RNA–Protein interactions for RNA: ENST00000567638.1

SCAMP2-209, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 678 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-209ENST00000567638 IGF1RP08069 1367 aa26.23■■□□□ 1.79
SCAMP2-209ENST00000567638 JPH4Q96JJ6 628 aa26.19■■□□□ 1.78
SCAMP2-209ENST00000567638 KIAA0586Q9BVV6 1533 aa26.14■■□□□ 1.78
SCAMP2-209ENST00000567638 CARMIL1Q5VZK9 1371 aa26.07■■□□□ 1.76
SCAMP2-209ENST00000567638 KIF13AQ9H1H9 1805 aa26.04■■□□□ 1.76
SCAMP2-209ENST00000567638 ADCY10Q96PN6 1610 aa26■■□□□ 1.75
SCAMP2-209ENST00000567638 IQGAP2Q13576 1575 aa25.97■■□□□ 1.75
SCAMP2-209ENST00000567638 MAPKBP1O60336 1514 aa25.92■■□□□ 1.74
SCAMP2-209ENST00000567638 RAPGEF2Q9Y4G8 1499 aa25.89■■□□□ 1.73
SCAMP2-209ENST00000567638 CARMIL2Q6F5E8 1435 aa25.87■■□□□ 1.73
SCAMP2-209ENST00000567638 NPM1P06748 294 aaKnown RBP eCLIP25.86■■□□□ 1.73
SCAMP2-209ENST00000567638 DIP2BQ9P265 1576 aa25.84■■□□□ 1.73
SCAMP2-209ENST00000567638 ABCC10Q5T3U5 1492 aa25.84■■□□□ 1.73
SCAMP2-209ENST00000567638 PTPRGP23470 1445 aa25.83■■□□□ 1.73
SCAMP2-209ENST00000567638 TNIKQ9UKE5 1360 aa25.82■■□□□ 1.72
SCAMP2-209ENST00000567638 CTTNBP2Q8WZ74 1663 aa25.81■■□□□ 1.72
SCAMP2-209ENST00000567638 DISP1Q96F81 1524 aa25.79■■□□□ 1.72
SCAMP2-209ENST00000567638 UGGT2Q9NYU1 1516 aa25.78■■□□□ 1.72
SCAMP2-209ENST00000567638 FAM69CQ0P6D2 419 aa25.74■■□□□ 1.71
SCAMP2-209ENST00000567638 KIAA0556O60303 1618 aa25.74■■□□□ 1.71
SCAMP2-209ENST00000567638 TTBK1Q5TCY1 1321 aaPredicted RBP25.73■■□□□ 1.71
SCAMP2-209ENST00000567638 ABCC2Q92887 1545 aa25.73■■□□□ 1.71
SCAMP2-209ENST00000567638 UHRF1BP1LA0JNW5 1464 aa25.7■■□□□ 1.7
SCAMP2-209ENST00000567638 TSPOAP1O95153 1857 aa25.68■■□□□ 1.7
SCAMP2-209ENST00000567638 PRXQ9BXM0 1461 aa25.66■■□□□ 1.7
SCAMP2-209ENST00000567638 UACAQ9BZF9 1416 aa25.66■■□□□ 1.7
SCAMP2-209ENST00000567638 ASXL2Q76L83 1435 aa25.6■■□□□ 1.69
SCAMP2-209ENST00000567638 PLB1Q6P1J6 1458 aa25.6■■□□□ 1.69
SCAMP2-209ENST00000567638 ZCCHC11Q5TAX3 1644 aaKnown RBP25.59■■□□□ 1.69
SCAMP2-209ENST00000567638 KDM5BQ9UGL1 1544 aa25.58■■□□□ 1.69
SCAMP2-209ENST00000567638 GOLGA3Q08378 1498 aa25.58■■□□□ 1.69
SCAMP2-209ENST00000567638 KDM6BO15054 1643 aa25.57■■□□□ 1.68
SCAMP2-209ENST00000567638 GLI2P10070 1586 aa25.56■■□□□ 1.68
SCAMP2-209ENST00000567638 PPRC1Q5VV67 1664 aaKnown RBP25.53■■□□□ 1.68
SCAMP2-209ENST00000567638 AEBP2Q6ZN18 517 aaPredicted RBP25.49■■□□□ 1.67
SCAMP2-209ENST00000567638 ABCA8O94911 1581 aa25.48■■□□□ 1.67
SCAMP2-209ENST00000567638 MAP3K4Q9Y6R4 1608 aa25.47■■□□□ 1.67
SCAMP2-209ENST00000567638 EPRSP07814 1512 aaKnown RBP25.47■■□□□ 1.67
SCAMP2-209ENST00000567638 CSRNP3Q8WYN3 585 aa25.44■■□□□ 1.66
SCAMP2-209ENST00000567638 EEA1Q15075 1411 aa25.43■■□□□ 1.66
SCAMP2-209ENST00000567638 WDR7Q9Y4E6 1490 aa25.4■■□□□ 1.66
SCAMP2-209ENST00000567638 SAMD9Q5K651 1589 aa25.39■■□□□ 1.65
SCAMP2-209ENST00000567638 TEX14Q8IWB6 1497 aa25.33■■□□□ 1.65
SCAMP2-209ENST00000567638 CFAP43Q8NDM7 1665 aa25.32■■□□□ 1.64
SCAMP2-209ENST00000567638 KIF21BO75037 1637 aa25.29■■□□□ 1.64
SCAMP2-209ENST00000567638 P3H3Q8IVL6 736 aa25.27■■□□□ 1.64
SCAMP2-209ENST00000567638 RAPGEF6Q8TEU7 1601 aa25.26■■□□□ 1.63
SCAMP2-209ENST00000567638 FAM9AQ8IZU1 332 aaPredicted RBP25.24■■□□□ 1.63
SCAMP2-209ENST00000567638 COL17A1Q9UMD9 1497 aaPredicted RBP25.23■■□□□ 1.63
SCAMP2-209ENST00000567638 MAGI3Q5TCQ9 1506 aa25.21■■□□□ 1.63
SCAMP2-209ENST00000567638 ATP10BO94823 1461 aa25.21■■□□□ 1.63
SCAMP2-209ENST00000567638 CD109Q6YHK3 1445 aa25.19■■□□□ 1.62
SCAMP2-209ENST00000567638 KCNH8Q96L42 1107 aa25.18■■□□□ 1.62
SCAMP2-209ENST00000567638 EFCAB5A4FU69 1503 aa25.15■■□□□ 1.62
SCAMP2-209ENST00000567638 FHOD3Q2V2M9 1422 aa25.14■■□□□ 1.62
SCAMP2-209ENST00000567638 ARID3CA6NKF2 412 aa25.14■■□□□ 1.62
SCAMP2-209ENST00000567638 ABCA9Q8IUA7 1624 aa25.13■■□□□ 1.61
SCAMP2-209ENST00000567638 KDM4FA0A1W2PPD8 638 aa25.13■■□□□ 1.61
SCAMP2-209ENST00000567638 NUP153P49790 1475 aaKnown RBP25.11■■□□□ 1.61
SCAMP2-209ENST00000567638 RANGAP1P46060 587 aaPredicted RBP25.11■■□□□ 1.61
SCAMP2-209ENST00000567638 CHIC1Q5VXU3 224 aa25.09■■□□□ 1.61
SCAMP2-209ENST00000567638 ADGRL1O94910 1474 aa25.04■■□□□ 1.6
SCAMP2-209ENST00000567638 ARAP3Q8WWN8 1544 aa25.01■■□□□ 1.59
SCAMP2-209ENST00000567638 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25■■□□□ 1.59
SCAMP2-209ENST00000567638 HNRNPUL2Q1KMD3 747 aaKnown RBP25■■□□□ 1.59
SCAMP2-209ENST00000567638 UBTFP17480 764 aaKnown RBP24.94■■□□□ 1.58
SCAMP2-209ENST00000567638 PHLDB1Q86UU1 1377 aa24.93■■□□□ 1.58
SCAMP2-209ENST00000567638 EHMT2Q96KQ7 1210 aa24.93■■□□□ 1.58
SCAMP2-209ENST00000567638 NEO1Q92859 1461 aa24.93■■□□□ 1.58
SCAMP2-209ENST00000567638 ARHGAP35Q9NRY4 1499 aa24.89■■□□□ 1.58
SCAMP2-209ENST00000567638 PLEKHD1A6NEE1 506 aa24.89■■□□□ 1.58
SCAMP2-209ENST00000567638 CDK13Q14004 1512 aaKnown RBP24.89■■□□□ 1.57
SCAMP2-209ENST00000567638 HECW1Q76N89 1606 aa24.89■■□□□ 1.57
SCAMP2-209ENST00000567638 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.87■■□□□ 1.57
SCAMP2-209ENST00000567638 TTC37Q6PGP7 1564 aa24.87■■□□□ 1.57
SCAMP2-209ENST00000567638 FMN1Q68DA7 1419 aa24.86■■□□□ 1.57
SCAMP2-209ENST00000567638 FRMPD1Q5SYB0 1578 aa24.86■■□□□ 1.57
SCAMP2-209ENST00000567638 CFAP74Q9C0B2 1584 aa24.86■■□□□ 1.57
SCAMP2-209ENST00000567638 RICTORQ6R327 1708 aa24.81■■□□□ 1.56
SCAMP2-209ENST00000567638 LRRIQ1Q96JM4 1722 aa24.79■■□□□ 1.56
SCAMP2-209ENST00000567638 FANCAO15360 1455 aa24.78■■□□□ 1.56
SCAMP2-209ENST00000567638 RAPGEF3O95398 923 aa24.78■■□□□ 1.56
SCAMP2-209ENST00000567638 AKNAQ7Z591 1439 aa24.75■■□□□ 1.55
SCAMP2-209ENST00000567638 MYO5CQ9NQX4 1742 aa24.75■■□□□ 1.55
SCAMP2-209ENST00000567638 DENND4BO75064 1496 aaPredicted RBP24.73■■□□□ 1.55
SCAMP2-209ENST00000567638 ARHGEF40Q8TER5 1519 aa24.72■■□□□ 1.55
SCAMP2-209ENST00000567638 ATP1B4Q9UN42 357 aaPredicted RBP24.72■■□□□ 1.55
SCAMP2-209ENST00000567638 ADAMTSL3P82987 1691 aa24.71■■□□□ 1.55
SCAMP2-209ENST00000567638 KIF14Q15058 1648 aa24.7■■□□□ 1.54
SCAMP2-209ENST00000567638 PCF11O94913 1555 aaKnown RBP24.68■■□□□ 1.54
SCAMP2-209ENST00000567638 HECW2Q9P2P5 1572 aa24.68■■□□□ 1.54
SCAMP2-209ENST00000567638 ZMYM4Q5VZL5 1548 aa24.68■■□□□ 1.54
SCAMP2-209ENST00000567638 BCORL1Q5H9F3 1711 aa24.68■■□□□ 1.54
SCAMP2-209ENST00000567638 PLCH2O75038 1416 aa24.67■■□□□ 1.54
SCAMP2-209ENST00000567638 CDK11AQ9UQ88 783 aaPredicted RBP24.66■■□□□ 1.54
SCAMP2-209ENST00000567638 TROQ12816 1431 aaPredicted RBP24.65■■□□□ 1.54
SCAMP2-209ENST00000567638 CLIP1P30622 1438 aa24.61■■□□□ 1.53
SCAMP2-209ENST00000567638 CASKIN1Q8WXD9 1431 aa24.61■■□□□ 1.53
SCAMP2-209ENST00000567638 ZFYVE16Q7Z3T8 1539 aa24.61■■□□□ 1.53
SCAMP2-209ENST00000567638 CCDC18Q5T9S5 1454 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms