RNA–Protein interactions for RNA: ENST00000567671.1

RAB11A-206, Transcript of RAB11A, member RAS oncogene family, humanhuman

TSL 3

Gene RAB11A, Length 635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11A-206ENST00000567671 CARMIL1Q5VZK9 1371 aa12.1□□□□□ -0.47
RAB11A-206ENST00000567671 CUL7Q14999 1698 aa12.07□□□□□ -0.48
RAB11A-206ENST00000567671 ADAMTS12P58397 1594 aa12.07□□□□□ -0.48
RAB11A-206ENST00000567671 OSCARQ8IYS5 282 aa12.05□□□□□ -0.48
RAB11A-206ENST00000567671 RAPGEF2Q9Y4G8 1499 aa12.05□□□□□ -0.48
RAB11A-206ENST00000567671 GRIN2AQ12879 1464 aa12.03□□□□□ -0.48
RAB11A-206ENST00000567671 PRXQ9BXM0 1461 aa12.03□□□□□ -0.48
RAB11A-206ENST00000567671 HOXD11P31277 338 aaPredicted RBP11.99□□□□□ -0.49
RAB11A-206ENST00000567671 CNKSR2Q8WXI2 1034 aa11.98□□□□□ -0.49
RAB11A-206ENST00000567671 CHD1O14646 1710 aa11.97□□□□□ -0.49
RAB11A-206ENST00000567671 GOLGA3Q08378 1498 aa11.97□□□□□ -0.49
RAB11A-206ENST00000567671 NUP160Q12769 1436 aa11.97□□□□□ -0.49
RAB11A-206ENST00000567671 EHMT2Q96KQ7 1210 aa11.97□□□□□ -0.49
RAB11A-206ENST00000567671 UBTFP17480 764 aaKnown RBP11.96□□□□□ -0.49
RAB11A-206ENST00000567671 KIF21BO75037 1637 aa11.96□□□□□ -0.5
RAB11A-206ENST00000567671 KIAA0586Q9BVV6 1533 aa11.93□□□□□ -0.5
RAB11A-206ENST00000567671 CEP170Q5SW79 1584 aa11.92□□□□□ -0.5
RAB11A-206ENST00000567671 JPH4Q96JJ6 628 aa11.89□□□□□ -0.51
RAB11A-206ENST00000567671 CLASP1Q7Z460 1538 aa11.89□□□□□ -0.51
RAB11A-206ENST00000567671 RNF216Q9NWF9 866 aaPredicted RBP11.87□□□□□ -0.51
RAB11A-206ENST00000567671 IQGAP2Q13576 1575 aa11.87□□□□□ -0.51
RAB11A-206ENST00000567671 TNIKQ9UKE5 1360 aa11.85□□□□□ -0.51
RAB11A-206ENST00000567671 RANGAP1P46060 587 aaPredicted RBP11.85□□□□□ -0.51
RAB11A-206ENST00000567671 CARMIL2Q6F5E8 1435 aa11.85□□□□□ -0.51
RAB11A-206ENST00000567671 PRG4Q92954 1404 aaPredicted RBP11.85□□□□□ -0.51
RAB11A-206ENST00000567671 LOC105371045A0A1W2PR82 267 aa11.84□□□□□ -0.51
RAB11A-206ENST00000567671 DNAJC5Q9H3Z4 198 aa11.84□□□□□ -0.51
RAB11A-206ENST00000567671 CTTNBP2Q8WZ74 1663 aa11.82□□□□□ -0.52
RAB11A-206ENST00000567671 UGGT2Q9NYU1 1516 aa11.81□□□□□ -0.52
RAB11A-206ENST00000567671 SHROOM2Q13796 1616 aa11.8□□□□□ -0.52
RAB11A-206ENST00000567671 ARHGEF11O15085 1522 aa11.79□□□□□ -0.52
RAB11A-206ENST00000567671 P3H3Q8IVL6 736 aa11.77□□□□□ -0.53
RAB11A-206ENST00000567671 TTBK1Q5TCY1 1321 aaPredicted RBP11.77□□□□□ -0.53
RAB11A-206ENST00000567671 CLIP1P30622 1438 aa11.77□□□□□ -0.53
RAB11A-206ENST00000567671 EFCAB5A4FU69 1503 aa11.76□□□□□ -0.53
RAB11A-206ENST00000567671 DISP1Q96F81 1524 aa11.76□□□□□ -0.53
RAB11A-206ENST00000567671 PTPRGP23470 1445 aa11.75□□□□□ -0.53
RAB11A-206ENST00000567671 CEP162Q5TB80 1403 aa11.75□□□□□ -0.53
RAB11A-206ENST00000567671 KIAA0556O60303 1618 aa11.75□□□□□ -0.53
RAB11A-206ENST00000567671 RIMBP3CA6NJZ7 1639 aa11.73□□□□□ -0.53
RAB11A-206ENST00000567671 RIMBP3BA6NNM3 1639 aa11.73□□□□□ -0.53
RAB11A-206ENST00000567671 ERCC6L2Q5T890 1561 aa11.73□□□□□ -0.53
RAB11A-206ENST00000567671 RIMBP3Q9UFD9 1639 aa11.73□□□□□ -0.53
RAB11A-206ENST00000567671 CYB5RLQ6IPT4 315 aa11.72□□□□□ -0.53
RAB11A-206ENST00000567671 SAMD9Q5K651 1589 aa11.71□□□□□ -0.53
RAB11A-206ENST00000567671 ARHGAP35Q9NRY4 1499 aa11.71□□□□□ -0.53
RAB11A-206ENST00000567671 FHOD3Q2V2M9 1422 aa11.71□□□□□ -0.53
RAB11A-206ENST00000567671 NCBP3Q53F19 620 aaKnown RBP11.71□□□□□ -0.53
RAB11A-206ENST00000567671 ARAP1Q96P48 1450 aa11.7□□□□□ -0.54
RAB11A-206ENST00000567671 FMN1Q68DA7 1419 aa11.69□□□□□ -0.54
RAB11A-206ENST00000567671 DCAF8L1A6NGE4 600 aa11.67□□□□□ -0.54
RAB11A-206ENST00000567671 UACAQ9BZF9 1416 aa11.67□□□□□ -0.54
RAB11A-206ENST00000567671 NPM3O75607 178 aaKnown RBP11.66□□□□□ -0.54
RAB11A-206ENST00000567671 NPM1P06748 294 aaKnown RBP eCLIP11.66□□□□□ -0.54
RAB11A-206ENST00000567671 ATP1B4Q9UN42 357 aaPredicted RBP11.65□□□□□ -0.54
RAB11A-206ENST00000567671 PLB1Q6P1J6 1458 aa11.63□□□□□ -0.55
RAB11A-206ENST00000567671 UHRF1BP1LA0JNW5 1464 aa11.62□□□□□ -0.55
RAB11A-206ENST00000567671 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.61□□□□□ -0.55
RAB11A-206ENST00000567671 HNRNPUL2Q1KMD3 747 aaKnown RBP11.61□□□□□ -0.55
RAB11A-206ENST00000567671 ABCC2Q92887 1545 aa11.6□□□□□ -0.55
RAB11A-206ENST00000567671 VPS8Q8N3P4 1428 aa11.6□□□□□ -0.55
RAB11A-206ENST00000567671 ABCA8O94911 1581 aa11.59□□□□□ -0.55
RAB11A-206ENST00000567671 CASKIN1Q8WXD9 1431 aa11.59□□□□□ -0.55
RAB11A-206ENST00000567671 RAPGEF6Q8TEU7 1601 aa11.58□□□□□ -0.56
RAB11A-206ENST00000567671 ARID3CA6NKF2 412 aa11.58□□□□□ -0.56
RAB11A-206ENST00000567671 RNF39Q9H2S5 420 aa11.58□□□□□ -0.56
RAB11A-206ENST00000567671 APLP2Q06481 763 aa11.57□□□□□ -0.56
RAB11A-206ENST00000567671 FYCO1Q9BQS8 1478 aa11.57□□□□□ -0.56
RAB11A-206ENST00000567671 HECW1Q76N89 1606 aa11.57□□□□□ -0.56
RAB11A-206ENST00000567671 CDK11AQ9UQ88 783 aaPredicted RBP11.56□□□□□ -0.56
RAB11A-206ENST00000567671 ADCY10Q96PN6 1610 aa11.56□□□□□ -0.56
RAB11A-206ENST00000567671 NUP153P49790 1475 aaKnown RBP11.55□□□□□ -0.56
RAB11A-206ENST00000567671 KDM5BQ9UGL1 1544 aa11.55□□□□□ -0.56
RAB11A-206ENST00000567671 PCF11O94913 1555 aaKnown RBP11.54□□□□□ -0.56
RAB11A-206ENST00000567671 CCDC18Q5T9S5 1454 aa11.54□□□□□ -0.56
RAB11A-206ENST00000567671 PLEKHD1A6NEE1 506 aa11.53□□□□□ -0.56
RAB11A-206ENST00000567671 ATP10BO94823 1461 aa11.52□□□□□ -0.56
RAB11A-206ENST00000567671 EPRSP07814 1512 aaKnown RBP11.52□□□□□ -0.57
RAB11A-206ENST00000567671 KCNA4P22459 653 aa11.52□□□□□ -0.57
RAB11A-206ENST00000567671 ASXL2Q76L83 1435 aa11.5□□□□□ -0.57
RAB11A-206ENST00000567671 MAPKBP1O60336 1514 aa11.49□□□□□ -0.57
RAB11A-206ENST00000567671 CDK13Q14004 1512 aaKnown RBP11.49□□□□□ -0.57
RAB11A-206ENST00000567671 ZCCHC11Q5TAX3 1644 aaKnown RBP11.49□□□□□ -0.57
RAB11A-206ENST00000567671 MTUS2Q5JR59 1369 aa11.48□□□□□ -0.57
RAB11A-206ENST00000567671 WDR7Q9Y4E6 1490 aa11.47□□□□□ -0.57
RAB11A-206ENST00000567671 KCNH8Q96L42 1107 aa11.46□□□□□ -0.57
RAB11A-206ENST00000567671 TRHP20396 242 aaPredicted RBP11.45□□□□□ -0.58
RAB11A-206ENST00000567671 CACNB1Q02641 598 aaPredicted RBP11.45□□□□□ -0.58
RAB11A-206ENST00000567671 MAP3K1Q13233 1512 aa11.45□□□□□ -0.58
RAB11A-206ENST00000567671 TROQ12816 1431 aaPredicted RBP11.44□□□□□ -0.58
RAB11A-206ENST00000567671 FAM69CQ0P6D2 419 aa11.44□□□□□ -0.58
RAB11A-206ENST00000567671 TIAM1Q13009 1591 aa11.43□□□□□ -0.58
RAB11A-206ENST00000567671 ABCC10Q5T3U5 1492 aa11.42□□□□□ -0.58
RAB11A-206ENST00000567671 EHBP1L1Q8N3D4 1523 aa11.41□□□□□ -0.58
RAB11A-206ENST00000567671 LRRC9Q6ZRR7 1453 aa11.4□□□□□ -0.58
RAB11A-206ENST00000567671 CFAP43Q8NDM7 1665 aa11.4□□□□□ -0.59
RAB11A-206ENST00000567671 KIF14Q15058 1648 aa11.38□□□□□ -0.59
RAB11A-206ENST00000567671 KANK4Q5T7N3 995 aaPredicted RBP11.38□□□□□ -0.59
RAB11A-206ENST00000567671 CCNB3Q8WWL7 1395 aa11.37□□□□□ -0.59
RAB11A-206ENST00000567671 LRRIQ1Q96JM4 1722 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms