RNA–Protein interactions for RNA: ENST00000566296.1

TSR3-202, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

TSL 3

Gene TSR3, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-202ENST00000566296 CUL7Q14999 1698 aa28.98■■■□□ 2.23
TSR3-202ENST00000566296 IGF1RP08069 1367 aa28.9■■■□□ 2.22
TSR3-202ENST00000566296 KIF13AQ9H1H9 1805 aa28.9■■■□□ 2.22
TSR3-202ENST00000566296 KIAA0586Q9BVV6 1533 aa28.89■■■□□ 2.22
TSR3-202ENST00000566296 AEBP2Q6ZN18 517 aaPredicted RBP28.84■■■□□ 2.21
TSR3-202ENST00000566296 NPM1P06748 294 aaKnown RBP eCLIP28.82■■■□□ 2.2
TSR3-202ENST00000566296 MAPKBP1O60336 1514 aa28.79■■■□□ 2.2
TSR3-202ENST00000566296 ADCY10Q96PN6 1610 aa28.79■■■□□ 2.2
TSR3-202ENST00000566296 ABCC10Q5T3U5 1492 aa28.75■■■□□ 2.19
TSR3-202ENST00000566296 CARMIL1Q5VZK9 1371 aa28.75■■■□□ 2.19
TSR3-202ENST00000566296 DIP2BQ9P265 1576 aa28.71■■■□□ 2.19
TSR3-202ENST00000566296 FAM69CQ0P6D2 419 aa28.7■■■□□ 2.18
TSR3-202ENST00000566296 CARMIL2Q6F5E8 1435 aa28.65■■■□□ 2.18
TSR3-202ENST00000566296 IQGAP2Q13576 1575 aa28.64■■■□□ 2.18
TSR3-202ENST00000566296 PTPRGP23470 1445 aa28.63■■■□□ 2.17
TSR3-202ENST00000566296 TNIKQ9UKE5 1360 aa28.59■■■□□ 2.17
TSR3-202ENST00000566296 TTBK1Q5TCY1 1321 aaPredicted RBP28.56■■■□□ 2.16
TSR3-202ENST00000566296 TSPOAP1O95153 1857 aa28.52■■■□□ 2.16
TSR3-202ENST00000566296 ABCC2Q92887 1545 aa28.52■■■□□ 2.16
TSR3-202ENST00000566296 RAPGEF2Q9Y4G8 1499 aa28.51■■■□□ 2.15
TSR3-202ENST00000566296 KDM6BO15054 1643 aa28.51■■■□□ 2.15
TSR3-202ENST00000566296 DISP1Q96F81 1524 aa28.45■■■□□ 2.15
TSR3-202ENST00000566296 UHRF1BP1LA0JNW5 1464 aa28.45■■■□□ 2.14
TSR3-202ENST00000566296 UGGT2Q9NYU1 1516 aa28.43■■■□□ 2.14
TSR3-202ENST00000566296 UACAQ9BZF9 1416 aa28.43■■■□□ 2.14
TSR3-202ENST00000566296 PLB1Q6P1J6 1458 aa28.42■■■□□ 2.14
TSR3-202ENST00000566296 ASXL2Q76L83 1435 aa28.41■■■□□ 2.14
TSR3-202ENST00000566296 KIAA0556O60303 1618 aa28.39■■■□□ 2.13
TSR3-202ENST00000566296 GLI2P10070 1586 aa28.37■■■□□ 2.13
TSR3-202ENST00000566296 CTTNBP2Q8WZ74 1663 aa28.34■■■□□ 2.13
TSR3-202ENST00000566296 KDM5BQ9UGL1 1544 aa28.32■■■□□ 2.12
TSR3-202ENST00000566296 PPRC1Q5VV67 1664 aaKnown RBP28.29■■■□□ 2.12
TSR3-202ENST00000566296 ZCCHC11Q5TAX3 1644 aaKnown RBP28.29■■■□□ 2.12
TSR3-202ENST00000566296 EPRSP07814 1512 aaKnown RBP28.24■■■□□ 2.11
TSR3-202ENST00000566296 GOLGA3Q08378 1498 aa28.23■■■□□ 2.11
TSR3-202ENST00000566296 MAP3K4Q9Y6R4 1608 aa28.21■■■□□ 2.11
TSR3-202ENST00000566296 TEX14Q8IWB6 1497 aa28.17■■■□□ 2.1
TSR3-202ENST00000566296 PRXQ9BXM0 1461 aa28.17■■■□□ 2.1
TSR3-202ENST00000566296 WDR7Q9Y4E6 1490 aa28.15■■■□□ 2.1
TSR3-202ENST00000566296 KDM4FA0A1W2PPD8 638 aa28.12■■■□□ 2.09
TSR3-202ENST00000566296 ABCA8O94911 1581 aa28.11■■■□□ 2.09
TSR3-202ENST00000566296 COL17A1Q9UMD9 1497 aaPredicted RBP28.03■■■□□ 2.08
TSR3-202ENST00000566296 CFAP43Q8NDM7 1665 aa28.02■■■□□ 2.08
TSR3-202ENST00000566296 FAM9AQ8IZU1 332 aaPredicted RBP27.99■■■□□ 2.07
TSR3-202ENST00000566296 ADGRL1O94910 1474 aa27.98■■■□□ 2.07
TSR3-202ENST00000566296 CD109Q6YHK3 1445 aa27.96■■■□□ 2.07
TSR3-202ENST00000566296 MAGI3Q5TCQ9 1506 aa27.96■■■□□ 2.07
TSR3-202ENST00000566296 KCNH8Q96L42 1107 aa27.93■■■□□ 2.06
TSR3-202ENST00000566296 CSRNP3Q8WYN3 585 aa27.9■■■□□ 2.06
TSR3-202ENST00000566296 SAMD9Q5K651 1589 aa27.89■■■□□ 2.05
TSR3-202ENST00000566296 P3H3Q8IVL6 736 aa27.88■■■□□ 2.05
TSR3-202ENST00000566296 EEA1Q15075 1411 aa27.85■■■□□ 2.05
TSR3-202ENST00000566296 ARID3CA6NKF2 412 aa27.84■■■□□ 2.05
TSR3-202ENST00000566296 ATP10BO94823 1461 aa27.83■■■□□ 2.05
TSR3-202ENST00000566296 RAPGEF6Q8TEU7 1601 aa27.81■■■□□ 2.04
TSR3-202ENST00000566296 ABCA9Q8IUA7 1624 aa27.76■■■□□ 2.03
TSR3-202ENST00000566296 ARAP3Q8WWN8 1544 aa27.72■■■□□ 2.03
TSR3-202ENST00000566296 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.69■■■□□ 2.02
TSR3-202ENST00000566296 HNRNPUL2Q1KMD3 747 aaKnown RBP27.69■■■□□ 2.02
TSR3-202ENST00000566296 KIF21BO75037 1637 aa27.69■■■□□ 2.02
TSR3-202ENST00000566296 FHOD3Q2V2M9 1422 aa27.68■■■□□ 2.02
TSR3-202ENST00000566296 PHLDB1Q86UU1 1377 aa27.68■■■□□ 2.02
TSR3-202ENST00000566296 RANGAP1P46060 587 aaPredicted RBP27.67■■■□□ 2.02
TSR3-202ENST00000566296 NUP153P49790 1475 aaKnown RBP27.67■■■□□ 2.02
TSR3-202ENST00000566296 EFCAB5A4FU69 1503 aa27.63■■■□□ 2.01
TSR3-202ENST00000566296 HECW2Q9P2P5 1572 aa27.63■■■□□ 2.01
TSR3-202ENST00000566296 NEO1Q92859 1461 aa27.63■■■□□ 2.01
TSR3-202ENST00000566296 PLEKHD1A6NEE1 506 aa27.52■■■□□ 2
TSR3-202ENST00000566296 RAPGEF3O95398 923 aa27.51■■□□□ 1.99
TSR3-202ENST00000566296 FRMPD1Q5SYB0 1578 aa27.51■■□□□ 1.99
TSR3-202ENST00000566296 CFAP74Q9C0B2 1584 aa27.49■■□□□ 1.99
TSR3-202ENST00000566296 ADAMTSL3P82987 1691 aa27.44■■□□□ 1.98
TSR3-202ENST00000566296 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.44■■□□□ 1.986e-6■■■■□ 21.5
TSR3-202ENST00000566296 ARHGEF40Q8TER5 1519 aa27.43■■□□□ 1.98
TSR3-202ENST00000566296 FANCAO15360 1455 aa27.43■■□□□ 1.98
TSR3-202ENST00000566296 DENND4BO75064 1496 aaPredicted RBP27.43■■□□□ 1.98
TSR3-202ENST00000566296 TTC37Q6PGP7 1564 aa27.42■■□□□ 1.98
TSR3-202ENST00000566296 RICTORQ6R327 1708 aa27.41■■□□□ 1.98
TSR3-202ENST00000566296 CDK13Q14004 1512 aaKnown RBP27.41■■□□□ 1.98
TSR3-202ENST00000566296 AKNAQ7Z591 1439 aa27.41■■□□□ 1.98
TSR3-202ENST00000566296 BCORL1Q5H9F3 1711 aa27.4■■□□□ 1.98
TSR3-202ENST00000566296 UBTFP17480 764 aaKnown RBP27.39■■□□□ 1.98
TSR3-202ENST00000566296 PTPRMP28827 1452 aa27.38■■□□□ 1.97
TSR3-202ENST00000566296 ARID4BQ4LE39 1312 aaPredicted RBP27.38■■□□□ 1.97
TSR3-202ENST00000566296 HECW1Q76N89 1606 aa27.38■■□□□ 1.97
TSR3-202ENST00000566296 ILDR1Q86SU0 546 aaPredicted RBP27.37■■□□□ 1.97
TSR3-202ENST00000566296 FMN1Q68DA7 1419 aa27.36■■□□□ 1.97
TSR3-202ENST00000566296 EHMT2Q96KQ7 1210 aa27.35■■□□□ 1.97
TSR3-202ENST00000566296 MADDQ8WXG6 1647 aa27.34■■□□□ 1.97
TSR3-202ENST00000566296 ZMYM4Q5VZL5 1548 aa27.33■■□□□ 1.97
TSR3-202ENST00000566296 ARHGAP35Q9NRY4 1499 aa27.31■■□□□ 1.96
TSR3-202ENST00000566296 ATP1B4Q9UN42 357 aaPredicted RBP27.29■■□□□ 1.96
TSR3-202ENST00000566296 ZFYVE16Q7Z3T8 1539 aa27.29■■□□□ 1.96
TSR3-202ENST00000566296 CHIC1Q5VXU3 224 aa27.27■■□□□ 1.96
TSR3-202ENST00000566296 PLCH2O75038 1416 aa27.25■■□□□ 1.95
TSR3-202ENST00000566296 MYO5CQ9NQX4 1742 aa27.25■■□□□ 1.95
TSR3-202ENST00000566296 RIMS1Q86UR5 1692 aaKnown RBP27.25■■□□□ 1.95
TSR3-202ENST00000566296 MAGI2Q86UL8 1455 aa27.25■■□□□ 1.95
TSR3-202ENST00000566296 POGZQ7Z3K3 1410 aa27.24■■□□□ 1.95
TSR3-202ENST00000566296 CDK11AQ9UQ88 783 aaPredicted RBP27.24■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms