RNA–Protein interactions for RNA: ENST00000566583.5

SNHG20-204, Transcript of small nucleolar RNA host gene 20, humanhuman

TSL 1 (best) BASIC

Gene SNHG20, Length 1,338 nt, Biotype sense overlapping, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG20-204ENST00000566583 KIAA0586Q9BVV6 1533 aa25.32■■□□□ 1.64
SNHG20-204ENST00000566583 IQGAP2Q13576 1575 aa25.29■■□□□ 1.64
SNHG20-204ENST00000566583 TNIKQ9UKE5 1360 aa25.28■■□□□ 1.64
SNHG20-204ENST00000566583 EHMT2Q96KQ7 1210 aa25.27■■□□□ 1.64
SNHG20-204ENST00000566583 SHROOM2Q13796 1616 aa25.26■■□□□ 1.63
SNHG20-204ENST00000566583 OSCARQ8IYS5 282 aa25.24■■□□□ 1.63
SNHG20-204ENST00000566583 UBTFP17480 764 aaKnown RBP25.23■■□□□ 1.63
SNHG20-204ENST00000566583 UGGT2Q9NYU1 1516 aa25.19■■□□□ 1.62
SNHG20-204ENST00000566583 SAMD9Q5K651 1589 aa25.13■■□□□ 1.61
SNHG20-204ENST00000566583 JPH4Q96JJ6 628 aa25.1■■□□□ 1.61
SNHG20-204ENST00000566583 DISP1Q96F81 1524 aa25.08■■□□□ 1.61
SNHG20-204ENST00000566583 CEP162Q5TB80 1403 aa25.06■■□□□ 1.6
SNHG20-204ENST00000566583 EFCAB5A4FU69 1503 aa25.06■■□□□ 1.6
SNHG20-204ENST00000566583 KIAA0556O60303 1618 aa25.06■■□□□ 1.6
SNHG20-204ENST00000566583 ARHGAP35Q9NRY4 1499 aa25.05■■□□□ 1.6
SNHG20-204ENST00000566583 ERCC6L2Q5T890 1561 aa25.04■■□□□ 1.6
SNHG20-204ENST00000566583 PRG4Q92954 1404 aaPredicted RBP25.02■■□□□ 1.6
SNHG20-204ENST00000566583 CLIP1P30622 1438 aa25.01■■□□□ 1.59
SNHG20-204ENST00000566583 CARMIL2Q6F5E8 1435 aa24.94■■□□□ 1.58
SNHG20-204ENST00000566583 ARHGEF11O15085 1522 aa24.93■■□□□ 1.58
SNHG20-204ENST00000566583 ARAP1Q96P48 1450 aa24.93■■□□□ 1.58
SNHG20-204ENST00000566583 RANGAP1P46060 587 aaPredicted RBP24.92■■□□□ 1.58
SNHG20-204ENST00000566583 RIMBP3CA6NJZ7 1639 aa24.91■■□□□ 1.58
SNHG20-204ENST00000566583 RIMBP3BA6NNM3 1639 aa24.91■■□□□ 1.58
SNHG20-204ENST00000566583 RIMBP3Q9UFD9 1639 aa24.91■■□□□ 1.58
SNHG20-204ENST00000566583 FHOD3Q2V2M9 1422 aa24.89■■□□□ 1.58
SNHG20-204ENST00000566583 P3H3Q8IVL6 736 aa24.85■■□□□ 1.57
SNHG20-204ENST00000566583 PTPRGP23470 1445 aa24.77■■□□□ 1.56
SNHG20-204ENST00000566583 ABCA8O94911 1581 aa24.76■■□□□ 1.55
SNHG20-204ENST00000566583 FMN1Q68DA7 1419 aa24.75■■□□□ 1.55
SNHG20-204ENST00000566583 DNAJC5Q9H3Z4 198 aa24.75■■□□□ 1.55
SNHG20-204ENST00000566583 VPS8Q8N3P4 1428 aa24.74■■□□□ 1.55
SNHG20-204ENST00000566583 RAPGEF6Q8TEU7 1601 aa24.73■■□□□ 1.55
SNHG20-204ENST00000566583 PCF11O94913 1555 aaKnown RBP24.72■■□□□ 1.55
SNHG20-204ENST00000566583 LRRIQ1Q96JM4 1722 aa24.7■■□□□ 1.54
SNHG20-204ENST00000566583 PLB1Q6P1J6 1458 aa24.7■■□□□ 1.54
SNHG20-204ENST00000566583 CASKIN1Q8WXD9 1431 aa24.68■■□□□ 1.54
SNHG20-204ENST00000566583 UHRF1BP1LA0JNW5 1464 aa24.67■■□□□ 1.54
SNHG20-204ENST00000566583 ADCY10Q96PN6 1610 aa24.66■■□□□ 1.54
SNHG20-204ENST00000566583 ABCC2Q92887 1545 aa24.66■■□□□ 1.54
SNHG20-204ENST00000566583 UACAQ9BZF9 1416 aa24.66■■□□□ 1.54
SNHG20-204ENST00000566583 FYCO1Q9BQS8 1478 aa24.65■■□□□ 1.54
SNHG20-204ENST00000566583 HECW1Q76N89 1606 aa24.64■■□□□ 1.53
SNHG20-204ENST00000566583 TTBK1Q5TCY1 1321 aaPredicted RBP24.62■■□□□ 1.53
SNHG20-204ENST00000566583 NUP153P49790 1475 aaKnown RBP24.62■■□□□ 1.53
SNHG20-204ENST00000566583 KDM5BQ9UGL1 1544 aa24.55■■□□□ 1.52
SNHG20-204ENST00000566583 CYB5RLQ6IPT4 315 aa24.54■■□□□ 1.52
SNHG20-204ENST00000566583 CFAP43Q8NDM7 1665 aa24.54■■□□□ 1.52
SNHG20-204ENST00000566583 ZCCHC11Q5TAX3 1644 aaKnown RBP24.53■■□□□ 1.52
SNHG20-204ENST00000566583 EPRSP07814 1512 aaKnown RBP24.53■■□□□ 1.52
SNHG20-204ENST00000566583 ATP10BO94823 1461 aa24.51■■□□□ 1.51
SNHG20-204ENST00000566583 MAP3K1Q13233 1512 aa24.51■■□□□ 1.51
SNHG20-204ENST00000566583 CDK13Q14004 1512 aaKnown RBP24.5■■□□□ 1.51
SNHG20-204ENST00000566583 CCDC18Q5T9S5 1454 aa24.5■■□□□ 1.51
SNHG20-204ENST00000566583 TIAM1Q13009 1591 aa24.48■■□□□ 1.51
SNHG20-204ENST00000566583 ATP1B4Q9UN42 357 aaPredicted RBP24.4■■□□□ 1.5
SNHG20-204ENST00000566583 MAGI3Q5TCQ9 1506 aa24.4■■□□□ 1.5
SNHG20-204ENST00000566583 MAPKBP1O60336 1514 aa24.37■■□□□ 1.49
SNHG20-204ENST00000566583 ARID3CA6NKF2 412 aa24.36■■□□□ 1.49
SNHG20-204ENST00000566583 LRRC9Q6ZRR7 1453 aa24.33■■□□□ 1.49
SNHG20-204ENST00000566583 EHBP1L1Q8N3D4 1523 aa24.3■■□□□ 1.48
SNHG20-204ENST00000566583 TROQ12816 1431 aaPredicted RBP24.3■■□□□ 1.48
SNHG20-204ENST00000566583 ASXL2Q76L83 1435 aa24.3■■□□□ 1.48
SNHG20-204ENST00000566583 KANK4Q5T7N3 995 aaPredicted RBP24.29■■□□□ 1.48
SNHG20-204ENST00000566583 WDR7Q9Y4E6 1490 aa24.28■■□□□ 1.48
SNHG20-204ENST00000566583 NPM1P06748 294 aaKnown RBP eCLIP24.28■■□□□ 1.48
SNHG20-204ENST00000566583 APLP2Q06481 763 aa24.27■■□□□ 1.48
SNHG20-204ENST00000566583 KIF14Q15058 1648 aa24.25■■□□□ 1.47
SNHG20-204ENST00000566583 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.25■■□□□ 1.47
SNHG20-204ENST00000566583 HNRNPUL2Q1KMD3 747 aaKnown RBP24.25■■□□□ 1.47
SNHG20-204ENST00000566583 CDK11AQ9UQ88 783 aaPredicted RBP24.25■■□□□ 1.47
SNHG20-204ENST00000566583 PLEKHD1A6NEE1 506 aa24.24■■□□□ 1.47
SNHG20-204ENST00000566583 SUPT6HQ7KZ85 1726 aaKnown RBP24.23■■□□□ 1.47
SNHG20-204ENST00000566583 MTUS2Q5JR59 1369 aa24.23■■□□□ 1.47
SNHG20-204ENST00000566583 KIF13AQ9H1H9 1805 aa24.19■■□□□ 1.46
SNHG20-204ENST00000566583 ABCC10Q5T3U5 1492 aa24.18■■□□□ 1.46
SNHG20-204ENST00000566583 ABCA9Q8IUA7 1624 aa24.18■■□□□ 1.46
SNHG20-204ENST00000566583 DIP2BQ9P265 1576 aa24.17■■□□□ 1.46
SNHG20-204ENST00000566583 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.17■■□□□ 1.46
SNHG20-204ENST00000566583 GLI2P10070 1586 aa24.16■■□□□ 1.46
SNHG20-204ENST00000566583 TTC37Q6PGP7 1564 aa24.16■■□□□ 1.46
SNHG20-204ENST00000566583 NCOA2Q15596 1464 aa24.15■■□□□ 1.46
SNHG20-204ENST00000566583 CDC42BPAQ5VT25 1732 aa24.14■■□□□ 1.45
SNHG20-204ENST00000566583 PPARGC1BQ86YN6 1023 aaKnown RBP24.1■■□□□ 1.45
SNHG20-204ENST00000566583 MAP3K4Q9Y6R4 1608 aa24.1■■□□□ 1.45
SNHG20-204ENST00000566583 MYO5CQ9NQX4 1742 aa24.09■■□□□ 1.45
SNHG20-204ENST00000566583 CDC42BPBQ9Y5S2 1711 aa24.08■■□□□ 1.45
SNHG20-204ENST00000566583 KCNH8Q96L42 1107 aa24.08■■□□□ 1.44
SNHG20-204ENST00000566583 PREX2Q70Z35 1606 aa24.07■■□□□ 1.44
SNHG20-204ENST00000566583 ITSN2Q9NZM3 1697 aa24.07■■□□□ 1.44
SNHG20-204ENST00000566583 PHLDB1Q86UU1 1377 aa24.05■■□□□ 1.44
SNHG20-204ENST00000566583 GPATCH8Q9UKJ3 1502 aaKnown RBP24.05■■□□□ 1.44
SNHG20-204ENST00000566583 ARAP3Q8WWN8 1544 aa24.02■■□□□ 1.44
SNHG20-204ENST00000566583 PPRC1Q5VV67 1664 aaKnown RBP24.02■■□□□ 1.44
SNHG20-204ENST00000566583 MYOM3Q5VTT5 1437 aa24■■□□□ 1.43
SNHG20-204ENST00000566583 PLCH2O75038 1416 aa23.99■■□□□ 1.43
SNHG20-204ENST00000566583 CCNB3Q8WWL7 1395 aa23.98■■□□□ 1.43
SNHG20-204ENST00000566583 FAM69CQ0P6D2 419 aa23.96■■□□□ 1.43
SNHG20-204ENST00000566583 TSPOAP1O95153 1857 aa23.96■■□□□ 1.43
SNHG20-204ENST00000566583 CD109Q6YHK3 1445 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms