RNA–Protein interactions for RNA: ENST00000565602.5

EDC3-208, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 5

Gene EDC3, Length 1,862 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-208ENST00000565602 UBTFP17480 764 aaKnown RBP29.61■■■□□ 2.33
EDC3-208ENST00000565602 TNIKQ9UKE5 1360 aa29.59■■■□□ 2.33
EDC3-208ENST00000565602 KIAA0586Q9BVV6 1533 aa29.52■■■□□ 2.32
EDC3-208ENST00000565602 IQGAP2Q13576 1575 aa29.51■■■□□ 2.31
EDC3-208ENST00000565602 CLASP1Q7Z460 1538 aa29.5■■■□□ 2.31
EDC3-208ENST00000565602 CEP162Q5TB80 1403 aa29.39■■■□□ 2.3
EDC3-208ENST00000565602 SHROOM2Q13796 1616 aa29.39■■■□□ 2.29
EDC3-208ENST00000565602 UGGT2Q9NYU1 1516 aa29.38■■■□□ 2.29
EDC3-208ENST00000565602 OSCARQ8IYS5 282 aa29.37■■■□□ 2.29
EDC3-208ENST00000565602 SAMD9Q5K651 1589 aa29.33■■■□□ 2.29
EDC3-208ENST00000565602 CLIP1P30622 1438 aa29.31■■■□□ 2.28
EDC3-208ENST00000565602 RANGAP1P46060 587 aaPredicted RBP29.3■■■□□ 2.28
EDC3-208ENST00000565602 ARHGAP35Q9NRY4 1499 aa29.29■■■□□ 2.28
EDC3-208ENST00000565602 JPH4Q96JJ6 628 aa29.28■■■□□ 2.28
EDC3-208ENST00000565602 EFCAB5A4FU69 1503 aa29.28■■■□□ 2.28
EDC3-208ENST00000565602 DISP1Q96F81 1524 aa29.27■■■□□ 2.28
EDC3-208ENST00000565602 KIAA0556O60303 1618 aa29.24■■■□□ 2.27
EDC3-208ENST00000565602 ERCC6L2Q5T890 1561 aa29.2■■■□□ 2.26
EDC3-208ENST00000565602 PRG4Q92954 1404 aaPredicted RBP29.19■■■□□ 2.26
EDC3-208ENST00000565602 ARAP1Q96P48 1450 aa29.18■■■□□ 2.26
EDC3-208ENST00000565602 FHOD3Q2V2M9 1422 aa29.14■■■□□ 2.25
EDC3-208ENST00000565602 CARMIL2Q6F5E8 1435 aa29.12■■■□□ 2.25
EDC3-208ENST00000565602 P3H3Q8IVL6 736 aa29.12■■■□□ 2.25
EDC3-208ENST00000565602 ARHGEF11O15085 1522 aa29■■■□□ 2.23
EDC3-208ENST00000565602 PCGF6Q9BYE7 350 aa28.99■■■□□ 2.23
EDC3-208ENST00000565602 VPS8Q8N3P4 1428 aa28.97■■■□□ 2.23
EDC3-208ENST00000565602 RIMBP3CA6NJZ7 1639 aa28.96■■■□□ 2.23
EDC3-208ENST00000565602 RIMBP3BA6NNM3 1639 aa28.96■■■□□ 2.23
EDC3-208ENST00000565602 RIMBP3Q9UFD9 1639 aa28.96■■■□□ 2.23
EDC3-208ENST00000565602 FMN1Q68DA7 1419 aa28.95■■■□□ 2.22
EDC3-208ENST00000565602 PCF11O94913 1555 aaKnown RBP28.93■■■□□ 2.22
EDC3-208ENST00000565602 TRIM26Q12899 539 aaPredicted RBP28.92■■■□□ 2.22
EDC3-208ENST00000565602 PTPRGP23470 1445 aa28.91■■■□□ 2.22
EDC3-208ENST00000565602 TTBK1Q5TCY1 1321 aaPredicted RBP28.88■■■□□ 2.21
EDC3-208ENST00000565602 ABCA8O94911 1581 aa28.87■■■□□ 2.21
EDC3-208ENST00000565602 RAPGEF6Q8TEU7 1601 aa28.86■■■□□ 2.21
EDC3-208ENST00000565602 PLB1Q6P1J6 1458 aa28.85■■■□□ 2.21
EDC3-208ENST00000565602 CASKIN1Q8WXD9 1431 aa28.85■■■□□ 2.21
EDC3-208ENST00000565602 LRRIQ1Q96JM4 1722 aa28.84■■■□□ 2.21
EDC3-208ENST00000565602 FYCO1Q9BQS8 1478 aa28.83■■■□□ 2.21
EDC3-208ENST00000565602 HECW1Q76N89 1606 aa28.78■■■□□ 2.2
EDC3-208ENST00000565602 UACAQ9BZF9 1416 aa28.77■■■□□ 2.2
EDC3-208ENST00000565602 NUP153P49790 1475 aaKnown RBP28.76■■■□□ 2.19
EDC3-208ENST00000565602 ABCC2Q92887 1545 aa28.74■■■□□ 2.19
EDC3-208ENST00000565602 ADCY10Q96PN6 1610 aa28.74■■■□□ 2.19
EDC3-208ENST00000565602 UHRF1BP1LA0JNW5 1464 aa28.72■■■□□ 2.19
EDC3-208ENST00000565602 CFAP43Q8NDM7 1665 aa28.69■■■□□ 2.18
EDC3-208ENST00000565602 EPRSP07814 1512 aaKnown RBP28.68■■■□□ 2.18
EDC3-208ENST00000565602 DNAJC5Q9H3Z4 198 aa28.66■■■□□ 2.18
EDC3-208ENST00000565602 ATP1B4Q9UN42 357 aaPredicted RBP28.65■■■□□ 2.18
EDC3-208ENST00000565602 CDK13Q14004 1512 aaKnown RBP28.65■■■□□ 2.18
EDC3-208ENST00000565602 TIAM1Q13009 1591 aa28.65■■■□□ 2.18
EDC3-208ENST00000565602 CCDC18Q5T9S5 1454 aa28.63■■■□□ 2.17
EDC3-208ENST00000565602 MAP3K1Q13233 1512 aa28.63■■■□□ 2.17
EDC3-208ENST00000565602 PPARGC1BQ86YN6 1023 aaKnown RBP28.61■■■□□ 2.17
EDC3-208ENST00000565602 ATP10BO94823 1461 aa28.61■■■□□ 2.17
EDC3-208ENST00000565602 CYB5RLQ6IPT4 315 aa28.61■■■□□ 2.17
EDC3-208ENST00000565602 ZCCHC11Q5TAX3 1644 aaKnown RBP28.6■■■□□ 2.17
EDC3-208ENST00000565602 KDM5BQ9UGL1 1544 aa28.6■■■□□ 2.17
EDC3-208ENST00000565602 ARID3CA6NKF2 412 aa28.58■■■□□ 2.17
EDC3-208ENST00000565602 MAGI3Q5TCQ9 1506 aa28.53■■■□□ 2.16
EDC3-208ENST00000565602 APLP2Q06481 763 aa28.49■■■□□ 2.15
EDC3-208ENST00000565602 LRRC9Q6ZRR7 1453 aa28.48■■■□□ 2.15
EDC3-208ENST00000565602 KANK4Q5T7N3 995 aaPredicted RBP28.47■■■□□ 2.15
EDC3-208ENST00000565602 EHBP1L1Q8N3D4 1523 aa28.43■■■□□ 2.14
EDC3-208ENST00000565602 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.42■■■□□ 2.14
EDC3-208ENST00000565602 HRCP23327 699 aa28.42■■■□□ 2.14
EDC3-208ENST00000565602 HNRNPUL2Q1KMD3 747 aaKnown RBP28.42■■■□□ 2.14
EDC3-208ENST00000565602 TROQ12816 1431 aaPredicted RBP28.38■■■□□ 2.13
EDC3-208ENST00000565602 MTUS2Q5JR59 1369 aa28.37■■■□□ 2.13
EDC3-208ENST00000565602 CDK11AQ9UQ88 783 aaPredicted RBP28.35■■■□□ 2.13
EDC3-208ENST00000565602 MAPKBP1O60336 1514 aa28.35■■■□□ 2.13
EDC3-208ENST00000565602 KIF14Q15058 1648 aa28.34■■■□□ 2.13
EDC3-208ENST00000565602 NPM1P06748 294 aaKnown RBP eCLIP28.34■■■□□ 2.13
EDC3-208ENST00000565602 ASXL2Q76L83 1435 aa28.33■■■□□ 2.13
EDC3-208ENST00000565602 SUPT6HQ7KZ85 1726 aaKnown RBP28.33■■■□□ 2.13
EDC3-208ENST00000565602 PLEKHD1A6NEE1 506 aa28.32■■■□□ 2.12
EDC3-208ENST00000565602 WDR7Q9Y4E6 1490 aa28.31■■■□□ 2.12
EDC3-208ENST00000565602 NCOA2Q15596 1464 aa28.26■■■□□ 2.11
EDC3-208ENST00000565602 ABCC10Q5T3U5 1492 aa28.22■■■□□ 2.11
EDC3-208ENST00000565602 TTC37Q6PGP7 1564 aa28.21■■■□□ 2.11
EDC3-208ENST00000565602 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.2■■■□□ 2.11
EDC3-208ENST00000565602 PHLDB1Q86UU1 1377 aa28.17■■■□□ 2.1
EDC3-208ENST00000565602 CDC42BPAQ5VT25 1732 aa28.17■■■□□ 2.1
EDC3-208ENST00000565602 ABCA9Q8IUA7 1624 aa28.16■■■□□ 2.1
EDC3-208ENST00000565602 KCNH8Q96L42 1107 aa28.16■■■□□ 2.1
EDC3-208ENST00000565602 DIP2BQ9P265 1576 aa28.13■■■□□ 2.09
EDC3-208ENST00000565602 MYO5CQ9NQX4 1742 aa28.11■■■□□ 2.09
EDC3-208ENST00000565602 ITSN2Q9NZM3 1697 aa28.11■■■□□ 2.09
EDC3-208ENST00000565602 GLI2P10070 1586 aa28.1■■■□□ 2.09
EDC3-208ENST00000565602 KIF13AQ9H1H9 1805 aa28.1■■■□□ 2.09
EDC3-208ENST00000565602 PREX2Q70Z35 1606 aa28.09■■■□□ 2.09
EDC3-208ENST00000565602 GPATCH8Q9UKJ3 1502 aaKnown RBP28.09■■■□□ 2.09
EDC3-208ENST00000565602 CDC42BPBQ9Y5S2 1711 aa28.09■■■□□ 2.09
EDC3-208ENST00000565602 MYOM3Q5VTT5 1437 aa28.08■■■□□ 2.09
EDC3-208ENST00000565602 CCNB3Q8WWL7 1395 aa28.07■■■□□ 2.08
EDC3-208ENST00000565602 MAP3K4Q9Y6R4 1608 aa28.05■■■□□ 2.08
EDC3-208ENST00000565602 FGD6Q6ZV73 1430 aa28.02■■■□□ 2.08
EDC3-208ENST00000565602 RRBP1Q9P2E9 1410 aaKnown RBP28.01■■■□□ 2.07
EDC3-208ENST00000565602 ARAP3Q8WWN8 1544 aa27.98■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms