RNA–Protein interactions for RNA: ENST00000567269.5

CDH16-206, Transcript of cadherin 16, humanhuman

TSL 2

Gene CDH16, Length 3,539 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16-206ENST00000567269 ARID3CA6NKF2 412 aa17.89■□□□□ 0.45
CDH16-206ENST00000567269 AQRO60306 1485 aaKnown RBP eCLIP17.89■□□□□ 0.45
CDH16-206ENST00000567269 CCNB3Q8WWL7 1395 aa17.88■□□□□ 0.45
CDH16-206ENST00000567269 ERCC6Q03468 1493 aa17.88■□□□□ 0.45
CDH16-206ENST00000567269 FBLN2P98095 1184 aa17.88■□□□□ 0.45
CDH16-206ENST00000567269 MYT1Q01538 1121 aa17.85■□□□□ 0.45
CDH16-206ENST00000567269 DIEXFQ68CQ4 756 aaKnown RBP17.83■□□□□ 0.45
CDH16-206ENST00000567269 MRC2Q9UBG0 1479 aa17.82■□□□□ 0.44
CDH16-206ENST00000567269 CUL7Q14999 1698 aa17.81■□□□□ 0.44
CDH16-206ENST00000567269 MTUS2Q5JR59 1369 aa17.79■□□□□ 0.44
CDH16-206ENST00000567269 LRRC9Q6ZRR7 1453 aa17.77■□□□□ 0.43
CDH16-206ENST00000567269 TIAM1Q13009 1591 aa17.76■□□□□ 0.43
CDH16-206ENST00000567269 FMN1Q68DA7 1419 aa17.76■□□□□ 0.43
CDH16-206ENST00000567269 ZNF316A6NFI3 1004 aaPredicted RBP17.76■□□□□ 0.43
CDH16-206ENST00000567269 RRBP1Q9P2E9 1410 aaKnown RBP17.76■□□□□ 0.43
CDH16-206ENST00000567269 PHLDB1Q86UU1 1377 aa17.76■□□□□ 0.43
CDH16-206ENST00000567269 PCF11O94913 1555 aaKnown RBP17.74■□□□□ 0.43
CDH16-206ENST00000567269 ABCA5Q8WWZ7 1642 aa17.73■□□□□ 0.43
CDH16-206ENST00000567269 CHMP7Q8WUX9 453 aaPredicted RBP17.73■□□□□ 0.43
CDH16-206ENST00000567269 ZNF608Q9ULD9 1512 aaPredicted RBP17.73■□□□□ 0.43
CDH16-206ENST00000567269 EFCAB5A4FU69 1503 aa17.71■□□□□ 0.43
CDH16-206ENST00000567269 CASKIN1Q8WXD9 1431 aa17.7■□□□□ 0.42
CDH16-206ENST00000567269 DHX57Q6P158 1386 aaKnown RBP17.69■□□□□ 0.42
CDH16-206ENST00000567269 WDR97A6NE52 1622 aa17.69■□□□□ 0.42
CDH16-206ENST00000567269 TARBP1Q13395 1621 aaKnown RBP17.69■□□□□ 0.42
CDH16-206ENST00000567269 GRIN2BQ13224 1484 aa17.69■□□□□ 0.42
CDH16-206ENST00000567269 CTTNBP2Q8WZ74 1663 aa17.68■□□□□ 0.42
CDH16-206ENST00000567269 FYCO1Q9BQS8 1478 aa17.67■□□□□ 0.42
CDH16-206ENST00000567269 IFT140Q96RY7 1462 aa17.66■□□□□ 0.42
CDH16-206ENST00000567269 RAB3GAP2Q9H2M9 1393 aa17.66■□□□□ 0.42
CDH16-206ENST00000567269 NEUROD1Q13562 356 aa17.66■□□□□ 0.42
CDH16-206ENST00000567269 MAP3K1Q13233 1512 aa17.64■□□□□ 0.41
CDH16-206ENST00000567269 SNAPC4Q5SXM2 1469 aa17.6■□□□□ 0.41
CDH16-206ENST00000567269 CHIC2Q9UKJ5 165 aa17.59■□□□□ 0.41
CDH16-206ENST00000567269 CLSPNQ9HAW4 1339 aa17.59■□□□□ 0.41
CDH16-206ENST00000567269 SETD5Q9C0A6 1442 aa17.59■□□□□ 0.41
CDH16-206ENST00000567269 PBRM1Q86U86 1689 aa17.57■□□□□ 0.4
CDH16-206ENST00000567269 YTHDC1Q96MU7 727 aaKnown RBP17.56■□□□□ 0.4
CDH16-206ENST00000567269 WDR62O43379 1518 aa17.56■□□□□ 0.4
CDH16-206ENST00000567269 IQGAP2Q13576 1575 aa17.55■□□□□ 0.4
CDH16-206ENST00000567269 SIN3AQ96ST3 1273 aa17.54■□□□□ 0.4
CDH16-206ENST00000567269 ADAMTS12P58397 1594 aa17.54■□□□□ 0.4
CDH16-206ENST00000567269 FGD6Q6ZV73 1430 aa17.52■□□□□ 0.4
CDH16-206ENST00000567269 CFAP43Q8NDM7 1665 aa17.52■□□□□ 0.4
CDH16-206ENST00000567269 RRP7BPQ9NSQ0 103 aa17.52■□□□□ 0.4
CDH16-206ENST00000567269 SAMD9Q5K651 1589 aa17.51■□□□□ 0.39
CDH16-206ENST00000567269 NCOA2Q15596 1464 aa17.5■□□□□ 0.39
CDH16-206ENST00000567269 CDK11AQ9UQ88 783 aaPredicted RBP17.49■□□□□ 0.39
CDH16-206ENST00000567269 TRIM52Q96A61 297 aa17.48■□□□□ 0.39
CDH16-206ENST00000567269 JPH4Q96JJ6 628 aa17.48■□□□□ 0.39
CDH16-206ENST00000567269 GRIN2AQ12879 1464 aa17.47■□□□□ 0.39
CDH16-206ENST00000567269 EIF4G3O43432 1585 aaKnown RBP17.47■□□□□ 0.39
CDH16-206ENST00000567269 KIAA0586Q9BVV6 1533 aa17.46■□□□□ 0.39
CDH16-206ENST00000567269 MIER1Q8N108 512 aa17.46■□□□□ 0.39
CDH16-206ENST00000567269 MYOM3Q5VTT5 1437 aa17.46■□□□□ 0.39
CDH16-206ENST00000567269 ZNF777Q9ULD5 760 aaPredicted RBP17.46■□□□□ 0.38
CDH16-206ENST00000567269 CDK13Q14004 1512 aaKnown RBP17.45■□□□□ 0.38
CDH16-206ENST00000567269 CENPBP07199 599 aaPredicted RBP17.43■□□□□ 0.38
CDH16-206ENST00000567269 EPRSP07814 1512 aaKnown RBP17.43■□□□□ 0.38
CDH16-206ENST00000567269 CCDC18Q5T9S5 1454 aa17.42■□□□□ 0.38
CDH16-206ENST00000567269 SCAF1Q9H7N4 1312 aaKnown RBP17.4■□□□□ 0.38
CDH16-206ENST00000567269 EHBP1L1Q8N3D4 1523 aa17.39■□□□□ 0.38
CDH16-206ENST00000567269 SYNJ2O15056 1496 aa17.39■□□□□ 0.37
CDH16-206ENST00000567269 MAGI1Q96QZ7 1491 aaPredicted RBP17.39■□□□□ 0.37
CDH16-206ENST00000567269 HECW1Q76N89 1606 aa17.39■□□□□ 0.37
CDH16-206ENST00000567269 THOC2Q8NI27 1593 aaKnown RBP17.38■□□□□ 0.37
CDH16-206ENST00000567269 CARMIL2Q6F5E8 1435 aa17.38■□□□□ 0.37
CDH16-206ENST00000567269 SUPT6HQ7KZ85 1726 aaKnown RBP17.37■□□□□ 0.37
CDH16-206ENST00000567269 PTPRKQ15262 1439 aa17.37■□□□□ 0.37
CDH16-206ENST00000567269 UGGT2Q9NYU1 1516 aa17.37■□□□□ 0.37
CDH16-206ENST00000567269 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.36■□□□□ 0.37
CDH16-206ENST00000567269 HIRIP3Q9BW71 556 aaPredicted RBP17.36■□□□□ 0.37
CDH16-206ENST00000567269 MAGI3Q5TCQ9 1506 aa17.36■□□□□ 0.37
CDH16-206ENST00000567269 ZNF644Q9H582 1327 aaPredicted RBP17.36■□□□□ 0.37
CDH16-206ENST00000567269 DISP1Q96F81 1524 aa17.35■□□□□ 0.37
CDH16-206ENST00000567269 CFDP1Q9UEE9 299 aaPredicted RBP17.35■□□□□ 0.37
CDH16-206ENST00000567269 LRRIQ1Q96JM4 1722 aa17.33■□□□□ 0.37
CDH16-206ENST00000567269 TONSLQ96HA7 1378 aa17.33■□□□□ 0.36
CDH16-206ENST00000567269 PLEKHD1A6NEE1 506 aa17.33■□□□□ 0.36
CDH16-206ENST00000567269 PLB1Q6P1J6 1458 aa17.33■□□□□ 0.36
CDH16-206ENST00000567269 MAPKBP1O60336 1514 aa17.32■□□□□ 0.36
CDH16-206ENST00000567269 KIAA0556O60303 1618 aa17.31■□□□□ 0.36
CDH16-206ENST00000567269 ACIN1Q9UKV3 1341 aaKnown RBP17.31■□□□□ 0.36
CDH16-206ENST00000567269 PRG4Q92954 1404 aaPredicted RBP17.29■□□□□ 0.36
CDH16-206ENST00000567269 PTPN23Q9H3S7 1636 aa17.29■□□□□ 0.36
CDH16-206ENST00000567269 HFM1A2PYH4 1435 aa17.29■□□□□ 0.36
CDH16-206ENST00000567269 CEP170Q5SW79 1584 aa17.29■□□□□ 0.36
CDH16-206ENST00000567269 NUP153P49790 1475 aaKnown RBP17.28■□□□□ 0.36
CDH16-206ENST00000567269 NAIPQ13075 1403 aa17.28■□□□□ 0.36
CDH16-206ENST00000567269 FOXD1Q16676 465 aa17.27■□□□□ 0.36
CDH16-206ENST00000567269 DDX10Q13206 875 aaKnown RBP17.24■□□□□ 0.35
CDH16-206ENST00000567269 UACAQ9BZF9 1416 aa17.24■□□□□ 0.35
CDH16-206ENST00000567269 PPP1R15AO75807 674 aaPredicted RBP17.23■□□□□ 0.35
CDH16-206ENST00000567269 RAPGEF6Q8TEU7 1601 aa17.23■□□□□ 0.35
CDH16-206ENST00000567269 NUP160Q12769 1436 aa17.22■□□□□ 0.35
CDH16-206ENST00000567269 PTPRGP23470 1445 aa17.22■□□□□ 0.35
CDH16-206ENST00000567269 MIA2Q96PC5 1412 aa17.22■□□□□ 0.35
CDH16-206ENST00000567269 MPHOSPH9Q99550 1183 aa17.2■□□□□ 0.34
CDH16-206ENST00000567269 SLC4A1APQ9BWU0 796 aaKnown RBP17.2■□□□□ 0.34
CDH16-206ENST00000567269 TIMELESSQ9UNS1 1208 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms