RNA–Protein interactions for RNA: ENST00000565970.5

SCAPER-216, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 5

Gene SCAPER, Length 2,388 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-216ENST00000565970 ARHGAP35Q9NRY4 1499 aa26.73■■□□□ 1.87
SCAPER-216ENST00000565970 SYNJ2O15056 1496 aa26.72■■□□□ 1.87
SCAPER-216ENST00000565970 GRIN2AQ12879 1464 aa26.72■■□□□ 1.87
SCAPER-216ENST00000565970 ARAP1Q96P48 1450 aa26.72■■□□□ 1.87
SCAPER-216ENST00000565970 P3H3Q8IVL6 736 aa26.68■■□□□ 1.86
SCAPER-216ENST00000565970 PPARGC1BQ86YN6 1023 aaKnown RBP26.68■■□□□ 1.86
SCAPER-216ENST00000565970 VPS8Q8N3P4 1428 aa26.64■■□□□ 1.86
SCAPER-216ENST00000565970 CEP170Q5SW79 1584 aa26.58■■□□□ 1.85
SCAPER-216ENST00000565970 IQGAP2Q13576 1575 aa26.58■■□□□ 1.85
SCAPER-216ENST00000565970 KIAA0586Q9BVV6 1533 aa26.55■■□□□ 1.84
SCAPER-216ENST00000565970 FHOD3Q2V2M9 1422 aa26.55■■□□□ 1.84
SCAPER-216ENST00000565970 NUP160Q12769 1436 aa26.52■■□□□ 1.84
SCAPER-216ENST00000565970 EFCAB5A4FU69 1503 aa26.52■■□□□ 1.84
SCAPER-216ENST00000565970 CHD1O14646 1710 aa26.52■■□□□ 1.84
SCAPER-216ENST00000565970 SAMD9Q5K651 1589 aa26.49■■□□□ 1.83
SCAPER-216ENST00000565970 TTBK1Q5TCY1 1321 aaPredicted RBP26.49■■□□□ 1.83
SCAPER-216ENST00000565970 UGGT2Q9NYU1 1516 aa26.44■■□□□ 1.82
SCAPER-216ENST00000565970 APLP2Q06481 763 aa26.39■■□□□ 1.82
SCAPER-216ENST00000565970 JPH4Q96JJ6 628 aa26.39■■□□□ 1.81
SCAPER-216ENST00000565970 PCGF6Q9BYE7 350 aa26.38■■□□□ 1.81
SCAPER-216ENST00000565970 DISP1Q96F81 1524 aa26.37■■□□□ 1.81
SCAPER-216ENST00000565970 ATP1B4Q9UN42 357 aaPredicted RBP26.35■■□□□ 1.81
SCAPER-216ENST00000565970 PCF11O94913 1555 aaKnown RBP26.34■■□□□ 1.81
SCAPER-216ENST00000565970 TRIM26Q12899 539 aaPredicted RBP26.33■■□□□ 1.81
SCAPER-216ENST00000565970 KIAA0556O60303 1618 aa26.32■■□□□ 1.8
SCAPER-216ENST00000565970 FMN1Q68DA7 1419 aa26.32■■□□□ 1.8
SCAPER-216ENST00000565970 KANK4Q5T7N3 995 aaPredicted RBP26.29■■□□□ 1.8
SCAPER-216ENST00000565970 CASKIN1Q8WXD9 1431 aa26.27■■□□□ 1.8
SCAPER-216ENST00000565970 FYCO1Q9BQS8 1478 aa26.23■■□□□ 1.79
SCAPER-216ENST00000565970 PRG4Q92954 1404 aaPredicted RBP26.22■■□□□ 1.79
SCAPER-216ENST00000565970 CARMIL2Q6F5E8 1435 aa26.21■■□□□ 1.79
SCAPER-216ENST00000565970 CLASP1Q7Z460 1538 aa26.19■■□□□ 1.78
SCAPER-216ENST00000565970 TIAM1Q13009 1591 aa26.18■■□□□ 1.78
SCAPER-216ENST00000565970 SHROOM2Q13796 1616 aa26.15■■□□□ 1.78
SCAPER-216ENST00000565970 LRRIQ1Q96JM4 1722 aa26.13■■□□□ 1.77
SCAPER-216ENST00000565970 MAP3K1Q13233 1512 aa26.13■■□□□ 1.77
SCAPER-216ENST00000565970 ARID3CA6NKF2 412 aa26.12■■□□□ 1.77
SCAPER-216ENST00000565970 ERCC6L2Q5T890 1561 aa26.12■■□□□ 1.77
SCAPER-216ENST00000565970 CFAP43Q8NDM7 1665 aa26.1■■□□□ 1.77
SCAPER-216ENST00000565970 LRRC9Q6ZRR7 1453 aa26.08■■□□□ 1.77
SCAPER-216ENST00000565970 PLB1Q6P1J6 1458 aa26.08■■□□□ 1.76
SCAPER-216ENST00000565970 OSCARQ8IYS5 282 aa26.07■■□□□ 1.76
SCAPER-216ENST00000565970 HECW1Q76N89 1606 aa26.06■■□□□ 1.76
SCAPER-216ENST00000565970 RAPGEF6Q8TEU7 1601 aa26.04■■□□□ 1.76
SCAPER-216ENST00000565970 PTPRGP23470 1445 aa26.02■■□□□ 1.76
SCAPER-216ENST00000565970 EPRSP07814 1512 aaKnown RBP26.02■■□□□ 1.76
SCAPER-216ENST00000565970 CDK13Q14004 1512 aaKnown RBP26.02■■□□□ 1.76
SCAPER-216ENST00000565970 NUP153P49790 1475 aaKnown RBP26.01■■□□□ 1.76
SCAPER-216ENST00000565970 CCDC18Q5T9S5 1454 aa25.97■■□□□ 1.75
SCAPER-216ENST00000565970 MTUS2Q5JR59 1369 aa25.96■■□□□ 1.75
SCAPER-216ENST00000565970 ABCA8O94911 1581 aa25.95■■□□□ 1.74
SCAPER-216ENST00000565970 MAGI3Q5TCQ9 1506 aa25.95■■□□□ 1.74
SCAPER-216ENST00000565970 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.93■■□□□ 1.74
SCAPER-216ENST00000565970 HNRNPUL2Q1KMD3 747 aaKnown RBP25.93■■□□□ 1.74
SCAPER-216ENST00000565970 PHLDB1Q86UU1 1377 aa25.89■■□□□ 1.74
SCAPER-216ENST00000565970 UACAQ9BZF9 1416 aa25.85■■□□□ 1.73
SCAPER-216ENST00000565970 EHBP1L1Q8N3D4 1523 aa25.84■■□□□ 1.73
SCAPER-216ENST00000565970 ATP10BO94823 1461 aa25.83■■□□□ 1.73
SCAPER-216ENST00000565970 RRBP1Q9P2E9 1410 aaKnown RBP25.8■■□□□ 1.72
SCAPER-216ENST00000565970 NCOA2Q15596 1464 aa25.8■■□□□ 1.72
SCAPER-216ENST00000565970 SUPT6HQ7KZ85 1726 aaKnown RBP25.77■■□□□ 1.72
SCAPER-216ENST00000565970 CCNB3Q8WWL7 1395 aa25.77■■□□□ 1.72
SCAPER-216ENST00000565970 CDK11AQ9UQ88 783 aaPredicted RBP25.77■■□□□ 1.72
SCAPER-216ENST00000565970 ABCC2Q92887 1545 aa25.75■■□□□ 1.71
SCAPER-216ENST00000565970 ARHGEF11O15085 1522 aa25.72■■□□□ 1.71
SCAPER-216ENST00000565970 TROQ12816 1431 aaPredicted RBP25.71■■□□□ 1.71
SCAPER-216ENST00000565970 PLEKHD1A6NEE1 506 aa25.7■■□□□ 1.71
SCAPER-216ENST00000565970 FAM50AQ14320 339 aaKnown RBP25.69■■□□□ 1.7
SCAPER-216ENST00000565970 ITGAEP38570 1179 aa25.68■■□□□ 1.7
SCAPER-216ENST00000565970 UHRF1BP1LA0JNW5 1464 aa25.67■■□□□ 1.7
SCAPER-216ENST00000565970 MYOM3Q5VTT5 1437 aa25.67■■□□□ 1.7
SCAPER-216ENST00000565970 FGD6Q6ZV73 1430 aa25.66■■□□□ 1.7
SCAPER-216ENST00000565970 KIF14Q15058 1648 aa25.64■■□□□ 1.7
SCAPER-216ENST00000565970 ADCY10Q96PN6 1610 aa25.64■■□□□ 1.69
SCAPER-216ENST00000565970 ZCCHC11Q5TAX3 1644 aaKnown RBP25.6■■□□□ 1.69
SCAPER-216ENST00000565970 KDM5BQ9UGL1 1544 aa25.6■■□□□ 1.69
SCAPER-216ENST00000565970 PTPN23Q9H3S7 1636 aa25.53■■□□□ 1.68
SCAPER-216ENST00000565970 KCNH8Q96L42 1107 aa25.52■■□□□ 1.68
SCAPER-216ENST00000565970 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.51■■□□□ 1.67
SCAPER-216ENST00000565970 ABCC10Q5T3U5 1492 aa25.51■■□□□ 1.67
SCAPER-216ENST00000565970 RIMBP3CA6NJZ7 1639 aa25.5■■□□□ 1.67
SCAPER-216ENST00000565970 RIMBP3BA6NNM3 1639 aa25.5■■□□□ 1.67
SCAPER-216ENST00000565970 RIMBP3Q9UFD9 1639 aa25.5■■□□□ 1.67
SCAPER-216ENST00000565970 GPATCH8Q9UKJ3 1502 aaKnown RBP25.5■■□□□ 1.67
SCAPER-216ENST00000565970 MIA2Q96PC5 1412 aa25.5■■□□□ 1.67
SCAPER-216ENST00000565970 ZNF644Q9H582 1327 aaPredicted RBP25.49■■□□□ 1.67
SCAPER-216ENST00000565970 CYB5RLQ6IPT4 315 aa25.48■■□□□ 1.67
SCAPER-216ENST00000565970 TCOF1Q13428 1488 aaKnown RBP25.47■■□□□ 1.67
SCAPER-216ENST00000565970 CFDP1Q9UEE9 299 aaPredicted RBP25.46■■□□□ 1.67
SCAPER-216ENST00000565970 PTPRKQ15262 1439 aa25.44■■□□□ 1.66
SCAPER-216ENST00000565970 ZNF777Q9ULD5 760 aaPredicted RBP25.44■■□□□ 1.66
SCAPER-216ENST00000565970 CDC42BPAQ5VT25 1732 aa25.43■■□□□ 1.66
SCAPER-216ENST00000565970 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.42■■□□□ 1.66
SCAPER-216ENST00000565970 ITSN2Q9NZM3 1697 aa25.41■■□□□ 1.66
SCAPER-216ENST00000565970 NPM1P06748 294 aaKnown RBP eCLIP25.41■■□□□ 1.66
SCAPER-216ENST00000565970 TTC37Q6PGP7 1564 aa25.41■■□□□ 1.66
SCAPER-216ENST00000565970 HRCP23327 699 aa25.39■■□□□ 1.66
SCAPER-216ENST00000565970 ASXL2Q76L83 1435 aa25.38■■□□□ 1.65
SCAPER-216ENST00000565970 WDR7Q9Y4E6 1490 aa25.37■■□□□ 1.65
SCAPER-216ENST00000565970 CCER1Q8TC90 406 aaPredicted RBP25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms