-219	ENST00000568265	GLI2	P10070	1586 aa		32.92	■■■□□ 2.86
TAF1C-219	ENST00000568265	FAM69C	Q0P6D2	419 aa		32.92	■■■□□ 2.86
TAF1C-219	ENST00000568265	EFCAB5	A4FU69	1503 aa		32.9	■■■□□ 2.86
TAF1C-219	ENST00000568265	EPRS	P07814	1512 aa	Known RBP	32.82	■■■□□ 2.85
TAF1C-219	ENST00000568265	RAPGEF6	Q8TEU7	1601 aa		32.81	■■■□□ 2.84
TAF1C-219	ENST00000568265	WDR7	Q9Y4E6	1490 aa		32.8	■■■□□ 2.84
TAF1C-219	ENST00000568265	TSPOAP1	O95153	1857 aa		32.8	■■■□□ 2.84
TAF1C-219	ENST00000568265	PPRC1	Q5VV67	1664 aa	Known RBP	32.79	■■■□□ 2.84
TAF1C-219	ENST00000568265	FHOD3	Q2V2M9	1422 aa		32.77	■■■□□ 2.84
TAF1C-219	ENST00000568265	MAP3K4	Q9Y6R4	1608 aa		32.77	■■■□□ 2.84
TAF1C-219	ENST00000568265	P3H3	Q8IVL6	736 aa		32.77	■■■□□ 2.84
TAF1C-219	ENST00000568265	ATP10B	O94823	1461 aa		32.67	■■■□□ 2.82
TAF1C-219	ENST00000568265	NUP153	P49790	1475 aa	Known RBP	32.67	■■■□□ 2.82
TAF1C-219	ENST00000568265	KDM6B	O15054	1643 aa		32.65	■■■□□ 2.82
TAF1C-219	ENST00000568265	UBTF	P17480	764 aa	Known RBP	32.64	■■■□□ 2.82
TAF1C-219	ENST00000568265	CFAP43	Q8NDM7	1665 aa		32.64	■■■□□ 2.82
TAF1C-219	ENST00000568265	ARHGAP35	Q9NRY4	1499 aa		32.62	■■■□□ 2.81
TAF1C-219	ENST00000568265	RANGAP1	P46060	587 aa	Predicted RBP	32.62	■■■□□ 2.81
TAF1C-219	ENST00000568265	EHMT2	Q96KQ7	1210 aa		32.56	■■■□□ 2.8
TAF1C-219	ENST00000568265	TEX14	Q8IWB6	1497 aa		32.55	■■■□□ 2.8
TAF1C-219	ENST00000568265	AEBP2	Q6ZN18	517 aa	Predicted RBP	32.54	■■■□□ 2.8
TAF1C-219	ENST00000568265	MAGI3	Q5TCQ9	1506 aa		32.51	■■■□□ 2.79
TAF1C-219	ENST00000568265	ABCA9	Q8IUA7	1624 aa		32.5	■■■□□ 2.79
TAF1C-219	ENST00000568265	FMN1	Q68DA7	1419 aa		32.5	■■■□□ 2.79
TAF1C-219	ENST00000568265	ARID3C	A6NKF2	412 aa		32.48	■■■□□ 2.79
TAF1C-219	ENST00000568265	HECW1	Q76N89	1606 aa		32.47	■■■□□ 2.79
TAF1C-219	ENST00000568265	CD109	Q6YHK3	1445 aa		32.44	■■■□□ 2.78
TAF1C-219	ENST00000568265	KCNH8	Q96L42	1107 aa		32.4	■■■□□ 2.78
TAF1C-219	ENST00000568265	CDK13	Q14004	1512 aa	Known RBP	32.38	■■■□□ 2.77
TAF1C-219	ENST00000568265	COL17A1	Q9UMD9	1497 aa	Predicted RBP	32.37	■■■□□ 2.77
TAF1C-219	ENST00000568265	LRRIQ1	Q96JM4	1722 aa		32.33	■■■□□ 2.77
TAF1C-219	ENST00000568265	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	32.31	■■■□□ 2.76
TAF1C-219	ENST00000568265	HNRNPUL2	Q1KMD3	747 aa	Known RBP	32.31	■■■□□ 2.76
TAF1C-219	ENST00000568265	PCF11	O94913	1555 aa	Known RBP	32.3	■■■□□ 2.76
TAF1C-219	ENST00000568265	CLIP1	P30622	1438 aa		32.28	■■■□□ 2.76
TAF1C-219	ENST00000568265	TTC37	Q6PGP7	1564 aa		32.25	■■■□□ 2.75
TAF1C-219	ENST00000568265	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	32.25	■■■□□ 2.75	3e-8	■■■□□ 16.7
TAF1C-219	ENST00000568265	PLEKHD1	A6NEE1	506 aa		32.24	■■■□□ 2.75
TAF1C-219	ENST00000568265	CASKIN1	Q8WXD9	1431 aa		32.24	■■■□□ 2.75
TAF1C-219	ENST00000568265	ARAP3	Q8WWN8	1544 aa		32.23	■■■□□ 2.75
TAF1C-219	ENST00000568265	NEO1	Q92859	1461 aa		32.22	■■■□□ 2.75
TAF1C-219	ENST00000568265	FYCO1	Q9BQS8	1478 aa		32.19	■■■□□ 2.74
TAF1C-219	ENST00000568265	PHLDB1	Q86UU1	1377 aa		32.19	■■■□□ 2.74
TAF1C-219	ENST00000568265	CCDC18	Q5T9S5	1454 aa		32.17	■■■□□ 2.74
TAF1C-219	ENST00000568265	CFAP74	Q9C0B2	1584 aa		32.15	■■■□□ 2.74
TAF1C-219	ENST00000568265	KIF14	Q15058	1648 aa		32.12	■■■□□ 2.73
TAF1C-219	ENST00000568265	TRO	Q12816	1431 aa	Predicted RBP	32.11	■■■□□ 2.73
TAF1C-219	ENST00000568265	CEP162	Q5TB80	1403 aa		32.09	■■■□□ 2.73
TAF1C-219	ENST00000568265	MYO5C	Q9NQX4	1742 aa		32.08	■■■□□ 2.73
TAF1C-219	ENST00000568265	FRMPD1	Q5SYB0	1578 aa		32.07	■■■□□ 2.72
TAF1C-219	ENST00000568265	ATP1B4	Q9UN42	357 aa	Predicted RBP	32.07	■■■□□ 2.72
TAF1C-219	ENST00000568265	CDK11A	Q9UQ88	783 aa	Predicted RBP	32.06	■■■□□ 2.72
TAF1C-219	ENST00000568265	FANCA	O15360	1455 aa		32.04	■■■□□ 2.72
TAF1C-219	ENST00000568265	RICTOR	Q6R327	1708 aa		32	■■■□□ 2.71
TAF1C-219	ENST00000568265	PLCH2	O75038	1416 aa		32	■■■□□ 2.71
TAF1C-219	ENST00000568265	AKNA	Q7Z591	1439 aa		31.98	■■■□□ 2.71
TAF1C-219	ENST00000568265	DENND4B	O75064	1496 aa	Predicted RBP	31.92	■■■□□ 2.7
TAF1C-219	ENST00000568265	PREX2	Q70Z35	1606 aa		31.92	■■■□□ 2.7
TAF1C-219	ENST00000568265	ADGRL1	O94910	1474 aa		31.91	■■■□□ 2.7
TAF1C-219	ENST00000568265	ZMYM4	Q5VZL5	1548 aa		31.91	■■■□□ 2.7
TAF1C-219	ENST00000568265	KDM4F	A0A1W2PPD8	638 aa		31.89	■■■□□ 2.7
TAF1C-219	ENST00000568265	CDC42BPB	Q9Y5S2	1711 aa		31.89	■■■□□ 2.69
TAF1C-219	ENST00000568265	ARHGEF40	Q8TER5	1519 aa		31.88	■■■□□ 2.69
TAF1C-219	ENST00000568265	RAPGEF3	O95398	923 aa		31.87	■■■□□ 2.69

Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms