RNA–Protein interactions for RNA: ENST00000565964.5

COQ9-208, Transcript of coenzyme Q9, human

TSL 3

Gene COQ9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COQ9-208	ENST00000565964	KIF21B	O75037	1637 aa		34.7	■■■■□ 3.15
COQ9-208	ENST00000565964	CEP170	Q5SW79	1584 aa		34.68	■■■■□ 3.14
COQ9-208	ENST00000565964	CYB5RL	Q6IPT4	315 aa		34.66	■■■■□ 3.14
COQ9-208	ENST00000565964	CLASP1	Q7Z460	1538 aa		34.64	■■■■□ 3.14
COQ9-208	ENST00000565964	KIAA0586	Q9BVV6	1533 aa		34.61	■■■■□ 3.13
COQ9-208	ENST00000565964	ARAP1	Q96P48	1450 aa		34.58	■■■■□ 3.13
COQ9-208	ENST00000565964	GOLGA3	Q08378	1498 aa		34.55	■■■■□ 3.12
COQ9-208	ENST00000565964	JPH4	Q96JJ6	628 aa		34.44	■■■■□ 3.1
COQ9-208	ENST00000565964	SHROOM2	Q13796	1616 aa		34.41	■■■■□ 3.1
COQ9-208	ENST00000565964	IQGAP2	Q13576	1575 aa		34.39	■■■■□ 3.1
COQ9-208	ENST00000565964	UBTF	P17480	764 aa	Known RBP	34.35	■■■■□ 3.09
COQ9-208	ENST00000565964	CTTNBP2	Q8WZ74	1663 aa		34.34	■■■■□ 3.09
COQ9-208	ENST00000565964	UGGT2	Q9NYU1	1516 aa		34.33	■■■■□ 3.09
COQ9-208	ENST00000565964	TNIK	Q9UKE5	1360 aa		34.32	■■■■□ 3.08
COQ9-208	ENST00000565964	LOC105371045	A0A1W2PR82	267 aa		34.28	■■■■□ 3.08
COQ9-208	ENST00000565964	EHMT2	Q96KQ7	1210 aa		34.28	■■■■□ 3.08
COQ9-208	ENST00000565964	PRG4	Q92954	1404 aa	Predicted RBP	34.26	■■■■□ 3.07
COQ9-208	ENST00000565964	TRH	P20396	242 aa	Predicted RBP	34.22	■■■■□ 3.07
COQ9-208	ENST00000565964	DISP1	Q96F81	1524 aa		34.2	■■■■□ 3.07
COQ9-208	ENST00000565964	ERCC6L2	Q5T890	1561 aa		34.16	■■■■□ 3.06
COQ9-208	ENST00000565964	CARMIL2	Q6F5E8	1435 aa		34.14	■■■■□ 3.06
COQ9-208	ENST00000565964	SAMD9	Q5K651	1589 aa		34.09	■■■■□ 3.05
COQ9-208	ENST00000565964	KIAA0556	O60303	1618 aa		34.06	■■■■□ 3.04
COQ9-208	ENST00000565964	EFCAB5	A4FU69	1503 aa		34.04	■■■■□ 3.04
COQ9-208	ENST00000565964	ARHGAP35	Q9NRY4	1499 aa		34	■■■■□ 3.03
COQ9-208	ENST00000565964	PTPRG	P23470	1445 aa		33.95	■■■■□ 3.02
COQ9-208	ENST00000565964	CLIP1	P30622	1438 aa		33.95	■■■■□ 3.02
COQ9-208	ENST00000565964	RANGAP1	P46060	587 aa	Predicted RBP	33.94	■■■■□ 3.02
COQ9-208	ENST00000565964	CEP162	Q5TB80	1403 aa		33.94	■■■■□ 3.02
COQ9-208	ENST00000565964	P3H3	Q8IVL6	736 aa		33.9	■■■■□ 3.02
COQ9-208	ENST00000565964	FHOD3	Q2V2M9	1422 aa		33.87	■■■■□ 3.01
COQ9-208	ENST00000565964	UACA	Q9BZF9	1416 aa		33.76	■■■□□ 2.99
COQ9-208	ENST00000565964	UHRF1BP1L	A0JNW5	1464 aa		33.75	■■■□□ 2.99
COQ9-208	ENST00000565964	FMN1	Q68DA7	1419 aa		33.73	■■■□□ 2.99
COQ9-208	ENST00000565964	ABCA8	O94911	1581 aa		33.72	■■■□□ 2.99
COQ9-208	ENST00000565964	PLB1	Q6P1J6	1458 aa		33.7	■■■□□ 2.99
COQ9-208	ENST00000565964	TTBK1	Q5TCY1	1321 aa	Predicted RBP	33.69	■■■□□ 2.98
COQ9-208	ENST00000565964	ABCC2	Q92887	1545 aa		33.65	■■■□□ 2.98
COQ9-208	ENST00000565964	ADCY10	Q96PN6	1610 aa		33.62	■■■□□ 2.97
COQ9-208	ENST00000565964	CASKIN1	Q8WXD9	1431 aa		33.57	■■■□□ 2.96
COQ9-208	ENST00000565964	KDM5B	Q9UGL1	1544 aa		33.57	■■■□□ 2.96
COQ9-208	ENST00000565964	RAPGEF6	Q8TEU7	1601 aa		33.57	■■■□□ 2.96
COQ9-208	ENST00000565964	NUP153	P49790	1475 aa	Known RBP	33.55	■■■□□ 2.96
COQ9-208	ENST00000565964	VPS8	Q8N3P4	1428 aa		33.53	■■■□□ 2.96
COQ9-208	ENST00000565964	ATP10B	O94823	1461 aa		33.48	■■■□□ 2.95
COQ9-208	ENST00000565964	FYCO1	Q9BQS8	1478 aa		33.48	■■■□□ 2.95
COQ9-208	ENST00000565964	KIF13A	Q9H1H9	1805 aa		33.44	■■■□□ 2.94
COQ9-208	ENST00000565964	NPM1	P06748	294 aa	Known RBP eCLIP	33.43	■■■□□ 2.94
COQ9-208	ENST00000565964	PCF11	O94913	1555 aa	Known RBP	33.43	■■■□□ 2.94
COQ9-208	ENST00000565964	HECW1	Q76N89	1606 aa		33.4	■■■□□ 2.94
COQ9-208	ENST00000565964	EPRS	P07814	1512 aa	Known RBP	33.39	■■■□□ 2.94
COQ9-208	ENST00000565964	MAPKBP1	O60336	1514 aa		33.36	■■■□□ 2.93
COQ9-208	ENST00000565964	ZCCHC11	Q5TAX3	1644 aa	Known RBP	33.35	■■■□□ 2.93
COQ9-208	ENST00000565964	CCDC18	Q5T9S5	1454 aa		33.32	■■■□□ 2.92
COQ9-208	ENST00000565964	ATP1B4	Q9UN42	357 aa	Predicted RBP	33.3	■■■□□ 2.92
COQ9-208	ENST00000565964	ASXL2	Q76L83	1435 aa		33.28	■■■□□ 2.92
COQ9-208	ENST00000565964	ARID3C	A6NKF2	412 aa		33.28	■■■□□ 2.92
COQ9-208	ENST00000565964	CDK13	Q14004	1512 aa	Known RBP	33.28	■■■□□ 2.92
COQ9-208	ENST00000565964	LRRIQ1	Q96JM4	1722 aa		33.25	■■■□□ 2.91
COQ9-208	ENST00000565964	MAP3K1	Q13233	1512 aa		33.24	■■■□□ 2.91
COQ9-208	ENST00000565964	FAM69C	Q0P6D2	419 aa		33.23	■■■□□ 2.91
COQ9-208	ENST00000565964	ABCC10	Q5T3U5	1492 aa		33.23	■■■□□ 2.91
COQ9-208	ENST00000565964	WDR7	Q9Y4E6	1490 aa		33.2	■■■□□ 2.91
COQ9-208	ENST00000565964	PLEKHD1	A6NEE1	506 aa		33.2	■■■□□ 2.91
COQ9-208	ENST00000565964	CDK11A	Q9UQ88	783 aa	Predicted RBP	33.2	■■■□□ 2.91
COQ9-208	ENST00000565964	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	33.19	■■■□□ 2.9
COQ9-208	ENST00000565964	HNRNPUL2	Q1KMD3	747 aa	Known RBP	33.19	■■■□□ 2.9
COQ9-208	ENST00000565964	DIP2B	Q9P265	1576 aa		33.18	■■■□□ 2.9
COQ9-208	ENST00000565964	TIAM1	Q13009	1591 aa		33.12	■■■□□ 2.89
COQ9-208	ENST00000565964	TRO	Q12816	1431 aa	Predicted RBP	33.11	■■■□□ 2.89
COQ9-208	ENST00000565964	AEBP2	Q6ZN18	517 aa	Predicted RBP	33.11	■■■□□ 2.89
COQ9-208	ENST00000565964	MAGI3	Q5TCQ9	1506 aa		33.1	■■■□□ 2.89
COQ9-208	ENST00000565964	CFAP43	Q8NDM7	1665 aa		33.07	■■■□□ 2.88
COQ9-208	ENST00000565964	GLI2	P10070	1586 aa		33.05	■■■□□ 2.88
COQ9-208	ENST00000565964	TSPOAP1	O95153	1857 aa		33.03	■■■□□ 2.88
COQ9-208	ENST00000565964	LRRC9	Q6ZRR7	1453 aa		33.02	■■■□□ 2.88
COQ9-208	ENST00000565964	APLP2	Q06481	763 aa		33.02	■■■□□ 2.88
COQ9-208	ENST00000565964	KANK4	Q5T7N3	995 aa	Predicted RBP	33.02	■■■□□ 2.88
COQ9-208	ENST00000565964	KCNH8	Q96L42	1107 aa		33.02	■■■□□ 2.88
COQ9-208	ENST00000565964	MTUS2	Q5JR59	1369 aa		32.98	■■■□□ 2.87
COQ9-208	ENST00000565964	EHBP1L1	Q8N3D4	1523 aa		32.96	■■■□□ 2.87
COQ9-208	ENST00000565964	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	32.91	■■■□□ 2.86	6e-6	■■■■■ 29.8
COQ9-208	ENST00000565964	ABCA9	Q8IUA7	1624 aa		32.91	■■■□□ 2.86
COQ9-208	ENST00000565964	KIF14	Q15058	1648 aa		32.88	■■■□□ 2.85
COQ9-208	ENST00000565964	KDM6B	O15054	1643 aa		32.87	■■■□□ 2.85
COQ9-208	ENST00000565964	CD109	Q6YHK3	1445 aa		32.85	■■■□□ 2.85
COQ9-208	ENST00000565964	MAP3K4	Q9Y6R4	1608 aa		32.84	■■■□□ 2.85
COQ9-208	ENST00000565964	TTC37	Q6PGP7	1564 aa		32.81	■■■□□ 2.84
COQ9-208	ENST00000565964	NCOA2	Q15596	1464 aa		32.8	■■■□□ 2.84
COQ9-208	ENST00000565964	PLCH2	O75038	1416 aa		32.8	■■■□□ 2.84
COQ9-208	ENST00000565964	PPRC1	Q5VV67	1664 aa	Known RBP	32.78	■■■□□ 2.84
COQ9-208	ENST00000565964	ARAP3	Q8WWN8	1544 aa		32.77	■■■□□ 2.84
COQ9-208	ENST00000565964	SUPT6H	Q7KZ85	1726 aa	Known RBP	32.76	■■■□□ 2.83
COQ9-208	ENST00000565964	GPATCH8	Q9UKJ3	1502 aa	Known RBP	32.76	■■■□□ 2.83
COQ9-208	ENST00000565964	CCNB3	Q8WWL7	1395 aa		32.7	■■■□□ 2.83
COQ9-208	ENST00000565964	PHLDB1	Q86UU1	1377 aa		32.65	■■■□□ 2.82
COQ9-208	ENST00000565964	TEX14	Q8IWB6	1497 aa		32.65	■■■□□ 2.82
COQ9-208	ENST00000565964	EFCAB2	Q5VUJ9	269 aa		32.64	■■■□□ 2.82
COQ9-208	ENST00000565964	NEO1	Q92859	1461 aa		32.63	■■■□□ 2.81
COQ9-208	ENST00000565964	PREX2	Q70Z35	1606 aa		32.62	■■■□□ 2.81

Retrieved 100 of 20,778 RNA–protein pairs in 11 ms