RNA–Protein interactions for RNA: ENST00000567776.2

THSD4-205, Transcript of thrombospondin type 1 domain containing 4, humanhuman

TSL 5

Gene THSD4, Length 5,589 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THSD4-205ENST00000567776 NISCHQ9Y2I1 1504 aa16.47■□□□□ 0.23
THSD4-205ENST00000567776 DCAF8L2P0C7V8 631 aa15.34■□□□□ 0.05
THSD4-205ENST00000567776 SUPT5HO00267 1087 aaKnown RBP14.78□□□□□ -0.04
THSD4-205ENST00000567776 PELP1Q8IZL8 1130 aaKnown RBP14.54□□□□□ -0.08
THSD4-205ENST00000567776 SHROOM4Q9ULL8 1493 aa14.43□□□□□ -0.1
THSD4-205ENST00000567776 EHMT2Q96KQ7 1210 aa14.31□□□□□ -0.12
THSD4-205ENST00000567776 APLP2Q06481 763 aa14.17□□□□□ -0.14
THSD4-205ENST00000567776 CCDC180Q9P1Z9 1646 aa14.15□□□□□ -0.14
THSD4-205ENST00000567776 PCGF6Q9BYE7 350 aa14.03□□□□□ -0.16
THSD4-205ENST00000567776 CENPBP07199 599 aaPredicted RBP13.99□□□□□ -0.17
THSD4-205ENST00000567776 FAM9AQ8IZU1 332 aaPredicted RBP13.95□□□□□ -0.18
THSD4-205ENST00000567776 ZEB1P37275 1124 aaPredicted RBP13.95□□□□□ -0.18
THSD4-205ENST00000567776 ERICH6Q7L0X2 663 aa13.93□□□□□ -0.18
THSD4-205ENST00000567776 TTBK1Q5TCY1 1321 aaPredicted RBP13.89□□□□□ -0.19
THSD4-205ENST00000567776 CCER1Q8TC90 406 aaPredicted RBP13.88□□□□□ -0.19
THSD4-205ENST00000567776 ZCCHC6Q5VYS8 1495 aaKnown RBP13.87□□□□□ -0.19
THSD4-205ENST00000567776 MYT1Q01538 1121 aa13.77□□□□□ -0.21
THSD4-205ENST00000567776 TRIM41Q8WV44 630 aa13.7□□□□□ -0.22
THSD4-205ENST00000567776 NEFLP07196 543 aa13.65□□□□□ -0.22
THSD4-205ENST00000567776 RANGAP1P46060 587 aaPredicted RBP13.64□□□□□ -0.23
THSD4-205ENST00000567776 DCAF1Q9Y4B6 1507 aa13.63□□□□□ -0.23
THSD4-205ENST00000567776 YTHDC1Q96MU7 727 aaKnown RBP13.58□□□□□ -0.24
THSD4-205ENST00000567776 UBTFP17480 764 aaKnown RBP13.55□□□□□ -0.24
THSD4-205ENST00000567776 ATP1B4Q9UN42 357 aaPredicted RBP13.54□□□□□ -0.24
THSD4-205ENST00000567776 CHIC1Q5VXU3 224 aa13.45□□□□□ -0.26
THSD4-205ENST00000567776 TRIM26Q12899 539 aaPredicted RBP13.45□□□□□ -0.26
THSD4-205ENST00000567776 HRCP23327 699 aa13.4□□□□□ -0.26
THSD4-205ENST00000567776 PPARGC1BQ86YN6 1023 aaKnown RBP13.35□□□□□ -0.27
THSD4-205ENST00000567776 MYO15BQ96JP2 1530 aa13.3□□□□□ -0.28
THSD4-205ENST00000567776 DAXXQ9UER7 740 aaPredicted RBP13.26□□□□□ -0.29
THSD4-205ENST00000567776 NACADO15069 1562 aa13.25□□□□□ -0.29
THSD4-205ENST00000567776 ITGAEP38570 1179 aa13.15□□□□□ -0.31
THSD4-205ENST00000567776 SCRIBQ14160 1630 aa13.14□□□□□ -0.31
THSD4-205ENST00000567776 POLR3GLQ9BT43 218 aa13.12□□□□□ -0.31
THSD4-205ENST00000567776 LOC105371045A0A1W2PR82 267 aa13.12□□□□□ -0.31
THSD4-205ENST00000567776 RB1CC1Q8TDY2 1594 aa13.11□□□□□ -0.31
THSD4-205ENST00000567776 HNRNPUL2Q1KMD3 747 aaKnown RBP13.1□□□□□ -0.31
THSD4-205ENST00000567776 ABCC9O60706 1549 aa13.1□□□□□ -0.31
THSD4-205ENST00000567776 DIEXFQ68CQ4 756 aaKnown RBP13.04□□□□□ -0.32
THSD4-205ENST00000567776 RTL5Q5HYW3 569 aaPredicted RBP13.03□□□□□ -0.32
THSD4-205ENST00000567776 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.01□□□□□ -0.33
THSD4-205ENST00000567776 MYT1LQ9UL68 1186 aa12.98□□□□□ -0.33
THSD4-205ENST00000567776 ZNF316A6NFI3 1004 aaPredicted RBP12.97□□□□□ -0.33
THSD4-205ENST00000567776 CNGB1Q14028 1251 aaPredicted RBP12.97□□□□□ -0.33
THSD4-205ENST00000567776 RSF1Q96T23 1441 aaPredicted RBP12.96□□□□□ -0.33
THSD4-205ENST00000567776 CLSPNQ9HAW4 1339 aa12.9□□□□□ -0.34
THSD4-205ENST00000567776 BAZ1AQ9NRL2 1556 aaPredicted RBP12.89□□□□□ -0.35
THSD4-205ENST00000567776 EEA1Q15075 1411 aa12.89□□□□□ -0.35
THSD4-205ENST00000567776 GTF3C3Q9Y5Q9 886 aa12.85□□□□□ -0.35
THSD4-205ENST00000567776 SLC4A1APQ9BWU0 796 aaKnown RBP12.83□□□□□ -0.36
THSD4-205ENST00000567776 FAM50AQ14320 339 aaKnown RBP12.81□□□□□ -0.36
THSD4-205ENST00000567776 BCANQ96GW7 911 aa12.8□□□□□ -0.36
THSD4-205ENST00000567776 CDK11AQ9UQ88 783 aaPredicted RBP12.78□□□□□ -0.36
THSD4-205ENST00000567776 ANP32CO43423 234 aa12.76□□□□□ -0.37
THSD4-205ENST00000567776 TRIM52Q96A61 297 aa12.76□□□□□ -0.37
THSD4-205ENST00000567776 NEUROD1Q13562 356 aa12.75□□□□□ -0.37
THSD4-205ENST00000567776 CSRNP3Q8WYN3 585 aa12.67□□□□□ -0.38
THSD4-205ENST00000567776 ACIN1Q9UKV3 1341 aaKnown RBP12.67□□□□□ -0.38
THSD4-205ENST00000567776 TOP2AP11388 1531 aaKnown RBP12.66□□□□□ -0.38
THSD4-205ENST00000567776 GOLGA3Q08378 1498 aa12.62□□□□□ -0.39
THSD4-205ENST00000567776 ZBTB47Q9UFB7 747 aaPredicted RBP12.62□□□□□ -0.39
THSD4-205ENST00000567776 ZNF326Q5BKZ1 582 aaKnown RBP12.61□□□□□ -0.39
THSD4-205ENST00000567776 MROH2BQ7Z745 1585 aa12.59□□□□□ -0.39
THSD4-205ENST00000567776 TNIKQ9UKE5 1360 aa12.59□□□□□ -0.39
THSD4-205ENST00000567776 ANP32AP39687 249 aaKnown RBP12.58□□□□□ -0.4
THSD4-205ENST00000567776 CANXP27824 592 aaKnown RBP12.56□□□□□ -0.4
THSD4-205ENST00000567776 SMARCA2P51531 1590 aa12.55□□□□□ -0.4
THSD4-205ENST00000567776 CEP164Q9UPV0 1460 aa12.55□□□□□ -0.4
THSD4-205ENST00000567776 CECR2Q9BXF3 1484 aa12.55□□□□□ -0.4
THSD4-205ENST00000567776 SMARCA4P51532 1647 aa12.53□□□□□ -0.4
THSD4-205ENST00000567776 BAZ1BQ9UIG0 1483 aaKnown RBP12.52□□□□□ -0.41
THSD4-205ENST00000567776 PABPN1Q86U42 306 aaKnown RBP eCLIP12.51□□□□□ -0.41
THSD4-205ENST00000567776 WRNQ14191 1432 aaPredicted RBP eCLIP12.51□□□□□ -0.41
THSD4-205ENST00000567776 CEP162Q5TB80 1403 aa12.48□□□□□ -0.41
THSD4-205ENST00000567776 WIZO95785 1651 aa12.48□□□□□ -0.41
THSD4-205ENST00000567776 NPM2Q86SE8 214 aaKnown RBP12.46□□□□□ -0.42
THSD4-205ENST00000567776 CCDC88BA6NC98 1476 aa12.45□□□□□ -0.42
THSD4-205ENST00000567776 NEFMP07197 916 aa12.45□□□□□ -0.42
THSD4-205ENST00000567776 FKBP8Q14318 412 aa12.44□□□□□ -0.42
THSD4-205ENST00000567776 CLIP1P30622 1438 aa12.42□□□□□ -0.42
THSD4-205ENST00000567776 BCL11AQ9H165 835 aa12.41□□□□□ -0.42
THSD4-205ENST00000567776 ANP32BQ92688 251 aaKnown RBP12.38□□□□□ -0.43
THSD4-205ENST00000567776 SLC24A1O60721 1099 aa12.37□□□□□ -0.43
THSD4-205ENST00000567776 P3H3Q8IVL6 736 aa12.36□□□□□ -0.43
THSD4-205ENST00000567776 TONSLQ96HA7 1378 aa12.36□□□□□ -0.43
THSD4-205ENST00000567776 EIF5BO60841 1220 aaKnown RBP12.36□□□□□ -0.43
THSD4-205ENST00000567776 HNRNPUQ00839 825 aaKnown RBP eCLIP12.35□□□□□ -0.43
THSD4-205ENST00000567776 KIF27Q86VH2 1401 aa12.35□□□□□ -0.43
THSD4-205ENST00000567776 FBLN2P98095 1184 aa12.33□□□□□ -0.44
THSD4-205ENST00000567776 UPF2Q9HAU5 1272 aaKnown RBP12.32□□□□□ -0.44
THSD4-205ENST00000567776 HSP90AA1P07900 732 aaKnown RBP12.31□□□□□ -0.44
THSD4-205ENST00000567776 ARID3CA6NKF2 412 aa12.3□□□□□ -0.44
THSD4-205ENST00000567776 DDX10Q13206 875 aaKnown RBP12.29□□□□□ -0.44
THSD4-205ENST00000567776 ZNF777Q9ULD5 760 aaPredicted RBP12.29□□□□□ -0.44
THSD4-205ENST00000567776 FAM9BQ8IZU0 186 aa12.29□□□□□ -0.44
THSD4-205ENST00000567776 GLIPR1L2Q4G1C9 344 aa12.28□□□□□ -0.44
THSD4-205ENST00000567776 VPS8Q8N3P4 1428 aa12.27□□□□□ -0.45
THSD4-205ENST00000567776 CCDC136Q96JN2 1154 aa12.26□□□□□ -0.45
THSD4-205ENST00000567776 ABCC8Q09428 1581 aa12.25□□□□□ -0.45
THSD4-205ENST00000567776 ATAD2BQ9ULI0 1458 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms