RNA–Protein interactions for RNA: ENST00000567720.5

COMMD4-220, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-220ENST00000567720 PRXQ9BXM0 1461 aa28.96■■■□□ 2.23
COMMD4-220ENST00000567720 CTTNBP2Q8WZ74 1663 aa28.94■■■□□ 2.22
COMMD4-220ENST00000567720 ERCC6L2Q5T890 1561 aa28.92■■■□□ 2.22
COMMD4-220ENST00000567720 KIAA0586Q9BVV6 1533 aa28.89■■■□□ 2.22
COMMD4-220ENST00000567720 ARAP1Q96P48 1450 aa28.89■■■□□ 2.22
COMMD4-220ENST00000567720 IQGAP2Q13576 1575 aa28.87■■■□□ 2.21
COMMD4-220ENST00000567720 KIF21BO75037 1637 aa28.83■■■□□ 2.21
COMMD4-220ENST00000567720 CSRNP3Q8WYN3 585 aa28.8■■■□□ 2.2
COMMD4-220ENST00000567720 FAM9AQ8IZU1 332 aaPredicted RBP28.76■■■□□ 2.19
COMMD4-220ENST00000567720 PRG4Q92954 1404 aaPredicted RBP28.74■■■□□ 2.19
COMMD4-220ENST00000567720 JPH4Q96JJ6 628 aa28.69■■■□□ 2.18
COMMD4-220ENST00000567720 UGGT2Q9NYU1 1516 aa28.68■■■□□ 2.18
COMMD4-220ENST00000567720 KIAA0556O60303 1618 aa28.62■■■□□ 2.17
COMMD4-220ENST00000567720 DISP1Q96F81 1524 aa28.62■■■□□ 2.17
COMMD4-220ENST00000567720 CYB5RLQ6IPT4 315 aa28.6■■■□□ 2.17
COMMD4-220ENST00000567720 GOLGA3Q08378 1498 aa28.56■■■□□ 2.16
COMMD4-220ENST00000567720 CARMIL2Q6F5E8 1435 aa28.52■■■□□ 2.16
COMMD4-220ENST00000567720 SAMD9Q5K651 1589 aa28.5■■■□□ 2.15
COMMD4-220ENST00000567720 ADCY10Q96PN6 1610 aa28.45■■■□□ 2.14
COMMD4-220ENST00000567720 TNIKQ9UKE5 1360 aa28.43■■■□□ 2.14
COMMD4-220ENST00000567720 EHMT2Q96KQ7 1210 aa28.38■■■□□ 2.13
COMMD4-220ENST00000567720 PTPRGP23470 1445 aa28.36■■■□□ 2.13
COMMD4-220ENST00000567720 EFCAB5A4FU69 1503 aa28.34■■■□□ 2.13
COMMD4-220ENST00000567720 ABCC2Q92887 1545 aa28.29■■■□□ 2.12
COMMD4-220ENST00000567720 UBTFP17480 764 aaKnown RBP28.28■■■□□ 2.12
COMMD4-220ENST00000567720 TTBK1Q5TCY1 1321 aaPredicted RBP28.27■■■□□ 2.12
COMMD4-220ENST00000567720 ABCA8O94911 1581 aa28.26■■■□□ 2.11
COMMD4-220ENST00000567720 UHRF1BP1LA0JNW5 1464 aa28.25■■■□□ 2.11
COMMD4-220ENST00000567720 UACAQ9BZF9 1416 aa28.24■■■□□ 2.11
COMMD4-220ENST00000567720 FHOD3Q2V2M9 1422 aa28.23■■■□□ 2.11
COMMD4-220ENST00000567720 PLB1Q6P1J6 1458 aa28.22■■■□□ 2.11
COMMD4-220ENST00000567720 RANGAP1P46060 587 aaPredicted RBP28.2■■■□□ 2.1
COMMD4-220ENST00000567720 ZCCHC11Q5TAX3 1644 aaKnown RBP28.19■■■□□ 2.1
COMMD4-220ENST00000567720 ARHGAP35Q9NRY4 1499 aa28.19■■■□□ 2.1
COMMD4-220ENST00000567720 MAPKBP1O60336 1514 aa28.18■■■□□ 2.1
COMMD4-220ENST00000567720 P3H3Q8IVL6 736 aa28.17■■■□□ 2.1
COMMD4-220ENST00000567720 RAPGEF6Q8TEU7 1601 aa28.17■■■□□ 2.1
COMMD4-220ENST00000567720 KIF13AQ9H1H9 1805 aa28.14■■■□□ 2.1
COMMD4-220ENST00000567720 KDM5BQ9UGL1 1544 aa28.13■■■□□ 2.09
COMMD4-220ENST00000567720 DIP2BQ9P265 1576 aa28.06■■■□□ 2.08
COMMD4-220ENST00000567720 CLIP1P30622 1438 aa28.01■■■□□ 2.08
COMMD4-220ENST00000567720 NUP153P49790 1475 aaKnown RBP28.01■■■□□ 2.07
COMMD4-220ENST00000567720 NPM1P06748 294 aaKnown RBP eCLIP28■■■□□ 2.07
COMMD4-220ENST00000567720 ASXL2Q76L83 1435 aa27.98■■■□□ 2.07
COMMD4-220ENST00000567720 PCF11O94913 1555 aaKnown RBP27.97■■■□□ 2.07
COMMD4-220ENST00000567720 LRRIQ1Q96JM4 1722 aa27.97■■■□□ 2.07
COMMD4-220ENST00000567720 HECW1Q76N89 1606 aa27.96■■■□□ 2.07
COMMD4-220ENST00000567720 ABCC10Q5T3U5 1492 aa27.96■■■□□ 2.07
COMMD4-220ENST00000567720 CEP162Q5TB80 1403 aa27.96■■■□□ 2.07
COMMD4-220ENST00000567720 FMN1Q68DA7 1419 aa27.96■■■□□ 2.07
COMMD4-220ENST00000567720 TRHP20396 242 aaPredicted RBP27.93■■■□□ 2.06
COMMD4-220ENST00000567720 ATP10BO94823 1461 aa27.92■■■□□ 2.06
COMMD4-220ENST00000567720 LOC105371045A0A1W2PR82 267 aa27.92■■■□□ 2.06
COMMD4-220ENST00000567720 WDR7Q9Y4E6 1490 aa27.9■■■□□ 2.06
COMMD4-220ENST00000567720 CDK13Q14004 1512 aaKnown RBP27.87■■■□□ 2.05
COMMD4-220ENST00000567720 GLI2P10070 1586 aa27.86■■■□□ 2.05
COMMD4-220ENST00000567720 ARID3CA6NKF2 412 aa27.85■■■□□ 2.05
COMMD4-220ENST00000567720 EPRSP07814 1512 aaKnown RBP27.85■■■□□ 2.05
COMMD4-220ENST00000567720 TSPOAP1O95153 1857 aa27.83■■■□□ 2.05
COMMD4-220ENST00000567720 MAP3K4Q9Y6R4 1608 aa27.82■■■□□ 2.04
COMMD4-220ENST00000567720 PPRC1Q5VV67 1664 aaKnown RBP27.81■■■□□ 2.04
COMMD4-220ENST00000567720 CASKIN1Q8WXD9 1431 aa27.8■■■□□ 2.04
COMMD4-220ENST00000567720 FYCO1Q9BQS8 1478 aa27.8■■■□□ 2.04
COMMD4-220ENST00000567720 CFAP43Q8NDM7 1665 aa27.77■■■□□ 2.04
COMMD4-220ENST00000567720 FAM69CQ0P6D2 419 aa27.75■■■□□ 2.03
COMMD4-220ENST00000567720 ABCA9Q8IUA7 1624 aa27.71■■■□□ 2.03
COMMD4-220ENST00000567720 CCDC18Q5T9S5 1454 aa27.7■■■□□ 2.03
COMMD4-220ENST00000567720 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.65■■■□□ 2.02
COMMD4-220ENST00000567720 HNRNPUL2Q1KMD3 747 aaKnown RBP27.65■■■□□ 2.02
COMMD4-220ENST00000567720 ATP1B4Q9UN42 357 aaPredicted RBP27.64■■■□□ 2.02
COMMD4-220ENST00000567720 TTC37Q6PGP7 1564 aa27.64■■■□□ 2.01
COMMD4-220ENST00000567720 KIF14Q15058 1648 aa27.63■■■□□ 2.01
COMMD4-220ENST00000567720 MAGI3Q5TCQ9 1506 aa27.62■■■□□ 2.01
COMMD4-220ENST00000567720 VPS8Q8N3P4 1428 aa27.61■■■□□ 2.01
COMMD4-220ENST00000567720 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.59■■■□□ 2.01
COMMD4-220ENST00000567720 KCNH8Q96L42 1107 aa27.58■■■□□ 2.01
COMMD4-220ENST00000567720 TROQ12816 1431 aaPredicted RBP27.55■■■□□ 2
COMMD4-220ENST00000567720 CD109Q6YHK3 1445 aa27.54■■■□□ 2
COMMD4-220ENST00000567720 TEX14Q8IWB6 1497 aa27.53■■■□□ 2
COMMD4-220ENST00000567720 PLEKHD1A6NEE1 506 aa27.53■■■□□ 2
COMMD4-220ENST00000567720 MYO5CQ9NQX4 1742 aa27.53■■■□□ 2
COMMD4-220ENST00000567720 KDM6BO15054 1643 aa27.52■■■□□ 2
COMMD4-220ENST00000567720 TIAM1Q13009 1591 aa27.5■■□□□ 1.99
COMMD4-220ENST00000567720 CDK11AQ9UQ88 783 aaPredicted RBP27.45■■□□□ 1.98
COMMD4-220ENST00000567720 EHBP1L1Q8N3D4 1523 aa27.45■■□□□ 1.98
COMMD4-220ENST00000567720 CFAP74Q9C0B2 1584 aa27.43■■□□□ 1.98
COMMD4-220ENST00000567720 CDC42BPAQ5VT25 1732 aa27.43■■□□□ 1.98
COMMD4-220ENST00000567720 PREX2Q70Z35 1606 aa27.42■■□□□ 1.98
COMMD4-220ENST00000567720 CDC42BPBQ9Y5S2 1711 aa27.4■■□□□ 1.98
COMMD4-220ENST00000567720 ARAP3Q8WWN8 1544 aa27.38■■□□□ 1.97
COMMD4-220ENST00000567720 NEO1Q92859 1461 aa27.36■■□□□ 1.97
COMMD4-220ENST00000567720 COL17A1Q9UMD9 1497 aaPredicted RBP27.36■■□□□ 1.97
COMMD4-220ENST00000567720 MAP3K1Q13233 1512 aa27.36■■□□□ 1.97
COMMD4-220ENST00000567720 MTUS2Q5JR59 1369 aa27.34■■□□□ 1.97
COMMD4-220ENST00000567720 SUPT6HQ7KZ85 1726 aaKnown RBP27.33■■□□□ 1.97
COMMD4-220ENST00000567720 FANCAO15360 1455 aa27.33■■□□□ 1.97
COMMD4-220ENST00000567720 PLCH2O75038 1416 aa27.32■■□□□ 1.96
COMMD4-220ENST00000567720 FRMPD1Q5SYB0 1578 aa27.31■■□□□ 1.96
COMMD4-220ENST00000567720 LRRC9Q6ZRR7 1453 aa27.29■■□□□ 1.96
COMMD4-220ENST00000567720 ITSN2Q9NZM3 1697 aa27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 115.8 ms