RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 ARAP1Q96P48 1450 aa20.94■□□□□ 0.94
RNF40-211ENST00000567365 EEA1Q15075 1411 aa20.92■□□□□ 0.94
RNF40-211ENST00000567365 RAPGEF2Q9Y4G8 1499 aa20.92■□□□□ 0.94
RNF40-211ENST00000567365 KIAA0586Q9BVV6 1533 aa20.89■□□□□ 0.94
RNF40-211ENST00000567365 TRHP20396 242 aaPredicted RBP20.86■□□□□ 0.93
RNF40-211ENST00000567365 CSRNP3Q8WYN3 585 aa20.85■□□□□ 0.93
RNF40-211ENST00000567365 ERCC6L2Q5T890 1561 aa20.85■□□□□ 0.93
RNF40-211ENST00000567365 JPH4Q96JJ6 628 aa20.81■□□□□ 0.92
RNF40-211ENST00000567365 IQGAP2Q13576 1575 aa20.77■□□□□ 0.92
RNF40-211ENST00000567365 PRG4Q92954 1404 aaPredicted RBP20.77■□□□□ 0.91
RNF40-211ENST00000567365 CTTNBP2Q8WZ74 1663 aa20.73■□□□□ 0.91
RNF40-211ENST00000567365 KIF21BO75037 1637 aa20.73■□□□□ 0.91
RNF40-211ENST00000567365 FAM9AQ8IZU1 332 aaPredicted RBP20.71■□□□□ 0.91
RNF40-211ENST00000567365 UGGT2Q9NYU1 1516 aa20.71■□□□□ 0.91
RNF40-211ENST00000567365 DISP1Q96F81 1524 aa20.66■□□□□ 0.9
RNF40-211ENST00000567365 CARMIL2Q6F5E8 1435 aa20.6■□□□□ 0.89
RNF40-211ENST00000567365 KIAA0556O60303 1618 aa20.59■□□□□ 0.89
RNF40-211ENST00000567365 GOLGA3Q08378 1498 aa20.56■□□□□ 0.88
RNF40-211ENST00000567365 TNIKQ9UKE5 1360 aa20.55■□□□□ 0.88
RNF40-211ENST00000567365 SAMD9Q5K651 1589 aa20.52■□□□□ 0.88
RNF40-211ENST00000567365 PTPRGP23470 1445 aa20.52■□□□□ 0.87
RNF40-211ENST00000567365 ADCY10Q96PN6 1610 aa20.49■□□□□ 0.87
RNF40-211ENST00000567365 UHRF1BP1LA0JNW5 1464 aa20.43■□□□□ 0.86
RNF40-211ENST00000567365 UACAQ9BZF9 1416 aa20.41■□□□□ 0.86
RNF40-211ENST00000567365 EFCAB5A4FU69 1503 aa20.41■□□□□ 0.86
RNF40-211ENST00000567365 UBTFP17480 764 aaKnown RBP20.4■□□□□ 0.86
RNF40-211ENST00000567365 ABCC2Q92887 1545 aa20.4■□□□□ 0.86
RNF40-211ENST00000567365 ABCA8O94911 1581 aa20.39■□□□□ 0.85
RNF40-211ENST00000567365 EHMT2Q96KQ7 1210 aa20.37■□□□□ 0.85
RNF40-211ENST00000567365 PLB1Q6P1J6 1458 aa20.37■□□□□ 0.85
RNF40-211ENST00000567365 AEBP2Q6ZN18 517 aaPredicted RBP20.36■□□□□ 0.85
RNF40-211ENST00000567365 MAPKBP1O60336 1514 aa20.35■□□□□ 0.85
RNF40-211ENST00000567365 TTBK1Q5TCY1 1321 aaPredicted RBP20.34■□□□□ 0.85
RNF40-211ENST00000567365 KDM5BQ9UGL1 1544 aa20.34■□□□□ 0.85
RNF40-211ENST00000567365 ARHGAP35Q9NRY4 1499 aa20.34■□□□□ 0.85
RNF40-211ENST00000567365 P3H3Q8IVL6 736 aa20.33■□□□□ 0.85
RNF40-211ENST00000567365 FHOD3Q2V2M9 1422 aa20.33■□□□□ 0.84
RNF40-211ENST00000567365 RANGAP1P46060 587 aaPredicted RBP20.27■□□□□ 0.84
RNF40-211ENST00000567365 ZCCHC11Q5TAX3 1644 aaKnown RBP20.27■□□□□ 0.83
RNF40-211ENST00000567365 NPM1P06748 294 aaKnown RBP eCLIP20.26■□□□□ 0.83
RNF40-211ENST00000567365 RAPGEF6Q8TEU7 1601 aa20.25■□□□□ 0.83
RNF40-211ENST00000567365 KIF13AQ9H1H9 1805 aa20.23■□□□□ 0.83
RNF40-211ENST00000567365 ABCC10Q5T3U5 1492 aa20.23■□□□□ 0.83
RNF40-211ENST00000567365 DIP2BQ9P265 1576 aa20.21■□□□□ 0.83
RNF40-211ENST00000567365 NUP153P49790 1475 aaKnown RBP20.21■□□□□ 0.83
RNF40-211ENST00000567365 ASXL2Q76L83 1435 aa20.2■□□□□ 0.82
RNF40-211ENST00000567365 ATP10BO94823 1461 aa20.2■□□□□ 0.82
RNF40-211ENST00000567365 CLIP1P30622 1438 aa20.19■□□□□ 0.82
RNF40-211ENST00000567365 LOC105371045A0A1W2PR82 267 aa20.18■□□□□ 0.82
RNF40-211ENST00000567365 FMN1Q68DA7 1419 aa20.18■□□□□ 0.82
RNF40-211ENST00000567365 GLI2P10070 1586 aa20.13■□□□□ 0.81
RNF40-211ENST00000567365 CEP162Q5TB80 1403 aa20.13■□□□□ 0.81
RNF40-211ENST00000567365 WDR7Q9Y4E6 1490 aa20.12■□□□□ 0.81
RNF40-211ENST00000567365 EPRSP07814 1512 aaKnown RBP20.12■□□□□ 0.81
RNF40-211ENST00000567365 FAM69CQ0P6D2 419 aa20.1■□□□□ 0.81
RNF40-211ENST00000567365 HECW1Q76N89 1606 aa20.07■□□□□ 0.8
RNF40-211ENST00000567365 CASKIN1Q8WXD9 1431 aa20.07■□□□□ 0.8
RNF40-211ENST00000567365 PCF11O94913 1555 aaKnown RBP20.07■□□□□ 0.8
RNF40-211ENST00000567365 LRRIQ1Q96JM4 1722 aa20.07■□□□□ 0.8
RNF40-211ENST00000567365 ARID3CA6NKF2 412 aa20.05■□□□□ 0.8
RNF40-211ENST00000567365 CDK13Q14004 1512 aaKnown RBP20.04■□□□□ 0.8
RNF40-211ENST00000567365 MAP3K4Q9Y6R4 1608 aa20.04■□□□□ 0.8
RNF40-211ENST00000567365 FYCO1Q9BQS8 1478 aa20.02■□□□□ 0.8
RNF40-211ENST00000567365 PPRC1Q5VV67 1664 aaKnown RBP20.02■□□□□ 0.8
RNF40-211ENST00000567365 CFAP43Q8NDM7 1665 aa19.97■□□□□ 0.79
RNF40-211ENST00000567365 ABCA9Q8IUA7 1624 aa19.97■□□□□ 0.79
RNF40-211ENST00000567365 TSPOAP1O95153 1857 aa19.96■□□□□ 0.79
RNF40-211ENST00000567365 CCDC18Q5T9S5 1454 aa19.95■□□□□ 0.78
RNF40-211ENST00000567365 KCNH8Q96L42 1107 aa19.93■□□□□ 0.78
RNF40-211ENST00000567365 MAGI3Q5TCQ9 1506 aa19.92■□□□□ 0.78
RNF40-211ENST00000567365 PLEKHD1A6NEE1 506 aa19.92■□□□□ 0.78
RNF40-211ENST00000567365 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.92■□□□□ 0.78
RNF40-211ENST00000567365 HNRNPUL2Q1KMD3 747 aaKnown RBP19.92■□□□□ 0.78
RNF40-211ENST00000567365 KDM4FA0A1W2PPD8 638 aa19.91■□□□□ 0.78
RNF40-211ENST00000567365 CD109Q6YHK3 1445 aa19.91■□□□□ 0.78
RNF40-211ENST00000567365 ATP1B4Q9UN42 357 aaPredicted RBP19.9■□□□□ 0.78
RNF40-211ENST00000567365 TROQ12816 1431 aaPredicted RBP19.89■□□□□ 0.77
RNF40-211ENST00000567365 VPS8Q8N3P4 1428 aa19.89■□□□□ 0.77
RNF40-211ENST00000567365 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.89■□□□□ 0.77
RNF40-211ENST00000567365 TEX14Q8IWB6 1497 aa19.86■□□□□ 0.77
RNF40-211ENST00000567365 KIF14Q15058 1648 aa19.86■□□□□ 0.77
RNF40-211ENST00000567365 TTC37Q6PGP7 1564 aa19.86■□□□□ 0.77
RNF40-211ENST00000567365 CDK11AQ9UQ88 783 aaPredicted RBP19.85■□□□□ 0.77
RNF40-211ENST00000567365 KDM6BO15054 1643 aa19.84■□□□□ 0.77
RNF40-211ENST00000567365 COL17A1Q9UMD9 1497 aaPredicted RBP19.82■□□□□ 0.76
RNF40-211ENST00000567365 ARAP3Q8WWN8 1544 aa19.77■□□□□ 0.76
RNF40-211ENST00000567365 NEO1Q92859 1461 aa19.77■□□□□ 0.76
RNF40-211ENST00000567365 TIAM1Q13009 1591 aa19.77■□□□□ 0.76
RNF40-211ENST00000567365 PLCH2O75038 1416 aa19.76■□□□□ 0.75
RNF40-211ENST00000567365 MAP3K1Q13233 1512 aa19.76■□□□□ 0.75
RNF40-211ENST00000567365 PHLDB1Q86UU1 1377 aa19.75■□□□□ 0.75
RNF40-211ENST00000567365 MYO5CQ9NQX4 1742 aa19.74■□□□□ 0.75
RNF40-211ENST00000567365 EHBP1L1Q8N3D4 1523 aa19.73■□□□□ 0.75
RNF40-211ENST00000567365 FANCAO15360 1455 aa19.71■□□□□ 0.75
RNF40-211ENST00000567365 CFAP74Q9C0B2 1584 aa19.7■□□□□ 0.74
RNF40-211ENST00000567365 PREX2Q70Z35 1606 aa19.7■□□□□ 0.74
RNF40-211ENST00000567365 CDC42BPAQ5VT25 1732 aa19.7■□□□□ 0.74
RNF40-211ENST00000567365 CDC42BPBQ9Y5S2 1711 aa19.7■□□□□ 0.74
RNF40-211ENST00000567365 MTUS2Q5JR59 1369 aa19.7■□□□□ 0.74
RNF40-211ENST00000567365 LRRC9Q6ZRR7 1453 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms