RNA–Protein interactions for RNA: ENST00000567868.5

SPSB3-209, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 3

Gene SPSB3, Length 1,628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-209ENST00000567868 CEP170Q5SW79 1584 aa36.06■■■■□ 3.36
SPSB3-209ENST00000567868 CTTNBP2Q8WZ74 1663 aa36.04■■■■□ 3.36
SPSB3-209ENST00000567868 KIAA0586Q9BVV6 1533 aa36.02■■■■□ 3.36
SPSB3-209ENST00000567868 OSCARQ8IYS5 282 aa35.94■■■■□ 3.34
SPSB3-209ENST00000567868 IQGAP2Q13576 1575 aa35.93■■■■□ 3.34
SPSB3-209ENST00000567868 RANGAP1P46060 587 aaPredicted RBP35.92■■■■□ 3.34
SPSB3-209ENST00000567868 CEP162Q5TB80 1403 aa35.9■■■■□ 3.34
SPSB3-209ENST00000567868 CLIP1P30622 1438 aa35.83■■■■□ 3.33
SPSB3-209ENST00000567868 JPH4Q96JJ6 628 aa35.83■■■■□ 3.33
SPSB3-209ENST00000567868 CLASP1Q7Z460 1538 aa35.82■■■■□ 3.32
SPSB3-209ENST00000567868 UGGT2Q9NYU1 1516 aa35.78■■■■□ 3.32
SPSB3-209ENST00000567868 EFCAB5A4FU69 1503 aa35.71■■■■□ 3.31
SPSB3-209ENST00000567868 ARHGAP35Q9NRY4 1499 aa35.7■■■■□ 3.31
SPSB3-209ENST00000567868 SHROOM2Q13796 1616 aa35.67■■■■□ 3.3
SPSB3-209ENST00000567868 SAMD9Q5K651 1589 aa35.66■■■■□ 3.3
SPSB3-209ENST00000567868 P3H3Q8IVL6 736 aa35.65■■■■□ 3.3
SPSB3-209ENST00000567868 CARMIL2Q6F5E8 1435 aa35.63■■■■□ 3.29
SPSB3-209ENST00000567868 PRG4Q92954 1404 aaPredicted RBP35.63■■■■□ 3.29
SPSB3-209ENST00000567868 DISP1Q96F81 1524 aa35.62■■■■□ 3.29
SPSB3-209ENST00000567868 KIAA0556O60303 1618 aa35.57■■■■□ 3.28
SPSB3-209ENST00000567868 ARAP1Q96P48 1450 aa35.56■■■■□ 3.28
SPSB3-209ENST00000567868 FHOD3Q2V2M9 1422 aa35.54■■■■□ 3.28
SPSB3-209ENST00000567868 ERCC6L2Q5T890 1561 aa35.43■■■■□ 3.26
SPSB3-209ENST00000567868 FMN1Q68DA7 1419 aa35.4■■■■□ 3.26
SPSB3-209ENST00000567868 VPS8Q8N3P4 1428 aa35.4■■■■□ 3.26
SPSB3-209ENST00000567868 TTBK1Q5TCY1 1321 aaPredicted RBP35.38■■■■□ 3.25
SPSB3-209ENST00000567868 PTPRGP23470 1445 aa35.35■■■■□ 3.25
SPSB3-209ENST00000567868 ARHGEF11O15085 1522 aa35.27■■■■□ 3.24
SPSB3-209ENST00000567868 CASKIN1Q8WXD9 1431 aa35.23■■■■□ 3.23
SPSB3-209ENST00000567868 ATP1B4Q9UN42 357 aaPredicted RBP35.19■■■■□ 3.22
SPSB3-209ENST00000567868 PCF11O94913 1555 aaKnown RBP35.18■■■■□ 3.22
SPSB3-209ENST00000567868 FYCO1Q9BQS8 1478 aa35.17■■■■□ 3.22
SPSB3-209ENST00000567868 PLB1Q6P1J6 1458 aa35.17■■■■□ 3.22
SPSB3-209ENST00000567868 RIMBP3CA6NJZ7 1639 aa35.14■■■■□ 3.22
SPSB3-209ENST00000567868 RIMBP3BA6NNM3 1639 aa35.14■■■■□ 3.22
SPSB3-209ENST00000567868 RIMBP3Q9UFD9 1639 aa35.14■■■■□ 3.22
SPSB3-209ENST00000567868 RAPGEF6Q8TEU7 1601 aa35.13■■■■□ 3.21
SPSB3-209ENST00000567868 ABCA8O94911 1581 aa35.12■■■■□ 3.21
SPSB3-209ENST00000567868 UACAQ9BZF9 1416 aa35.12■■■■□ 3.21
SPSB3-209ENST00000567868 APLP2Q06481 763 aa35.1■■■■□ 3.21
SPSB3-209ENST00000567868 HECW1Q76N89 1606 aa35.08■■■■□ 3.21
SPSB3-209ENST00000567868 NUP153P49790 1475 aaKnown RBP35.03■■■■□ 3.2
SPSB3-209ENST00000567868 ABCC2Q92887 1545 aa35■■■■□ 3.19
SPSB3-209ENST00000567868 UHRF1BP1LA0JNW5 1464 aa35■■■■□ 3.19
SPSB3-209ENST00000567868 CYB5RLQ6IPT4 315 aa34.98■■■■□ 3.19
SPSB3-209ENST00000567868 EPRSP07814 1512 aaKnown RBP34.97■■■■□ 3.19
SPSB3-209ENST00000567868 CCDC18Q5T9S5 1454 aa34.96■■■■□ 3.19
SPSB3-209ENST00000567868 ARID3CA6NKF2 412 aa34.95■■■■□ 3.19
SPSB3-209ENST00000567868 DNAJC5Q9H3Z4 198 aa34.95■■■■□ 3.19
SPSB3-209ENST00000567868 MAP3K1Q13233 1512 aa34.95■■■■□ 3.19
SPSB3-209ENST00000567868 LRRIQ1Q96JM4 1722 aa34.91■■■■□ 3.18
SPSB3-209ENST00000567868 TIAM1Q13009 1591 aa34.91■■■■□ 3.18
SPSB3-209ENST00000567868 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.91■■■■□ 3.18
SPSB3-209ENST00000567868 HNRNPUL2Q1KMD3 747 aaKnown RBP34.91■■■■□ 3.18
SPSB3-209ENST00000567868 ADCY10Q96PN6 1610 aa34.89■■■■□ 3.18
SPSB3-209ENST00000567868 ATP10BO94823 1461 aa34.89■■■■□ 3.18
SPSB3-209ENST00000567868 CDK13Q14004 1512 aaKnown RBP34.89■■■■□ 3.18
SPSB3-209ENST00000567868 CFAP43Q8NDM7 1665 aa34.86■■■■□ 3.17
SPSB3-209ENST00000567868 KDM5BQ9UGL1 1544 aa34.83■■■■□ 3.17
SPSB3-209ENST00000567868 CDK11AQ9UQ88 783 aaPredicted RBP34.83■■■■□ 3.17
SPSB3-209ENST00000567868 KANK4Q5T7N3 995 aaPredicted RBP34.81■■■■□ 3.16
SPSB3-209ENST00000567868 PPARGC1BQ86YN6 1023 aaKnown RBP34.81■■■■□ 3.16
SPSB3-209ENST00000567868 NPM1P06748 294 aaKnown RBP eCLIP34.8■■■■□ 3.16
SPSB3-209ENST00000567868 LRRC9Q6ZRR7 1453 aa34.77■■■■□ 3.16
SPSB3-209ENST00000567868 MTUS2Q5JR59 1369 aa34.75■■■■□ 3.15
SPSB3-209ENST00000567868 ZCCHC11Q5TAX3 1644 aaKnown RBP34.75■■■■□ 3.15
SPSB3-209ENST00000567868 PLEKHD1A6NEE1 506 aa34.74■■■■□ 3.15
SPSB3-209ENST00000567868 MAGI3Q5TCQ9 1506 aa34.68■■■■□ 3.14
SPSB3-209ENST00000567868 EHBP1L1Q8N3D4 1523 aa34.66■■■■□ 3.14
SPSB3-209ENST00000567868 TROQ12816 1431 aaPredicted RBP34.64■■■■□ 3.14
SPSB3-209ENST00000567868 ASXL2Q76L83 1435 aa34.56■■■■□ 3.12
SPSB3-209ENST00000567868 WDR7Q9Y4E6 1490 aa34.53■■■■□ 3.12
SPSB3-209ENST00000567868 SUPT6HQ7KZ85 1726 aaKnown RBP34.52■■■■□ 3.12
SPSB3-209ENST00000567868 KCNH8Q96L42 1107 aa34.5■■■■□ 3.11
SPSB3-209ENST00000567868 NCOA2Q15596 1464 aa34.49■■■■□ 3.11
SPSB3-209ENST00000567868 MAPKBP1O60336 1514 aa34.49■■■■□ 3.11
SPSB3-209ENST00000567868 KIF14Q15058 1648 aa34.46■■■■□ 3.11
SPSB3-209ENST00000567868 PHLDB1Q86UU1 1377 aa34.4■■■■□ 3.1
SPSB3-209ENST00000567868 ABCC10Q5T3U5 1492 aa34.37■■■■□ 3.09
SPSB3-209ENST00000567868 CCNB3Q8WWL7 1395 aa34.36■■■■□ 3.09
SPSB3-209ENST00000567868 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.33■■■■□ 3.09
SPSB3-209ENST00000567868 MYOM3Q5VTT5 1437 aa34.31■■■■□ 3.08
SPSB3-209ENST00000567868 GPATCH8Q9UKJ3 1502 aaKnown RBP34.27■■■■□ 3.08
SPSB3-209ENST00000567868 TTC37Q6PGP7 1564 aa34.26■■■■□ 3.08
SPSB3-209ENST00000567868 ABCA9Q8IUA7 1624 aa34.24■■■■□ 3.07
SPSB3-209ENST00000567868 TRIM26Q12899 539 aaPredicted RBP34.23■■■■□ 3.07
SPSB3-209ENST00000567868 CFDP1Q9UEE9 299 aaPredicted RBP34.22■■■■□ 3.07
SPSB3-209ENST00000567868 FGD6Q6ZV73 1430 aa34.22■■■■□ 3.07
SPSB3-209ENST00000567868 MIA2Q96PC5 1412 aa34.21■■■■□ 3.07
SPSB3-209ENST00000567868 RRBP1Q9P2E9 1410 aaKnown RBP34.21■■■■□ 3.07
SPSB3-209ENST00000567868 ITSN2Q9NZM3 1697 aa34.2■■■■□ 3.07
SPSB3-209ENST00000567868 CDC42BPAQ5VT25 1732 aa34.19■■■■□ 3.06
SPSB3-209ENST00000567868 FAM69CQ0P6D2 419 aa34.19■■■■□ 3.06
SPSB3-209ENST00000567868 GLI2P10070 1586 aa34.18■■■■□ 3.06
SPSB3-209ENST00000567868 PLCH2O75038 1416 aa34.18■■■■□ 3.06
SPSB3-209ENST00000567868 DIP2BQ9P265 1576 aa34.17■■■■□ 3.06
SPSB3-209ENST00000567868 MYO5CQ9NQX4 1742 aa34.16■■■■□ 3.06
SPSB3-209ENST00000567868 PREX2Q70Z35 1606 aa34.14■■■■□ 3.06
SPSB3-209ENST00000567868 CD109Q6YHK3 1445 aa34.14■■■■□ 3.06
SPSB3-209ENST00000567868 FAM50AQ14320 339 aaKnown RBP34.11■■■■□ 3.05
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms