RNA–Protein interactions for RNA: ENST00000567019.1

EPB42-206, Transcript of erythrocyte membrane protein band 4.2, humanhuman

TSL 1 (best)

Gene EPB42, Length 1,628 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB42-206ENST00000567019 CLIP1P30622 1438 aa24.55■■□□□ 1.52
EPB42-206ENST00000567019 RANGAP1P46060 587 aaPredicted RBP24.53■■□□□ 1.52
EPB42-206ENST00000567019 CHD1O14646 1710 aa24.49■■□□□ 1.51
EPB42-206ENST00000567019 IQGAP2Q13576 1575 aa24.44■■□□□ 1.5
EPB42-206ENST00000567019 KIAA0586Q9BVV6 1533 aa24.44■■□□□ 1.5
EPB42-206ENST00000567019 CEP170Q5SW79 1584 aa24.43■■□□□ 1.5
EPB42-206ENST00000567019 NUP160Q12769 1436 aa24.42■■□□□ 1.5
EPB42-206ENST00000567019 EFCAB5A4FU69 1503 aa24.38■■□□□ 1.49
EPB42-206ENST00000567019 ARHGAP35Q9NRY4 1499 aa24.38■■□□□ 1.49
EPB42-206ENST00000567019 ARAP1Q96P48 1450 aa24.31■■□□□ 1.48
EPB42-206ENST00000567019 UGGT2Q9NYU1 1516 aa24.3■■□□□ 1.48
EPB42-206ENST00000567019 SAMD9Q5K651 1589 aa24.3■■□□□ 1.48
EPB42-206ENST00000567019 VPS8Q8N3P4 1428 aa24.28■■□□□ 1.48
EPB42-206ENST00000567019 P3H3Q8IVL6 736 aa24.27■■□□□ 1.48
EPB42-206ENST00000567019 JPH4Q96JJ6 628 aa24.24■■□□□ 1.47
EPB42-206ENST00000567019 FHOD3Q2V2M9 1422 aa24.22■■□□□ 1.47
EPB42-206ENST00000567019 CARMIL2Q6F5E8 1435 aa24.18■■□□□ 1.46
EPB42-206ENST00000567019 KIAA0556O60303 1618 aa24.18■■□□□ 1.46
EPB42-206ENST00000567019 CLASP1Q7Z460 1538 aa24.18■■□□□ 1.46
EPB42-206ENST00000567019 DISP1Q96F81 1524 aa24.18■■□□□ 1.46
EPB42-206ENST00000567019 OSCARQ8IYS5 282 aa24.16■■□□□ 1.46
EPB42-206ENST00000567019 FMN1Q68DA7 1419 aa24.16■■□□□ 1.46
EPB42-206ENST00000567019 SHROOM2Q13796 1616 aa24.15■■□□□ 1.46
EPB42-206ENST00000567019 PRG4Q92954 1404 aaPredicted RBP24.11■■□□□ 1.45
EPB42-206ENST00000567019 APLP2Q06481 763 aa24.11■■□□□ 1.45
EPB42-206ENST00000567019 CASKIN1Q8WXD9 1431 aa24.04■■□□□ 1.44
EPB42-206ENST00000567019 PCF11O94913 1555 aaKnown RBP24.04■■□□□ 1.44
EPB42-206ENST00000567019 FYCO1Q9BQS8 1478 aa24.04■■□□□ 1.44
EPB42-206ENST00000567019 TTBK1Q5TCY1 1321 aaPredicted RBP24.01■■□□□ 1.43
EPB42-206ENST00000567019 ATP1B4Q9UN42 357 aaPredicted RBP24.01■■□□□ 1.43
EPB42-206ENST00000567019 PTPRGP23470 1445 aa23.95■■□□□ 1.42
EPB42-206ENST00000567019 ERCC6L2Q5T890 1561 aa23.95■■□□□ 1.42
EPB42-206ENST00000567019 HECW1Q76N89 1606 aa23.94■■□□□ 1.42
EPB42-206ENST00000567019 MAP3K1Q13233 1512 aa23.94■■□□□ 1.42
EPB42-206ENST00000567019 PPARGC1BQ86YN6 1023 aaKnown RBP23.93■■□□□ 1.42
EPB42-206ENST00000567019 RAPGEF6Q8TEU7 1601 aa23.92■■□□□ 1.42
EPB42-206ENST00000567019 TIAM1Q13009 1591 aa23.9■■□□□ 1.42
EPB42-206ENST00000567019 CFAP43Q8NDM7 1665 aa23.89■■□□□ 1.41
EPB42-206ENST00000567019 CCDC18Q5T9S5 1454 aa23.87■■□□□ 1.41
EPB42-206ENST00000567019 PLB1Q6P1J6 1458 aa23.86■■□□□ 1.41
EPB42-206ENST00000567019 LRRIQ1Q96JM4 1722 aa23.86■■□□□ 1.41
EPB42-206ENST00000567019 ABCA8O94911 1581 aa23.84■■□□□ 1.41
EPB42-206ENST00000567019 EPRSP07814 1512 aaKnown RBP23.83■■□□□ 1.4
EPB42-206ENST00000567019 NUP153P49790 1475 aaKnown RBP23.81■■□□□ 1.4
EPB42-206ENST00000567019 KANK4Q5T7N3 995 aaPredicted RBP23.81■■□□□ 1.4
EPB42-206ENST00000567019 UACAQ9BZF9 1416 aa23.8■■□□□ 1.4
EPB42-206ENST00000567019 LRRC9Q6ZRR7 1453 aa23.79■■□□□ 1.4
EPB42-206ENST00000567019 CDK13Q14004 1512 aaKnown RBP23.75■■□□□ 1.39
EPB42-206ENST00000567019 ARID3CA6NKF2 412 aa23.75■■□□□ 1.39
EPB42-206ENST00000567019 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.74■■□□□ 1.39
EPB42-206ENST00000567019 TRIM26Q12899 539 aaPredicted RBP23.74■■□□□ 1.39
EPB42-206ENST00000567019 HNRNPUL2Q1KMD3 747 aaKnown RBP23.74■■□□□ 1.39
EPB42-206ENST00000567019 ABCC2Q92887 1545 aa23.73■■□□□ 1.39
EPB42-206ENST00000567019 MTUS2Q5JR59 1369 aa23.73■■□□□ 1.39
EPB42-206ENST00000567019 CDK11AQ9UQ88 783 aaPredicted RBP23.73■■□□□ 1.39
EPB42-206ENST00000567019 ARHGEF11O15085 1522 aa23.71■■□□□ 1.39
EPB42-206ENST00000567019 UHRF1BP1LA0JNW5 1464 aa23.7■■□□□ 1.39
EPB42-206ENST00000567019 EHBP1L1Q8N3D4 1523 aa23.69■■□□□ 1.38
EPB42-206ENST00000567019 ATP10BO94823 1461 aa23.67■■□□□ 1.38
EPB42-206ENST00000567019 MAGI3Q5TCQ9 1506 aa23.64■■□□□ 1.37
EPB42-206ENST00000567019 RIMBP3CA6NJZ7 1639 aa23.63■■□□□ 1.37
EPB42-206ENST00000567019 RIMBP3BA6NNM3 1639 aa23.63■■□□□ 1.37
EPB42-206ENST00000567019 RIMBP3Q9UFD9 1639 aa23.63■■□□□ 1.37
EPB42-206ENST00000567019 SUPT6HQ7KZ85 1726 aaKnown RBP23.63■■□□□ 1.37
EPB42-206ENST00000567019 PLEKHD1A6NEE1 506 aa23.62■■□□□ 1.37
EPB42-206ENST00000567019 ADCY10Q96PN6 1610 aa23.61■■□□□ 1.37
EPB42-206ENST00000567019 PCGF6Q9BYE7 350 aa23.59■■□□□ 1.37
EPB42-206ENST00000567019 KDM5BQ9UGL1 1544 aa23.58■■□□□ 1.37
EPB42-206ENST00000567019 TROQ12816 1431 aaPredicted RBP23.58■■□□□ 1.37
EPB42-206ENST00000567019 ZCCHC11Q5TAX3 1644 aaKnown RBP23.58■■□□□ 1.37
EPB42-206ENST00000567019 NCOA2Q15596 1464 aa23.55■■□□□ 1.36
EPB42-206ENST00000567019 PHLDB1Q86UU1 1377 aa23.52■■□□□ 1.36
EPB42-206ENST00000567019 NPM1P06748 294 aaKnown RBP eCLIP23.51■■□□□ 1.35
EPB42-206ENST00000567019 CYB5RLQ6IPT4 315 aa23.51■■□□□ 1.35
EPB42-206ENST00000567019 KIF14Q15058 1648 aa23.49■■□□□ 1.35
EPB42-206ENST00000567019 RRBP1Q9P2E9 1410 aaKnown RBP23.48■■□□□ 1.35
EPB42-206ENST00000567019 MYOM3Q5VTT5 1437 aa23.45■■□□□ 1.35
EPB42-206ENST00000567019 CCNB3Q8WWL7 1395 aa23.45■■□□□ 1.34
EPB42-206ENST00000567019 FGD6Q6ZV73 1430 aa23.41■■□□□ 1.34
EPB42-206ENST00000567019 ITSN2Q9NZM3 1697 aa23.39■■□□□ 1.33
EPB42-206ENST00000567019 WDR7Q9Y4E6 1490 aa23.39■■□□□ 1.33
EPB42-206ENST00000567019 KCNH8Q96L42 1107 aa23.38■■□□□ 1.33
EPB42-206ENST00000567019 MIA2Q96PC5 1412 aa23.37■■□□□ 1.33
EPB42-206ENST00000567019 ABCC10Q5T3U5 1492 aa23.36■■□□□ 1.33
EPB42-206ENST00000567019 ASXL2Q76L83 1435 aa23.36■■□□□ 1.33
EPB42-206ENST00000567019 FAM50AQ14320 339 aaKnown RBP23.36■■□□□ 1.33
EPB42-206ENST00000567019 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.34■■□□□ 1.33
EPB42-206ENST00000567019 GPATCH8Q9UKJ3 1502 aaKnown RBP23.33■■□□□ 1.33
EPB42-206ENST00000567019 PTPN23Q9H3S7 1636 aa23.33■■□□□ 1.33
EPB42-206ENST00000567019 CDC42BPAQ5VT25 1732 aa23.32■■□□□ 1.32
EPB42-206ENST00000567019 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.32■■□□□ 1.32
EPB42-206ENST00000567019 CFDP1Q9UEE9 299 aaPredicted RBP23.31■■□□□ 1.32
EPB42-206ENST00000567019 TTC37Q6PGP7 1564 aa23.29■■□□□ 1.32
EPB42-206ENST00000567019 MAPKBP1O60336 1514 aa23.29■■□□□ 1.32
EPB42-206ENST00000567019 MYO5CQ9NQX4 1742 aa23.28■■□□□ 1.32
EPB42-206ENST00000567019 TCOF1Q13428 1488 aaKnown RBP23.28■■□□□ 1.32
EPB42-206ENST00000567019 PREX2Q70Z35 1606 aa23.26■■□□□ 1.31
EPB42-206ENST00000567019 ITGAEP38570 1179 aa23.25■■□□□ 1.31
EPB42-206ENST00000567019 CDC42BPBQ9Y5S2 1711 aa23.23■■□□□ 1.31
EPB42-206ENST00000567019 ABCA9Q8IUA7 1624 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms