RNA–Protein interactions for RNA: ENST00000566547.1

GGA2-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 2

Gene GGA2, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-206ENST00000566547 KIF27Q86VH2 1401 aa38.94■■■■□ 3.82
GGA2-206ENST00000566547 CUL7Q14999 1698 aa38.85■■■■□ 3.81
GGA2-206ENST00000566547 KIAA0586Q9BVV6 1533 aa38.74■■■■□ 3.79
GGA2-206ENST00000566547 CARMIL1Q5VZK9 1371 aa38.69■■■■□ 3.78
GGA2-206ENST00000566547 KIF13AQ9H1H9 1805 aa38.63■■■■□ 3.78
GGA2-206ENST00000566547 ADCY10Q96PN6 1610 aa38.59■■■■□ 3.77
GGA2-206ENST00000566547 NPM1P06748 294 aaKnown RBP eCLIP38.5■■■■□ 3.75
GGA2-206ENST00000566547 TTBK1Q5TCY1 1321 aaPredicted RBP38.48■■■■□ 3.75
GGA2-206ENST00000566547 IQGAP2Q13576 1575 aa38.43■■■■□ 3.74
GGA2-206ENST00000566547 MAPKBP1O60336 1514 aa38.43■■■■□ 3.74
GGA2-206ENST00000566547 FAM69CQ0P6D2 419 aa38.42■■■■□ 3.74
GGA2-206ENST00000566547 ABCC10Q5T3U5 1492 aa38.41■■■■□ 3.74
GGA2-206ENST00000566547 PTPRGP23470 1445 aa38.39■■■■□ 3.74
GGA2-206ENST00000566547 DIP2BQ9P265 1576 aa38.36■■■■□ 3.73
GGA2-206ENST00000566547 CARMIL2Q6F5E8 1435 aa38.35■■■■□ 3.73
GGA2-206ENST00000566547 RAPGEF2Q9Y4G8 1499 aa38.34■■■■□ 3.73
GGA2-206ENST00000566547 TNIKQ9UKE5 1360 aa38.31■■■■□ 3.72
GGA2-206ENST00000566547 DISP1Q96F81 1524 aa38.26■■■■□ 3.72
GGA2-206ENST00000566547 AEBP2Q6ZN18 517 aaPredicted RBP38.24■■■■□ 3.71
GGA2-206ENST00000566547 TSPOAP1O95153 1857 aa38.18■■■■□ 3.7
GGA2-206ENST00000566547 ABCC2Q92887 1545 aa38.17■■■■□ 3.7
GGA2-206ENST00000566547 UGGT2Q9NYU1 1516 aa38.16■■■■□ 3.7
GGA2-206ENST00000566547 UACAQ9BZF9 1416 aa38.1■■■■□ 3.69
GGA2-206ENST00000566547 KIAA0556O60303 1618 aa38.09■■■■□ 3.69
GGA2-206ENST00000566547 UHRF1BP1LA0JNW5 1464 aa38.08■■■■□ 3.69
GGA2-206ENST00000566547 CTTNBP2Q8WZ74 1663 aa38.07■■■■□ 3.68
GGA2-206ENST00000566547 ASXL2Q76L83 1435 aa38.06■■■■□ 3.68
GGA2-206ENST00000566547 KDM6BO15054 1643 aa38■■■■□ 3.67
GGA2-206ENST00000566547 PLB1Q6P1J6 1458 aa37.97■■■■□ 3.67
GGA2-206ENST00000566547 PRXQ9BXM0 1461 aa37.96■■■■□ 3.67
GGA2-206ENST00000566547 KDM5BQ9UGL1 1544 aa37.93■■■■□ 3.66
GGA2-206ENST00000566547 ZCCHC11Q5TAX3 1644 aaKnown RBP37.93■■■■□ 3.66
GGA2-206ENST00000566547 GLI2P10070 1586 aa37.89■■■■□ 3.66
GGA2-206ENST00000566547 PPRC1Q5VV67 1664 aaKnown RBP37.88■■■■□ 3.66
GGA2-206ENST00000566547 GOLGA3Q08378 1498 aa37.83■■■■□ 3.65
GGA2-206ENST00000566547 EPRSP07814 1512 aaKnown RBP37.82■■■■□ 3.65
GGA2-206ENST00000566547 MAP3K4Q9Y6R4 1608 aa37.73■■■■□ 3.63
GGA2-206ENST00000566547 ABCA8O94911 1581 aa37.72■■■■□ 3.63
GGA2-206ENST00000566547 CSRNP3Q8WYN3 585 aa37.71■■■■□ 3.63
GGA2-206ENST00000566547 P3H3Q8IVL6 736 aa37.68■■■■□ 3.62
GGA2-206ENST00000566547 WDR7Q9Y4E6 1490 aa37.68■■■■□ 3.62
GGA2-206ENST00000566547 COL17A1Q9UMD9 1497 aaPredicted RBP37.62■■■■□ 3.61
GGA2-206ENST00000566547 KDM4FA0A1W2PPD8 638 aa37.6■■■■□ 3.61
GGA2-206ENST00000566547 KCNH8Q96L42 1107 aa37.58■■■■□ 3.61
GGA2-206ENST00000566547 ARID3CA6NKF2 412 aa37.57■■■■□ 3.6
GGA2-206ENST00000566547 TEX14Q8IWB6 1497 aa37.55■■■■□ 3.6
GGA2-206ENST00000566547 FAM9AQ8IZU1 332 aaPredicted RBP37.54■■■■□ 3.6
GGA2-206ENST00000566547 SAMD9Q5K651 1589 aa37.51■■■■□ 3.59
GGA2-206ENST00000566547 EEA1Q15075 1411 aa37.48■■■■□ 3.59
GGA2-206ENST00000566547 RANGAP1P46060 587 aaPredicted RBP37.48■■■■□ 3.59
GGA2-206ENST00000566547 CD109Q6YHK3 1445 aa37.45■■■■□ 3.59
GGA2-206ENST00000566547 CFAP43Q8NDM7 1665 aa37.45■■■■□ 3.59
GGA2-206ENST00000566547 ATP10BO94823 1461 aa37.42■■■■□ 3.58
GGA2-206ENST00000566547 MAGI3Q5TCQ9 1506 aa37.37■■■■□ 3.57
GGA2-206ENST00000566547 RAPGEF6Q8TEU7 1601 aa37.36■■■■□ 3.57
GGA2-206ENST00000566547 ADGRL1O94910 1474 aa37.32■■■■□ 3.56
GGA2-206ENST00000566547 FHOD3Q2V2M9 1422 aa37.31■■■■□ 3.56
GGA2-206ENST00000566547 KIF21BO75037 1637 aa37.26■■■■□ 3.56
GGA2-206ENST00000566547 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.24■■■■□ 3.55
GGA2-206ENST00000566547 HNRNPUL2Q1KMD3 747 aaKnown RBP37.24■■■■□ 3.55
GGA2-206ENST00000566547 EHMT2Q96KQ7 1210 aa37.23■■■■□ 3.55
GGA2-206ENST00000566547 NUP153P49790 1475 aaKnown RBP37.22■■■■□ 3.55
GGA2-206ENST00000566547 ABCA9Q8IUA7 1624 aa37.19■■■■□ 3.54
GGA2-206ENST00000566547 CHIC1Q5VXU3 224 aa37.15■■■■□ 3.54
GGA2-206ENST00000566547 EFCAB5A4FU69 1503 aa37.1■■■■□ 3.53
GGA2-206ENST00000566547 ARAP3Q8WWN8 1544 aa37.09■■■■□ 3.53
GGA2-206ENST00000566547 UBTFP17480 764 aaKnown RBP37.02■■■■□ 3.52
GGA2-206ENST00000566547 PLEKHD1A6NEE1 506 aa36.97■■■■□ 3.51
GGA2-206ENST00000566547 RAPGEF3O95398 923 aa36.97■■■■□ 3.51
GGA2-206ENST00000566547 NEO1Q92859 1461 aa36.94■■■■□ 3.5
GGA2-206ENST00000566547 PHLDB1Q86UU1 1377 aa36.93■■■■□ 3.5
GGA2-206ENST00000566547 CDK13Q14004 1512 aaKnown RBP36.93■■■■□ 3.5
GGA2-206ENST00000566547 FRMPD1Q5SYB0 1578 aa36.87■■■■□ 3.49
GGA2-206ENST00000566547 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.87■■■■□ 3.49
GGA2-206ENST00000566547 ARHGAP35Q9NRY4 1499 aa36.86■■■■□ 3.49
GGA2-206ENST00000566547 TTC37Q6PGP7 1564 aa36.86■■■■□ 3.49
GGA2-206ENST00000566547 ATP1B4Q9UN42 357 aaPredicted RBP36.84■■■■□ 3.49
GGA2-206ENST00000566547 HECW2Q9P2P5 1572 aa36.78■■■■□ 3.48
GGA2-206ENST00000566547 AKNAQ7Z591 1439 aa36.76■■■■□ 3.48
GGA2-206ENST00000566547 FANCAO15360 1455 aa36.76■■■■□ 3.48
GGA2-206ENST00000566547 FMN1Q68DA7 1419 aa36.76■■■■□ 3.47
GGA2-206ENST00000566547 HECW1Q76N89 1606 aa36.75■■■■□ 3.47
GGA2-206ENST00000566547 RICTORQ6R327 1708 aa36.73■■■■□ 3.47
GGA2-206ENST00000566547 DENND4BO75064 1496 aaPredicted RBP36.72■■■■□ 3.47
GGA2-206ENST00000566547 CFAP74Q9C0B2 1584 aa36.71■■■■□ 3.47
GGA2-206ENST00000566547 ADAMTSL3P82987 1691 aa36.67■■■■□ 3.46
GGA2-206ENST00000566547 ARID4BQ4LE39 1312 aaPredicted RBP36.64■■■■□ 3.46
GGA2-206ENST00000566547 ARHGEF40Q8TER5 1519 aa36.64■■■■□ 3.46
GGA2-206ENST00000566547 LRRIQ1Q96JM4 1722 aa36.63■■■■□ 3.45
GGA2-206ENST00000566547 BCORL1Q5H9F3 1711 aa36.62■■■■□ 3.45
GGA2-206ENST00000566547 KIF14Q15058 1648 aa36.59■■■■□ 3.45
GGA2-206ENST00000566547 PLCH2O75038 1416 aa36.59■■■■□ 3.45
GGA2-206ENST00000566547 PTPRMP28827 1452 aa36.57■■■■□ 3.45
GGA2-206ENST00000566547 MADDQ8WXG6 1647 aa36.56■■■■□ 3.44
GGA2-206ENST00000566547 MYO5CQ9NQX4 1742 aa36.55■■■■□ 3.44
GGA2-206ENST00000566547 CDK11AQ9UQ88 783 aaPredicted RBP36.54■■■■□ 3.44
GGA2-206ENST00000566547 ZMYM4Q5VZL5 1548 aa36.53■■■■□ 3.44
GGA2-206ENST00000566547 SCAPERQ9BY12 1400 aa36.52■■■■□ 3.44
GGA2-206ENST00000566547 YEATS2Q9ULM3 1422 aa36.52■■■■□ 3.44
GGA2-206ENST00000566547 TROQ12816 1431 aaPredicted RBP36.51■■■■□ 3.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms