RNA–Protein interactions for RNA: ENST00000566889.5

FANCA-221, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-221ENST00000566889 SETD5Q9C0A6 1442 aa35.14■■■■□ 3.22
FANCA-221ENST00000566889 ERICH6Q7L0X2 663 aa35.12■■■■□ 3.21
FANCA-221ENST00000566889 TRIM52Q96A61 297 aa35.1■■■■□ 3.21
FANCA-221ENST00000566889 CDK11AQ9UQ88 783 aaPredicted RBP35.08■■■■□ 3.21
FANCA-221ENST00000566889 MAP3K1Q13233 1512 aa35.04■■■■□ 3.2
FANCA-221ENST00000566889 ARHGAP35Q9NRY4 1499 aa34.99■■■■□ 3.19
FANCA-221ENST00000566889 ERICH6BQ5W0A0 696 aa34.97■■■■□ 3.19
FANCA-221ENST00000566889 ATAD2BQ9ULI0 1458 aa34.95■■■■□ 3.18
FANCA-221ENST00000566889 SIN3AQ96ST3 1273 aa34.91■■■■□ 3.18
FANCA-221ENST00000566889 TIAM1Q13009 1591 aa34.9■■■■□ 3.18
FANCA-221ENST00000566889 KIF27Q86VH2 1401 aa34.86■■■■□ 3.17
FANCA-221ENST00000566889 BICRAQ9NZM4 1560 aa34.85■■■■□ 3.17
FANCA-221ENST00000566889 LRRC9Q6ZRR7 1453 aa34.76■■■■□ 3.15
FANCA-221ENST00000566889 PPP4R2Q9NY27 417 aa34.72■■■■□ 3.15
FANCA-221ENST00000566889 DEKP35659 375 aaKnown RBP34.71■■■■□ 3.15
FANCA-221ENST00000566889 HIRIP3Q9BW71 556 aaPredicted RBP34.7■■■■□ 3.15
FANCA-221ENST00000566889 HNRNPUQ00839 825 aaKnown RBP eCLIP34.69■■■■□ 3.14
FANCA-221ENST00000566889 PHLDB1Q86UU1 1377 aa34.68■■■■□ 3.14
FANCA-221ENST00000566889 CUX1P39880 1505 aa34.62■■■■□ 3.13
FANCA-221ENST00000566889 PRKCSHP14314 528 aaPredicted RBP34.61■■■■□ 3.13
FANCA-221ENST00000566889 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.6■■■■□ 3.13
FANCA-221ENST00000566889 PABPN1Q86U42 306 aaKnown RBP eCLIP34.6■■■■□ 3.132e-8■□□□□ 10
FANCA-221ENST00000566889 TONSLQ96HA7 1378 aa34.6■■■■□ 3.13
FANCA-221ENST00000566889 FAM50AQ14320 339 aaKnown RBP34.59■■■■□ 3.13
FANCA-221ENST00000566889 IRX6P78412 446 aaPredicted RBP34.58■■■■□ 3.13
FANCA-221ENST00000566889 CFAP43Q8NDM7 1665 aa34.58■■■■□ 3.13
FANCA-221ENST00000566889 FHAD1B1AJZ9 1412 aa34.53■■■■□ 3.12
FANCA-221ENST00000566889 NOP58Q9Y2X3 529 aaKnown RBP34.47■■■■□ 3.11
FANCA-221ENST00000566889 UACAQ9BZF9 1416 aa34.36■■■■□ 3.09
FANCA-221ENST00000566889 CCDC18Q5T9S5 1454 aa34.32■■■■□ 3.08
FANCA-221ENST00000566889 PCF11O94913 1555 aaKnown RBP34.32■■■■□ 3.08
FANCA-221ENST00000566889 IGF1RP08069 1367 aa34.32■■■■□ 3.08
FANCA-221ENST00000566889 NCOA2Q15596 1464 aa34.28■■■■□ 3.08
FANCA-221ENST00000566889 B4GALNT3Q6L9W6 998 aa34.28■■■■□ 3.08
FANCA-221ENST00000566889 ZBED9Q6R2W3 1325 aa34.27■■■■□ 3.08
FANCA-221ENST00000566889 KDM5BQ9UGL1 1544 aa34.27■■■■□ 3.08
FANCA-221ENST00000566889 HFM1A2PYH4 1435 aa34.25■■■■□ 3.07
FANCA-221ENST00000566889 WASHC2AQ641Q2 1341 aa34.24■■■■□ 3.07
FANCA-221ENST00000566889 CNTLNQ9NXG0 1405 aa34.23■■■■□ 3.07
FANCA-221ENST00000566889 FYCO1Q9BQS8 1478 aa34.23■■■■□ 3.07
FANCA-221ENST00000566889 NBR1Q14596 966 aa34.2■■■■□ 3.07
FANCA-221ENST00000566889 CARMIL1Q5VZK9 1371 aa34.2■■■■□ 3.07
FANCA-221ENST00000566889 PTPN23Q9H3S7 1636 aa34.19■■■■□ 3.06
FANCA-221ENST00000566889 PAK3O75914 559 aaPredicted RBP34.18■■■■□ 3.06
FANCA-221ENST00000566889 HMGXB3Q12766 1538 aa34.18■■■■□ 3.06
FANCA-221ENST00000566889 FGD6Q6ZV73 1430 aa34.18■■■■□ 3.06
FANCA-221ENST00000566889 AQRO60306 1485 aaKnown RBP eCLIP34.16■■■■□ 3.065e-10■■■□□ 18.1
FANCA-221ENST00000566889 CFTRP13569 1480 aa34.16■■■■□ 3.06
FANCA-221ENST00000566889 HSPA5P11021 654 aaKnown RBP34.14■■■■□ 3.06
FANCA-221ENST00000566889 ANP32AP39687 249 aaKnown RBP34.14■■■■□ 3.06
FANCA-221ENST00000566889 RTL5Q5HYW3 569 aaPredicted RBP34.13■■■■□ 3.05
FANCA-221ENST00000566889 IPO9Q96P70 1041 aaKnown RBP34.13■■■■□ 3.05
FANCA-221ENST00000566889 CASKIN1Q8WXD9 1431 aa34.13■■■■□ 3.05
FANCA-221ENST00000566889 FGD5Q6ZNL6 1462 aa34.09■■■■□ 3.05
FANCA-221ENST00000566889 EIF4G2P78344 907 aaKnown RBP eCLIP34.08■■■■□ 3.05
FANCA-221ENST00000566889 PRKRIP1Q9H875 184 aaPredicted RBP34.08■■■■□ 3.05
FANCA-221ENST00000566889 EFCAB5A4FU69 1503 aa34.06■■■■□ 3.04
FANCA-221ENST00000566889 CCDC184Q52MB2 194 aa34.06■■■■□ 3.04
FANCA-221ENST00000566889 NCAPD3P42695 1498 aa34.05■■■■□ 3.04
FANCA-221ENST00000566889 NAIPQ13075 1403 aa34.04■■■■□ 3.04
FANCA-221ENST00000566889 FAM9BQ8IZU0 186 aa34.02■■■■□ 3.04
FANCA-221ENST00000566889 MRS2Q9HD23 443 aa34.02■■■■□ 3.04
FANCA-221ENST00000566889 ZBTB47Q9UFB7 747 aaPredicted RBP34.02■■■■□ 3.04
FANCA-221ENST00000566889 FMN1Q68DA7 1419 aa34.01■■■■□ 3.04
FANCA-221ENST00000566889 PTPRKQ15262 1439 aa34■■■■□ 3.03
FANCA-221ENST00000566889 SMG6Q86US8 1419 aaKnown RBP34■■■■□ 3.03
FANCA-221ENST00000566889 ANO8Q9HCE9 1232 aaPredicted RBP34■■■■□ 3.03
FANCA-221ENST00000566889 ATP1B4Q9UN42 357 aaPredicted RBP33.99■■■■□ 3.03
FANCA-221ENST00000566889 NCOA1Q15788 1441 aa33.99■■■■□ 3.03
FANCA-221ENST00000566889 PRDM2Q13029 1718 aa33.99■■■■□ 3.03
FANCA-221ENST00000566889 CCDC7Q96M83 1385 aa33.95■■■■□ 3.03
FANCA-221ENST00000566889 FHOD3Q2V2M9 1422 aa33.95■■■■□ 3.02
FANCA-221ENST00000566889 RNF123Q5XPI4 1314 aa33.94■■■■□ 3.02
FANCA-221ENST00000566889 P3H3Q8IVL6 736 aa33.89■■■■□ 3.02
FANCA-221ENST00000566889 CCDC136Q96JN2 1154 aa33.89■■■■□ 3.02
FANCA-221ENST00000566889 HECW1Q76N89 1606 aa33.88■■■■□ 3.01
FANCA-221ENST00000566889 ABCA5Q8WWZ7 1642 aa33.85■■■■□ 3.01
FANCA-221ENST00000566889 NUDCQ9Y266 331 aa33.84■■■■□ 3.01
FANCA-221ENST00000566889 MTUS2Q5JR59 1369 aa33.83■■■■□ 3.01
FANCA-221ENST00000566889 MYOM3Q5VTT5 1437 aa33.82■■■■□ 3.01
FANCA-221ENST00000566889 USP35Q9P2H5 1018 aa33.81■■■■□ 3
FANCA-221ENST00000566889 SALL2Q9Y467 1007 aaPredicted RBP33.8■■■■□ 3
FANCA-221ENST00000566889 AKNAQ7Z591 1439 aa33.8■■■■□ 3
FANCA-221ENST00000566889 POLR1AO95602 1720 aaPredicted RBP33.79■■■■□ 3
FANCA-221ENST00000566889 SNAPC4Q5SXM2 1469 aa33.77■■■■□ 3
FANCA-221ENST00000566889 C11orf95C9JLR9 678 aaPredicted RBP33.77■■■■□ 3
FANCA-221ENST00000566889 GCC2Q8IWJ2 1684 aa33.76■■■■□ 3
FANCA-221ENST00000566889 DENND4BO75064 1496 aaPredicted RBP33.74■■■□□ 2.99
FANCA-221ENST00000566889 IL27Q8NEV9 243 aa33.71■■■□□ 2.99
FANCA-221ENST00000566889 SUPT6HQ7KZ85 1726 aaKnown RBP33.7■■■□□ 2.99
FANCA-221ENST00000566889 CTTNBP2Q8WZ74 1663 aa33.68■■■□□ 2.98
FANCA-221ENST00000566889 L3MBTL2Q969R5 705 aa33.66■■■□□ 2.98
FANCA-221ENST00000566889 THOC2Q8NI27 1593 aaKnown RBP33.65■■■□□ 2.98
FANCA-221ENST00000566889 KIF7Q2M1P5 1343 aa33.65■■■□□ 2.98
FANCA-221ENST00000566889 EHBP1L1Q8N3D4 1523 aa33.64■■■□□ 2.98
FANCA-221ENST00000566889 SPATA31E1Q6ZUB1 1445 aa33.64■■■□□ 2.98
FANCA-221ENST00000566889 CC2D2AQ9P2K1 1620 aa33.61■■■□□ 2.97
FANCA-221ENST00000566889 WASHC2CQ9Y4E1 1318 aa33.61■■■□□ 2.97
FANCA-221ENST00000566889 TCERG1O14776 1098 aaKnown RBP33.6■■■□□ 2.97
FANCA-221ENST00000566889 TCOF1Q13428 1488 aaKnown RBP33.6■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms