RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 PRXQ9BXM0 1461 aa35.3■■■■□ 3.24
SHCBP1-205ENST00000566016 KIAA0586Q9BVV6 1533 aa35.26■■■■□ 3.24
SHCBP1-205ENST00000566016 CSRNP3Q8WYN3 585 aa35.2■■■■□ 3.23
SHCBP1-205ENST00000566016 ARAP1Q96P48 1450 aa35.13■■■■□ 3.21
SHCBP1-205ENST00000566016 IQGAP2Q13576 1575 aa35.13■■■■□ 3.21
SHCBP1-205ENST00000566016 CTTNBP2Q8WZ74 1663 aa35.11■■■■□ 3.21
SHCBP1-205ENST00000566016 JPH4Q96JJ6 628 aa35.09■■■■□ 3.21
SHCBP1-205ENST00000566016 ERCC6L2Q5T890 1561 aa35.08■■■■□ 3.21
SHCBP1-205ENST00000566016 KIF21BO75037 1637 aa35.06■■■■□ 3.2
SHCBP1-205ENST00000566016 PRG4Q92954 1404 aaPredicted RBP35.05■■■■□ 3.2
SHCBP1-205ENST00000566016 FAM9AQ8IZU1 332 aaPredicted RBP34.99■■■■□ 3.19
SHCBP1-205ENST00000566016 UGGT2Q9NYU1 1516 aa34.94■■■■□ 3.18
SHCBP1-205ENST00000566016 CYB5RLQ6IPT4 315 aa34.93■■■■□ 3.18
SHCBP1-205ENST00000566016 CARMIL2Q6F5E8 1435 aa34.85■■■■□ 3.17
SHCBP1-205ENST00000566016 DISP1Q96F81 1524 aa34.83■■■■□ 3.17
SHCBP1-205ENST00000566016 GOLGA3Q08378 1498 aa34.79■■■■□ 3.16
SHCBP1-205ENST00000566016 KIAA0556O60303 1618 aa34.79■■■■□ 3.16
SHCBP1-205ENST00000566016 TNIKQ9UKE5 1360 aa34.71■■■■□ 3.15
SHCBP1-205ENST00000566016 PTPRGP23470 1445 aa34.65■■■■□ 3.14
SHCBP1-205ENST00000566016 SAMD9Q5K651 1589 aa34.65■■■■□ 3.14
SHCBP1-205ENST00000566016 ADCY10Q96PN6 1610 aa34.58■■■■□ 3.13
SHCBP1-205ENST00000566016 UBTFP17480 764 aaKnown RBP34.54■■■■□ 3.12
SHCBP1-205ENST00000566016 EFCAB5A4FU69 1503 aa34.53■■■■□ 3.12
SHCBP1-205ENST00000566016 UHRF1BP1LA0JNW5 1464 aa34.48■■■■□ 3.11
SHCBP1-205ENST00000566016 UACAQ9BZF9 1416 aa34.46■■■■□ 3.11
SHCBP1-205ENST00000566016 EHMT2Q96KQ7 1210 aa34.45■■■■□ 3.1
SHCBP1-205ENST00000566016 ABCC2Q92887 1545 aa34.44■■■■□ 3.1
SHCBP1-205ENST00000566016 TTBK1Q5TCY1 1321 aaPredicted RBP34.39■■■■□ 3.1
SHCBP1-205ENST00000566016 ABCA8O94911 1581 aa34.39■■■■□ 3.1
SHCBP1-205ENST00000566016 MAPKBP1O60336 1514 aa34.36■■■■□ 3.09
SHCBP1-205ENST00000566016 PLB1Q6P1J6 1458 aa34.34■■■■□ 3.09
SHCBP1-205ENST00000566016 P3H3Q8IVL6 736 aa34.32■■■■□ 3.08
SHCBP1-205ENST00000566016 FHOD3Q2V2M9 1422 aa34.32■■■■□ 3.08
SHCBP1-205ENST00000566016 NPM1P06748 294 aaKnown RBP eCLIP34.31■■■■□ 3.08
SHCBP1-205ENST00000566016 KDM5BQ9UGL1 1544 aa34.31■■■■□ 3.08
SHCBP1-205ENST00000566016 RANGAP1P46060 587 aaPredicted RBP34.3■■■■□ 3.08
SHCBP1-205ENST00000566016 ARHGAP35Q9NRY4 1499 aa34.3■■■■□ 3.08
SHCBP1-205ENST00000566016 RAPGEF6Q8TEU7 1601 aa34.24■■■■□ 3.07
SHCBP1-205ENST00000566016 ZCCHC11Q5TAX3 1644 aaKnown RBP34.24■■■■□ 3.07
SHCBP1-205ENST00000566016 FMN1Q68DA7 1419 aa34.15■■■■□ 3.06
SHCBP1-205ENST00000566016 KIF13AQ9H1H9 1805 aa34.15■■■■□ 3.06
SHCBP1-205ENST00000566016 CLIP1P30622 1438 aa34.13■■■■□ 3.05
SHCBP1-205ENST00000566016 TRHP20396 242 aaPredicted RBP34.13■■■■□ 3.05
SHCBP1-205ENST00000566016 ABCC10Q5T3U5 1492 aa34.11■■■■□ 3.05
SHCBP1-205ENST00000566016 DIP2BQ9P265 1576 aa34.11■■■■□ 3.05
SHCBP1-205ENST00000566016 ASXL2Q76L83 1435 aa34.1■■■■□ 3.05
SHCBP1-205ENST00000566016 NUP153P49790 1475 aaKnown RBP34.09■■■■□ 3.05
SHCBP1-205ENST00000566016 CEP162Q5TB80 1403 aa34.04■■■■□ 3.04
SHCBP1-205ENST00000566016 ATP10BO94823 1461 aa34.03■■■■□ 3.04
SHCBP1-205ENST00000566016 HECW1Q76N89 1606 aa34.01■■■■□ 3.03
SHCBP1-205ENST00000566016 LOC105371045A0A1W2PR82 267 aa34.01■■■■□ 3.03
SHCBP1-205ENST00000566016 WDR7Q9Y4E6 1490 aa34.01■■■■□ 3.03
SHCBP1-205ENST00000566016 GLI2P10070 1586 aa33.97■■■■□ 3.03
SHCBP1-205ENST00000566016 EPRSP07814 1512 aaKnown RBP33.92■■■■□ 3.02
SHCBP1-205ENST00000566016 PCF11O94913 1555 aaKnown RBP33.91■■■■□ 3.02
SHCBP1-205ENST00000566016 FAM69CQ0P6D2 419 aa33.9■■■■□ 3.02
SHCBP1-205ENST00000566016 CASKIN1Q8WXD9 1431 aa33.89■■■■□ 3.02
SHCBP1-205ENST00000566016 FYCO1Q9BQS8 1478 aa33.87■■■■□ 3.01
SHCBP1-205ENST00000566016 ARID3CA6NKF2 412 aa33.86■■■■□ 3.01
SHCBP1-205ENST00000566016 LRRIQ1Q96JM4 1722 aa33.85■■■■□ 3.01
SHCBP1-205ENST00000566016 MAP3K4Q9Y6R4 1608 aa33.83■■■■□ 3.01
SHCBP1-205ENST00000566016 CDK13Q14004 1512 aaKnown RBP33.83■■■■□ 3.01
SHCBP1-205ENST00000566016 CCDC18Q5T9S5 1454 aa33.78■■■■□ 3
SHCBP1-205ENST00000566016 CFAP43Q8NDM7 1665 aa33.78■■■■□ 3
SHCBP1-205ENST00000566016 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.76■■■■□ 3
SHCBP1-205ENST00000566016 HNRNPUL2Q1KMD3 747 aaKnown RBP33.76■■■■□ 3
SHCBP1-205ENST00000566016 TSPOAP1O95153 1857 aa33.76■■■■□ 3
SHCBP1-205ENST00000566016 PPRC1Q5VV67 1664 aaKnown RBP33.73■■■□□ 2.99
SHCBP1-205ENST00000566016 ABCA9Q8IUA7 1624 aa33.72■■■□□ 2.99
SHCBP1-205ENST00000566016 ATP1B4Q9UN42 357 aaPredicted RBP33.71■■■□□ 2.99
SHCBP1-205ENST00000566016 PLEKHD1A6NEE1 506 aa33.7■■■□□ 2.99
SHCBP1-205ENST00000566016 KCNH8Q96L42 1107 aa33.67■■■□□ 2.98
SHCBP1-205ENST00000566016 CDK11AQ9UQ88 783 aaPredicted RBP33.65■■■□□ 2.98
SHCBP1-205ENST00000566016 VPS8Q8N3P4 1428 aa33.64■■■□□ 2.98
SHCBP1-205ENST00000566016 TEX14Q8IWB6 1497 aa33.62■■■□□ 2.97
SHCBP1-205ENST00000566016 MAGI3Q5TCQ9 1506 aa33.62■■■□□ 2.97
SHCBP1-205ENST00000566016 CD109Q6YHK3 1445 aa33.61■■■□□ 2.97
SHCBP1-205ENST00000566016 TROQ12816 1431 aaPredicted RBP33.6■■■□□ 2.97
SHCBP1-205ENST00000566016 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.56■■■□□ 2.96
SHCBP1-205ENST00000566016 KIF14Q15058 1648 aa33.56■■■□□ 2.96
SHCBP1-205ENST00000566016 TTC37Q6PGP7 1564 aa33.54■■■□□ 2.96
SHCBP1-205ENST00000566016 KDM6BO15054 1643 aa33.48■■■□□ 2.95
SHCBP1-205ENST00000566016 MYO5CQ9NQX4 1742 aa33.43■■■□□ 2.94
SHCBP1-205ENST00000566016 TIAM1Q13009 1591 aa33.42■■■□□ 2.94
SHCBP1-205ENST00000566016 ARAP3Q8WWN8 1544 aa33.41■■■□□ 2.94
SHCBP1-205ENST00000566016 MAP3K1Q13233 1512 aa33.4■■■□□ 2.94
SHCBP1-205ENST00000566016 NEO1Q92859 1461 aa33.4■■■□□ 2.94
SHCBP1-205ENST00000566016 CFAP74Q9C0B2 1584 aa33.4■■■□□ 2.94
SHCBP1-205ENST00000566016 EHBP1L1Q8N3D4 1523 aa33.4■■■□□ 2.94
SHCBP1-205ENST00000566016 PHLDB1Q86UU1 1377 aa33.38■■■□□ 2.93
SHCBP1-205ENST00000566016 MTUS2Q5JR59 1369 aa33.35■■■□□ 2.93
SHCBP1-205ENST00000566016 PLCH2O75038 1416 aa33.35■■■□□ 2.93
SHCBP1-205ENST00000566016 FANCAO15360 1455 aa33.32■■■□□ 2.92
SHCBP1-205ENST00000566016 PREX2Q70Z35 1606 aa33.31■■■□□ 2.92
SHCBP1-205ENST00000566016 COL17A1Q9UMD9 1497 aaPredicted RBP33.3■■■□□ 2.92
SHCBP1-205ENST00000566016 CDC42BPAQ5VT25 1732 aa33.29■■■□□ 2.92
SHCBP1-205ENST00000566016 CDC42BPBQ9Y5S2 1711 aa33.27■■■□□ 2.92
SHCBP1-205ENST00000566016 LRRC9Q6ZRR7 1453 aa33.24■■■□□ 2.91
SHCBP1-205ENST00000566016 SUPT6HQ7KZ85 1726 aaKnown RBP33.24■■■□□ 2.91
SHCBP1-205ENST00000566016 AKNAQ7Z591 1439 aa33.21■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms