RNA–Protein interactions for RNA: ENST00000566915.5

LPCAT2-208, Transcript of lysophosphatidylcholine acyltransferase 2, humanhuman

TSL 1 (best)

Gene LPCAT2, Length 5,285 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT2-208ENST00000566915 TONSLQ96HA7 1378 aa5.92□□□□□ -1.46
LPCAT2-208ENST00000566915 DNMBPQ6XZF7 1577 aa5.92□□□□□ -1.46
LPCAT2-208ENST00000566915 TDRD9Q8NDG6 1382 aaKnown RBP5.91□□□□□ -1.46
LPCAT2-208ENST00000566915 CYB5RLQ6IPT4 315 aa5.9□□□□□ -1.46
LPCAT2-208ENST00000566915 GAPVD1Q14C86 1478 aa5.9□□□□□ -1.47
LPCAT2-208ENST00000566915 BCANQ96GW7 911 aa5.9□□□□□ -1.47
LPCAT2-208ENST00000566915 NEFMP07197 916 aa5.89□□□□□ -1.47
LPCAT2-208ENST00000566915 GLIPR1L2Q4G1C9 344 aa5.89□□□□□ -1.47
LPCAT2-208ENST00000566915 GOLGA3Q08378 1498 aa5.89□□□□□ -1.47
LPCAT2-208ENST00000566915 PLEKHD1A6NEE1 506 aa5.89□□□□□ -1.47
LPCAT2-208ENST00000566915 TOPBP1Q92547 1522 aa5.88□□□□□ -1.47
LPCAT2-208ENST00000566915 CARMIL1Q5VZK9 1371 aa5.88□□□□□ -1.47
LPCAT2-208ENST00000566915 DNAJC5Q9H3Z4 198 aa5.88□□□□□ -1.47
LPCAT2-208ENST00000566915 ANP32BQ92688 251 aaKnown RBP5.88□□□□□ -1.47
LPCAT2-208ENST00000566915 FGD5Q6ZNL6 1462 aa5.88□□□□□ -1.47
LPCAT2-208ENST00000566915 SYNJ1O43426 1573 aa5.87□□□□□ -1.47
LPCAT2-208ENST00000566915 FHAD1B1AJZ9 1412 aa5.87□□□□□ -1.47
LPCAT2-208ENST00000566915 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.87□□□□□ -1.47
LPCAT2-208ENST00000566915 UPF2Q9HAU5 1272 aaKnown RBP5.87□□□□□ -1.47
LPCAT2-208ENST00000566915 CANXP27824 592 aaKnown RBP5.87□□□□□ -1.47
LPCAT2-208ENST00000566915 MAGI1Q96QZ7 1491 aaPredicted RBP5.87□□□□□ -1.47
LPCAT2-208ENST00000566915 FKBP8Q14318 412 aa5.87□□□□□ -1.47
LPCAT2-208ENST00000566915 SLC4A1APQ9BWU0 796 aaKnown RBP5.87□□□□□ -1.47
LPCAT2-208ENST00000566915 WDR62O43379 1518 aa5.86□□□□□ -1.47
LPCAT2-208ENST00000566915 ANP32EQ9BTT0 268 aa5.86□□□□□ -1.47
LPCAT2-208ENST00000566915 CLIP1P30622 1438 aa5.85□□□□□ -1.47
LPCAT2-208ENST00000566915 JPH4Q96JJ6 628 aa5.84□□□□□ -1.47
LPCAT2-208ENST00000566915 ARID4BQ4LE39 1312 aaPredicted RBP5.84□□□□□ -1.47
LPCAT2-208ENST00000566915 TIMELESSQ9UNS1 1208 aa5.84□□□□□ -1.47
LPCAT2-208ENST00000566915 TNIKQ9UKE5 1360 aa5.84□□□□□ -1.47
LPCAT2-208ENST00000566915 CNGB1Q14028 1251 aaPredicted RBP5.84□□□□□ -1.47
LPCAT2-208ENST00000566915 WDR97A6NE52 1622 aa5.84□□□□□ -1.47
LPCAT2-208ENST00000566915 HNRNPUQ00839 825 aaKnown RBP eCLIP5.84□□□□□ -1.47
LPCAT2-208ENST00000566915 EIF5BO60841 1220 aaKnown RBP5.83□□□□□ -1.48
LPCAT2-208ENST00000566915 AQRO60306 1485 aaKnown RBP eCLIP5.83□□□□□ -1.48
LPCAT2-208ENST00000566915 SYNJ2O15056 1496 aa5.83□□□□□ -1.48
LPCAT2-208ENST00000566915 SCAF1Q9H7N4 1312 aaKnown RBP5.83□□□□□ -1.48
LPCAT2-208ENST00000566915 PTPRGP23470 1445 aa5.83□□□□□ -1.48
LPCAT2-208ENST00000566915 ZNF326Q5BKZ1 582 aaKnown RBP5.83□□□□□ -1.48
LPCAT2-208ENST00000566915 DDRGK1Q96HY6 314 aa5.82□□□□□ -1.48
LPCAT2-208ENST00000566915 SNAPC4Q5SXM2 1469 aa5.82□□□□□ -1.48
LPCAT2-208ENST00000566915 P3H3Q8IVL6 736 aa5.82□□□□□ -1.48
LPCAT2-208ENST00000566915 KCNH8Q96L42 1107 aa5.82□□□□□ -1.48
LPCAT2-208ENST00000566915 CCDC136Q96JN2 1154 aa5.82□□□□□ -1.48
LPCAT2-208ENST00000566915 POLA1P09884 1462 aaPredicted RBP5.81□□□□□ -1.48
LPCAT2-208ENST00000566915 CEP162Q5TB80 1403 aa5.81□□□□□ -1.48
LPCAT2-208ENST00000566915 RAPGEF2Q9Y4G8 1499 aa5.81□□□□□ -1.48
LPCAT2-208ENST00000566915 DDX10Q13206 875 aaKnown RBP5.81□□□□□ -1.48
LPCAT2-208ENST00000566915 RAD54L2Q9Y4B4 1467 aa5.8□□□□□ -1.48
LPCAT2-208ENST00000566915 TMC1Q8TDI8 760 aa5.8□□□□□ -1.48
LPCAT2-208ENST00000566915 URB2Q14146 1524 aaKnown RBP5.8□□□□□ -1.48
LPCAT2-208ENST00000566915 EIF4G2P78344 907 aaKnown RBP eCLIP5.79□□□□□ -1.48
LPCAT2-208ENST00000566915 ERICH6BQ5W0A0 696 aa5.79□□□□□ -1.48
LPCAT2-208ENST00000566915 FAM69CQ0P6D2 419 aa5.78□□□□□ -1.48
LPCAT2-208ENST00000566915 MIER1Q8N108 512 aa5.78□□□□□ -1.48
LPCAT2-208ENST00000566915 MTUS2Q5JR59 1369 aa5.78□□□□□ -1.48
LPCAT2-208ENST00000566915 ABCA10Q8WWZ4 1543 aa5.78□□□□□ -1.48
LPCAT2-208ENST00000566915 KIF21AQ7Z4S6 1674 aa5.78□□□□□ -1.48
LPCAT2-208ENST00000566915 ARID3CA6NKF2 412 aa5.78□□□□□ -1.48
LPCAT2-208ENST00000566915 PPM1GO15355 546 aaPredicted RBP5.77□□□□□ -1.49
LPCAT2-208ENST00000566915 SENP3Q9H4L4 574 aaPredicted RBP5.77□□□□□ -1.49
LPCAT2-208ENST00000566915 MRS2Q9HD23 443 aa5.77□□□□□ -1.49
LPCAT2-208ENST00000566915 ZNF777Q9ULD5 760 aaPredicted RBP5.77□□□□□ -1.49
LPCAT2-208ENST00000566915 PRG4Q92954 1404 aaPredicted RBP5.77□□□□□ -1.49
LPCAT2-208ENST00000566915 HSP90AA1P07900 732 aaKnown RBP5.77□□□□□ -1.49
LPCAT2-208ENST00000566915 BECN1Q14457 450 aa5.77□□□□□ -1.49
LPCAT2-208ENST00000566915 TSPY4P0CV99 314 aa5.77□□□□□ -1.49
LPCAT2-208ENST00000566915 TSPY10P0CW01 314 aa5.77□□□□□ -1.49
LPCAT2-208ENST00000566915 STAG3Q9UJ98 1225 aa5.77□□□□□ -1.49
LPCAT2-208ENST00000566915 SLC24A1O60721 1099 aa5.76□□□□□ -1.49
LPCAT2-208ENST00000566915 ERICH3Q5RHP9 1530 aa5.76□□□□□ -1.49
LPCAT2-208ENST00000566915 NPM2Q86SE8 214 aaKnown RBP5.76□□□□□ -1.49
LPCAT2-208ENST00000566915 FAM9BQ8IZU0 186 aa5.76□□□□□ -1.49
LPCAT2-208ENST00000566915 PRDM2Q13029 1718 aa5.75□□□□□ -1.49
LPCAT2-208ENST00000566915 WDR43Q15061 677 aaKnown RBP eCLIP5.75□□□□□ -1.49
LPCAT2-208ENST00000566915 EFCAB2Q5VUJ9 269 aa5.75□□□□□ -1.49
LPCAT2-208ENST00000566915 FMN1Q68DA7 1419 aa5.75□□□□□ -1.49
LPCAT2-208ENST00000566915 CDCA8Q53HL2 280 aa5.75□□□□□ -1.49
LPCAT2-208ENST00000566915 CCER2I3L3R5 266 aa5.75□□□□□ -1.49
LPCAT2-208ENST00000566915 THOC2Q8NI27 1593 aaKnown RBP5.74□□□□□ -1.49
LPCAT2-208ENST00000566915 PPP4R2Q9NY27 417 aa5.74□□□□□ -1.49
LPCAT2-208ENST00000566915 TOP2BQ02880 1626 aa5.74□□□□□ -1.49
LPCAT2-208ENST00000566915 GRIN2AQ12879 1464 aa5.74□□□□□ -1.49
LPCAT2-208ENST00000566915 KIAA0586Q9BVV6 1533 aa5.74□□□□□ -1.49
LPCAT2-208ENST00000566915 CUL7Q14999 1698 aa5.73□□□□□ -1.49
LPCAT2-208ENST00000566915 CUX1P39880 1505 aa5.73□□□□□ -1.49
LPCAT2-208ENST00000566915 POGZQ7Z3K3 1410 aa5.72□□□□□ -1.49
LPCAT2-208ENST00000566915 HDGFP51858 240 aaKnown RBP5.72□□□□□ -1.49
LPCAT2-208ENST00000566915 PLPPR3Q6T4P5 718 aa5.72□□□□□ -1.49
LPCAT2-208ENST00000566915 GOLGA6L22H0YM25 854 aa5.72□□□□□ -1.49
LPCAT2-208ENST00000566915 TEX14Q8IWB6 1497 aa5.72□□□□□ -1.49
LPCAT2-208ENST00000566915 CHMP4BQ9H444 224 aaKnown RBP5.71□□□□□ -1.49
LPCAT2-208ENST00000566915 PLB1Q6P1J6 1458 aa5.71□□□□□ -1.5
LPCAT2-208ENST00000566915 FOXD1Q16676 465 aa5.71□□□□□ -1.5
LPCAT2-208ENST00000566915 IGF1RP08069 1367 aa5.7□□□□□ -1.5
LPCAT2-208ENST00000566915 MYH16Q9H6N6 1097 aa5.7□□□□□ -1.5
LPCAT2-208ENST00000566915 CFDP1Q9UEE9 299 aaPredicted RBP5.7□□□□□ -1.5
LPCAT2-208ENST00000566915 ZNF608Q9ULD9 1512 aaPredicted RBP5.7□□□□□ -1.5
LPCAT2-208ENST00000566915 EIF4G3O43432 1585 aaKnown RBP5.7□□□□□ -1.5
LPCAT2-208ENST00000566915 CCNB3Q8WWL7 1395 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms