RNA–Protein interactions for RNA: ENST00000566682.1

SPG7-215, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 756 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-215ENST00000566682 CEP170Q5SW79 1584 aa23.07■■□□□ 1.28
SPG7-215ENST00000566682 NUP160Q12769 1436 aa23.07■■□□□ 1.28
SPG7-215ENST00000566682 CARMIL1Q5VZK9 1371 aa23.06■■□□□ 1.28
SPG7-215ENST00000566682 RIMBP3CA6NJZ7 1639 aa23.04■■□□□ 1.28
SPG7-215ENST00000566682 RIMBP3BA6NNM3 1639 aa23.04■■□□□ 1.28
SPG7-215ENST00000566682 RIMBP3Q9UFD9 1639 aa23.04■■□□□ 1.28
SPG7-215ENST00000566682 ARHGEF11O15085 1522 aa23.03■■□□□ 1.28
SPG7-215ENST00000566682 RAPGEF2Q9Y4G8 1499 aa22.92■■□□□ 1.26
SPG7-215ENST00000566682 SHROOM2Q13796 1616 aa22.9■■□□□ 1.26
SPG7-215ENST00000566682 CSRNP3Q8WYN3 585 aa22.89■■□□□ 1.25
SPG7-215ENST00000566682 EEA1Q15075 1411 aa22.88■■□□□ 1.25
SPG7-215ENST00000566682 KIAA0586Q9BVV6 1533 aa22.87■■□□□ 1.25
SPG7-215ENST00000566682 JPH4Q96JJ6 628 aa22.87■■□□□ 1.25
SPG7-215ENST00000566682 ARAP1Q96P48 1450 aa22.85■■□□□ 1.25
SPG7-215ENST00000566682 PRXQ9BXM0 1461 aa22.85■■□□□ 1.25
SPG7-215ENST00000566682 CYB5RLQ6IPT4 315 aa22.85■■□□□ 1.25
SPG7-215ENST00000566682 FAM9AQ8IZU1 332 aaPredicted RBP22.85■■□□□ 1.25
SPG7-215ENST00000566682 ERCC6L2Q5T890 1561 aa22.84■■□□□ 1.25
SPG7-215ENST00000566682 PRG4Q92954 1404 aaPredicted RBP22.8■■□□□ 1.24
SPG7-215ENST00000566682 IQGAP2Q13576 1575 aa22.76■■□□□ 1.23
SPG7-215ENST00000566682 CTTNBP2Q8WZ74 1663 aa22.73■■□□□ 1.23
SPG7-215ENST00000566682 KIF21BO75037 1637 aa22.65■■□□□ 1.22
SPG7-215ENST00000566682 UGGT2Q9NYU1 1516 aa22.63■■□□□ 1.21
SPG7-215ENST00000566682 CARMIL2Q6F5E8 1435 aa22.63■■□□□ 1.21
SPG7-215ENST00000566682 DISP1Q96F81 1524 aa22.6■■□□□ 1.21
SPG7-215ENST00000566682 EHMT2Q96KQ7 1210 aa22.56■■□□□ 1.2
SPG7-215ENST00000566682 TNIKQ9UKE5 1360 aa22.55■■□□□ 1.2
SPG7-215ENST00000566682 KIAA0556O60303 1618 aa22.54■■□□□ 1.2
SPG7-215ENST00000566682 TTBK1Q5TCY1 1321 aaPredicted RBP22.54■■□□□ 1.2
SPG7-215ENST00000566682 PTPRGP23470 1445 aa22.53■■□□□ 1.2
SPG7-215ENST00000566682 GOLGA3Q08378 1498 aa22.51■■□□□ 1.19
SPG7-215ENST00000566682 UBTFP17480 764 aaKnown RBP22.49■■□□□ 1.19
SPG7-215ENST00000566682 RANGAP1P46060 587 aaPredicted RBP22.44■■□□□ 1.18
SPG7-215ENST00000566682 ADCY10Q96PN6 1610 aa22.44■■□□□ 1.18
SPG7-215ENST00000566682 P3H3Q8IVL6 736 aa22.42■■□□□ 1.18
SPG7-215ENST00000566682 SAMD9Q5K651 1589 aa22.42■■□□□ 1.18
SPG7-215ENST00000566682 UACAQ9BZF9 1416 aa22.39■■□□□ 1.17
SPG7-215ENST00000566682 NPM1P06748 294 aaKnown RBP eCLIP22.38■■□□□ 1.17
SPG7-215ENST00000566682 TRHP20396 242 aaPredicted RBP22.36■■□□□ 1.17
SPG7-215ENST00000566682 UHRF1BP1LA0JNW5 1464 aa22.34■■□□□ 1.17
SPG7-215ENST00000566682 ABCC2Q92887 1545 aa22.33■■□□□ 1.17
SPG7-215ENST00000566682 PLB1Q6P1J6 1458 aa22.32■■□□□ 1.16
SPG7-215ENST00000566682 EFCAB5A4FU69 1503 aa22.31■■□□□ 1.16
SPG7-215ENST00000566682 ABCA8O94911 1581 aa22.29■■□□□ 1.16
SPG7-215ENST00000566682 FHOD3Q2V2M9 1422 aa22.29■■□□□ 1.16
SPG7-215ENST00000566682 MAPKBP1O60336 1514 aa22.26■■□□□ 1.15
SPG7-215ENST00000566682 KDM5BQ9UGL1 1544 aa22.25■■□□□ 1.15
SPG7-215ENST00000566682 ARHGAP35Q9NRY4 1499 aa22.24■■□□□ 1.15
SPG7-215ENST00000566682 ZCCHC11Q5TAX3 1644 aaKnown RBP22.22■■□□□ 1.15
SPG7-215ENST00000566682 RAPGEF6Q8TEU7 1601 aa22.2■■□□□ 1.14
SPG7-215ENST00000566682 KIF13AQ9H1H9 1805 aa22.2■■□□□ 1.14
SPG7-215ENST00000566682 LOC105371045A0A1W2PR82 267 aa22.18■■□□□ 1.14
SPG7-215ENST00000566682 ABCC10Q5T3U5 1492 aa22.17■■□□□ 1.14
SPG7-215ENST00000566682 ASXL2Q76L83 1435 aa22.17■■□□□ 1.14
SPG7-215ENST00000566682 FAM69CQ0P6D2 419 aa22.15■■□□□ 1.14
SPG7-215ENST00000566682 DIP2BQ9P265 1576 aa22.14■■□□□ 1.13
SPG7-215ENST00000566682 ARID3CA6NKF2 412 aa22.14■■□□□ 1.13
SPG7-215ENST00000566682 ATP10BO94823 1461 aa22.12■■□□□ 1.13
SPG7-215ENST00000566682 CLIP1P30622 1438 aa22.12■■□□□ 1.13
SPG7-215ENST00000566682 FMN1Q68DA7 1419 aa22.12■■□□□ 1.13
SPG7-215ENST00000566682 NUP153P49790 1475 aaKnown RBP22.1■■□□□ 1.13
SPG7-215ENST00000566682 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.06■■□□□ 1.12
SPG7-215ENST00000566682 HNRNPUL2Q1KMD3 747 aaKnown RBP22.06■■□□□ 1.12
SPG7-215ENST00000566682 WDR7Q9Y4E6 1490 aa22.06■■□□□ 1.12
SPG7-215ENST00000566682 ATP1B4Q9UN42 357 aaPredicted RBP22.04■■□□□ 1.12
SPG7-215ENST00000566682 EPRSP07814 1512 aaKnown RBP22.04■■□□□ 1.12
SPG7-215ENST00000566682 CEP162Q5TB80 1403 aa22.04■■□□□ 1.12
SPG7-215ENST00000566682 GLI2P10070 1586 aa22.03■■□□□ 1.12
SPG7-215ENST00000566682 KCNH8Q96L42 1107 aa22.01■■□□□ 1.11
SPG7-215ENST00000566682 HECW1Q76N89 1606 aa22.01■■□□□ 1.11
SPG7-215ENST00000566682 TSPOAP1O95153 1857 aa22■■□□□ 1.11
SPG7-215ENST00000566682 CDK13Q14004 1512 aaKnown RBP21.96■■□□□ 1.11
SPG7-215ENST00000566682 CASKIN1Q8WXD9 1431 aa21.96■■□□□ 1.11
SPG7-215ENST00000566682 PCF11O94913 1555 aaKnown RBP21.95■■□□□ 1.11
SPG7-215ENST00000566682 LRRIQ1Q96JM4 1722 aa21.95■■□□□ 1.1
SPG7-215ENST00000566682 PLEKHD1A6NEE1 506 aa21.95■■□□□ 1.1
SPG7-215ENST00000566682 MAP3K4Q9Y6R4 1608 aa21.95■■□□□ 1.1
SPG7-215ENST00000566682 PPRC1Q5VV67 1664 aaKnown RBP21.91■■□□□ 1.1
SPG7-215ENST00000566682 CFAP43Q8NDM7 1665 aa21.9■■□□□ 1.1
SPG7-215ENST00000566682 FYCO1Q9BQS8 1478 aa21.9■■□□□ 1.1
SPG7-215ENST00000566682 CD109Q6YHK3 1445 aa21.87■■□□□ 1.09
SPG7-215ENST00000566682 CDK11AQ9UQ88 783 aaPredicted RBP21.86■■□□□ 1.09
SPG7-215ENST00000566682 ABCA9Q8IUA7 1624 aa21.86■■□□□ 1.09
SPG7-215ENST00000566682 CCDC18Q5T9S5 1454 aa21.85■■□□□ 1.09
SPG7-215ENST00000566682 TEX14Q8IWB6 1497 aa21.81■■□□□ 1.08
SPG7-215ENST00000566682 MAGI3Q5TCQ9 1506 aa21.8■■□□□ 1.08
SPG7-215ENST00000566682 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.79■■□□□ 1.08
SPG7-215ENST00000566682 TROQ12816 1431 aaPredicted RBP21.78■■□□□ 1.08
SPG7-215ENST00000566682 KDM6BO15054 1643 aa21.77■■□□□ 1.08
SPG7-215ENST00000566682 VPS8Q8N3P4 1428 aa21.77■■□□□ 1.08
SPG7-215ENST00000566682 TTC37Q6PGP7 1564 aa21.74■■□□□ 1.07
SPG7-215ENST00000566682 KIF14Q15058 1648 aa21.74■■□□□ 1.07
SPG7-215ENST00000566682 COL17A1Q9UMD9 1497 aaPredicted RBP21.7■■□□□ 1.06
SPG7-215ENST00000566682 MYO5CQ9NQX4 1742 aa21.66■■□□□ 1.06
SPG7-215ENST00000566682 NEO1Q92859 1461 aa21.65■■□□□ 1.06
SPG7-215ENST00000566682 PLCH2O75038 1416 aa21.65■■□□□ 1.06
SPG7-215ENST00000566682 MTUS2Q5JR59 1369 aa21.65■■□□□ 1.06
SPG7-215ENST00000566682 PHLDB1Q86UU1 1377 aa21.64■■□□□ 1.06
SPG7-215ENST00000566682 TIAM1Q13009 1591 aa21.63■■□□□ 1.05
SPG7-215ENST00000566682 FANCAO15360 1455 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms