RNA–Protein interactions for RNA: ENST00000567776.2

THSD4-205, Transcript of thrombospondin type 1 domain containing 4, humanhuman

TSL 5

Gene THSD4, Length 5,589 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THSD4-205ENST00000567776 KIF21BO75037 1637 aa12.24□□□□□ -0.45
THSD4-205ENST00000567776 NBR1Q14596 966 aa12.23□□□□□ -0.45
THSD4-205ENST00000567776 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.22□□□□□ -0.45
THSD4-205ENST00000567776 SCAF1Q9H7N4 1312 aaKnown RBP12.22□□□□□ -0.45
THSD4-205ENST00000567776 SOGA1O94964 1423 aa12.21□□□□□ -0.45
THSD4-205ENST00000567776 TMC1Q8TDI8 760 aa12.2□□□□□ -0.46
THSD4-205ENST00000567776 FHAD1B1AJZ9 1412 aa12.2□□□□□ -0.46
THSD4-205ENST00000567776 PEG3Q9GZU2 1588 aa12.19□□□□□ -0.46
THSD4-205ENST00000567776 SALL2Q9Y467 1007 aaPredicted RBP12.18□□□□□ -0.46
THSD4-205ENST00000567776 MRS2Q9HD23 443 aa12.17□□□□□ -0.46
THSD4-205ENST00000567776 MIER1Q8N108 512 aa12.16□□□□□ -0.46
THSD4-205ENST00000567776 ERICH3Q5RHP9 1530 aa12.15□□□□□ -0.46
THSD4-205ENST00000567776 WDR43Q15061 677 aaKnown RBP eCLIP12.15□□□□□ -0.47
THSD4-205ENST00000567776 CHGAP10645 457 aaKnown RBP12.13□□□□□ -0.47
THSD4-205ENST00000567776 HMGXB3Q12766 1538 aa12.13□□□□□ -0.47
THSD4-205ENST00000567776 TIMELESSQ9UNS1 1208 aa12.12□□□□□ -0.47
THSD4-205ENST00000567776 IRX6P78412 446 aaPredicted RBP12.11□□□□□ -0.47
THSD4-205ENST00000567776 ARXQ96QS3 562 aa12.11□□□□□ -0.47
THSD4-205ENST00000567776 CHIC2Q9UKJ5 165 aa12.1□□□□□ -0.47
THSD4-205ENST00000567776 NCAPD3P42695 1498 aa12.1□□□□□ -0.47
THSD4-205ENST00000567776 DDRGK1Q96HY6 314 aa12.1□□□□□ -0.47
THSD4-205ENST00000567776 STAG3Q9UJ98 1225 aa12.09□□□□□ -0.47
THSD4-205ENST00000567776 ESF1Q9H501 851 aaKnown RBP12.08□□□□□ -0.47
THSD4-205ENST00000567776 TOP2BQ02880 1626 aa12.05□□□□□ -0.48
THSD4-205ENST00000567776 EIF4G1Q04637 1599 aaKnown RBP12.05□□□□□ -0.48
THSD4-205ENST00000567776 BECN1Q14457 450 aa12.05□□□□□ -0.48
THSD4-205ENST00000567776 EIF4G2P78344 907 aaKnown RBP eCLIP12.05□□□□□ -0.48
THSD4-205ENST00000567776 CCNB3Q8WWL7 1395 aa12.04□□□□□ -0.48
THSD4-205ENST00000567776 MYH16Q9H6N6 1097 aa12.04□□□□□ -0.48
THSD4-205ENST00000567776 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.04□□□□□ -0.48
THSD4-205ENST00000567776 MTUS2Q5JR59 1369 aa12.03□□□□□ -0.48
THSD4-205ENST00000567776 KDM2AQ9Y2K7 1162 aa12.03□□□□□ -0.48
THSD4-205ENST00000567776 CUX2O14529 1486 aa12.03□□□□□ -0.48
THSD4-205ENST00000567776 RAPGEF2Q9Y4G8 1499 aa12.03□□□□□ -0.48
THSD4-205ENST00000567776 ANP32EQ9BTT0 268 aa12.03□□□□□ -0.48
THSD4-205ENST00000567776 CARMIL1Q5VZK9 1371 aa12.02□□□□□ -0.48
THSD4-205ENST00000567776 HIRIP3Q9BW71 556 aaPredicted RBP12.02□□□□□ -0.49
THSD4-205ENST00000567776 TSPY4P0CV99 314 aa12.01□□□□□ -0.49
THSD4-205ENST00000567776 TSPY10P0CW01 314 aa12.01□□□□□ -0.49
THSD4-205ENST00000567776 CADPSQ9ULU8 1353 aa12□□□□□ -0.49
THSD4-205ENST00000567776 TRIM44Q96DX7 344 aaPredicted RBP12□□□□□ -0.49
THSD4-205ENST00000567776 UNC13AQ9UPW8 1703 aa11.99□□□□□ -0.49
THSD4-205ENST00000567776 FMN1Q68DA7 1419 aa11.98□□□□□ -0.49
THSD4-205ENST00000567776 BICRAQ9NZM4 1560 aa11.98□□□□□ -0.49
THSD4-205ENST00000567776 GOLGA6L22H0YM25 854 aa11.97□□□□□ -0.49
THSD4-205ENST00000567776 NCLP19338 710 aaKnown RBP11.97□□□□□ -0.49
THSD4-205ENST00000567776 ARHGAP35Q9NRY4 1499 aa11.97□□□□□ -0.49
THSD4-205ENST00000567776 SYNJ1O43426 1573 aa11.97□□□□□ -0.49
THSD4-205ENST00000567776 PPM1GO15355 546 aaPredicted RBP11.95□□□□□ -0.5
THSD4-205ENST00000567776 NPM1P06748 294 aaKnown RBP eCLIP11.95□□□□□ -0.5
THSD4-205ENST00000567776 SETD5Q9C0A6 1442 aa11.95□□□□□ -0.5
THSD4-205ENST00000567776 BIVM-ERCC5R4GMW8 1640 aa11.95□□□□□ -0.5
THSD4-205ENST00000567776 PDS5BQ9NTI5 1447 aa11.94□□□□□ -0.5
THSD4-205ENST00000567776 CFTRP13569 1480 aa11.93□□□□□ -0.5
THSD4-205ENST00000567776 RRP7BPQ9NSQ0 103 aa11.93□□□□□ -0.5
THSD4-205ENST00000567776 SUPT16HQ9Y5B9 1047 aaKnown RBP11.92□□□□□ -0.5
THSD4-205ENST00000567776 RUSC2Q8N2Y8 1516 aa11.9□□□□□ -0.5
THSD4-205ENST00000567776 PPP4R2Q9NY27 417 aa11.9□□□□□ -0.5
THSD4-205ENST00000567776 EFCAB5A4FU69 1503 aa11.9□□□□□ -0.5
THSD4-205ENST00000567776 PRXQ9BXM0 1461 aa11.89□□□□□ -0.51
THSD4-205ENST00000567776 ERICH6BQ5W0A0 696 aa11.89□□□□□ -0.51
THSD4-205ENST00000567776 MAP3K1Q13233 1512 aa11.88□□□□□ -0.51
THSD4-205ENST00000567776 CDK11BP21127 795 aaKnown RBP11.88□□□□□ -0.51
THSD4-205ENST00000567776 TNNT2P45379 298 aaPredicted RBP11.87□□□□□ -0.51
THSD4-205ENST00000567776 CFAP53Q96M91 514 aa11.87□□□□□ -0.51
THSD4-205ENST00000567776 CUX1P39880 1505 aa11.87□□□□□ -0.51
THSD4-205ENST00000567776 PTMAP06454 111 aaKnown RBP11.87□□□□□ -0.51
THSD4-205ENST00000567776 PLPPR3Q6T4P5 718 aa11.87□□□□□ -0.51
THSD4-205ENST00000567776 NOP58Q9Y2X3 529 aaKnown RBP11.86□□□□□ -0.51
THSD4-205ENST00000567776 CDCA8Q53HL2 280 aa11.86□□□□□ -0.51
THSD4-205ENST00000567776 CASC1Q6TDU7 716 aa11.86□□□□□ -0.51
THSD4-205ENST00000567776 RRBP1Q9P2E9 1410 aaKnown RBP11.85□□□□□ -0.51
THSD4-205ENST00000567776 KNSTRNQ9Y448 316 aa11.85□□□□□ -0.51
THSD4-205ENST00000567776 FANCD2Q9BXW9 1451 aa11.84□□□□□ -0.51
THSD4-205ENST00000567776 LAS1LQ9Y4W2 734 aaKnown RBP11.84□□□□□ -0.51
THSD4-205ENST00000567776 FTSJ3Q8IY81 847 aaKnown RBP11.83□□□□□ -0.52
THSD4-205ENST00000567776 CCER2I3L3R5 266 aa11.82□□□□□ -0.52
THSD4-205ENST00000567776 DNTTIP2Q5QJE6 756 aaKnown RBP11.82□□□□□ -0.52
THSD4-205ENST00000567776 NAP1L5Q96NT1 182 aaPredicted RBP11.82□□□□□ -0.52
THSD4-205ENST00000567776 ZRSR1Q15695 479 aaKnown RBP11.81□□□□□ -0.52
THSD4-205ENST00000567776 CARD11Q9BXL7 1154 aa11.81□□□□□ -0.52
THSD4-205ENST00000567776 CHMP7Q8WUX9 453 aaPredicted RBP11.81□□□□□ -0.52
THSD4-205ENST00000567776 FYCO1Q9BQS8 1478 aa11.81□□□□□ -0.52
THSD4-205ENST00000567776 CCDC18Q5T9S5 1454 aa11.81□□□□□ -0.52
THSD4-205ENST00000567776 FGD5Q6ZNL6 1462 aa11.81□□□□□ -0.52
THSD4-205ENST00000567776 DHX57Q6P158 1386 aaKnown RBP11.8□□□□□ -0.52
THSD4-205ENST00000567776 SENP3-EIF4A1A0A087X0R7 540 aa11.8□□□□□ -0.52
THSD4-205ENST00000567776 RGL3Q3MIN7 710 aa11.8□□□□□ -0.52
THSD4-205ENST00000567776 CUL7Q14999 1698 aa11.79□□□□□ -0.52
THSD4-205ENST00000567776 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.79□□□□□ -0.52
THSD4-205ENST00000567776 ARAP1Q96P48 1450 aa11.79□□□□□ -0.52
THSD4-205ENST00000567776 RGS3P49796 1198 aa11.78□□□□□ -0.52
THSD4-205ENST00000567776 RAB3GAP2Q9H2M9 1393 aa11.78□□□□□ -0.52
THSD4-205ENST00000567776 PLEKHD1A6NEE1 506 aa11.78□□□□□ -0.52
THSD4-205ENST00000567776 IGF1RP08069 1367 aa11.78□□□□□ -0.52
THSD4-205ENST00000567776 RTN4Q9NQC3 1192 aaKnown RBP11.78□□□□□ -0.52
THSD4-205ENST00000567776 PPP1R15AO75807 674 aaPredicted RBP11.77□□□□□ -0.52
THSD4-205ENST00000567776 DNMBPQ6XZF7 1577 aa11.77□□□□□ -0.52
THSD4-205ENST00000567776 CASKIN1Q8WXD9 1431 aa11.77□□□□□ -0.53
THSD4-205ENST00000567776 CC2D2AQ9P2K1 1620 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms