RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 CEP170Q5SW79 1584 aa31■■■□□ 2.55
CSPG4P13-201ENST00000565545 LOC105371045A0A1W2PR82 267 aa30.99■■■□□ 2.55
CSPG4P13-201ENST00000565545 KIF21BO75037 1637 aa30.98■■■□□ 2.55
CSPG4P13-201ENST00000565545 ERICH3Q5RHP9 1530 aa30.92■■■□□ 2.54
CSPG4P13-201ENST00000565545 IGF1RP08069 1367 aa30.92■■■□□ 2.54
CSPG4P13-201ENST00000565545 PRXQ9BXM0 1461 aa30.89■■■□□ 2.54
CSPG4P13-201ENST00000565545 GOLGA3Q08378 1498 aa30.89■■■□□ 2.53
CSPG4P13-201ENST00000565545 JPH4Q96JJ6 628 aa30.88■■■□□ 2.53
CSPG4P13-201ENST00000565545 PRG4Q92954 1404 aaPredicted RBP30.86■■■□□ 2.53
CSPG4P13-201ENST00000565545 SHROOM2Q13796 1616 aa30.85■■■□□ 2.53
CSPG4P13-201ENST00000565545 CUL7Q14999 1698 aa30.81■■■□□ 2.52
CSPG4P13-201ENST00000565545 CARMIL1Q5VZK9 1371 aa30.78■■■□□ 2.52
CSPG4P13-201ENST00000565545 RAPGEF2Q9Y4G8 1499 aa30.76■■■□□ 2.51
CSPG4P13-201ENST00000565545 NPM1P06748 294 aaKnown RBP eCLIP30.74■■■□□ 2.51
CSPG4P13-201ENST00000565545 TNIKQ9UKE5 1360 aa30.74■■■□□ 2.51
CSPG4P13-201ENST00000565545 EHMT2Q96KQ7 1210 aa30.72■■■□□ 2.51
CSPG4P13-201ENST00000565545 UBTFP17480 764 aaKnown RBP30.69■■■□□ 2.5
CSPG4P13-201ENST00000565545 FAM69CQ0P6D2 419 aa30.65■■■□□ 2.5
CSPG4P13-201ENST00000565545 KIF13AQ9H1H9 1805 aa30.54■■■□□ 2.48
CSPG4P13-201ENST00000565545 KIAA0586Q9BVV6 1533 aa30.52■■■□□ 2.48
CSPG4P13-201ENST00000565545 ABCC10Q5T3U5 1492 aa30.51■■■□□ 2.48
CSPG4P13-201ENST00000565545 CEP162Q5TB80 1403 aa30.47■■■□□ 2.47
CSPG4P13-201ENST00000565545 MAPKBP1O60336 1514 aa30.45■■■□□ 2.47
CSPG4P13-201ENST00000565545 TTBK1Q5TCY1 1321 aaPredicted RBP30.44■■■□□ 2.46
CSPG4P13-201ENST00000565545 ADCY10Q96PN6 1610 aa30.41■■■□□ 2.46
CSPG4P13-201ENST00000565545 CTTNBP2Q8WZ74 1663 aa30.39■■■□□ 2.46
CSPG4P13-201ENST00000565545 PTPRGP23470 1445 aa30.38■■■□□ 2.45
CSPG4P13-201ENST00000565545 DIP2BQ9P265 1576 aa30.35■■■□□ 2.45
CSPG4P13-201ENST00000565545 CLIP1P30622 1438 aa30.34■■■□□ 2.45
CSPG4P13-201ENST00000565545 CARMIL2Q6F5E8 1435 aa30.29■■■□□ 2.44
CSPG4P13-201ENST00000565545 KDM6BO15054 1643 aa30.22■■■□□ 2.43
CSPG4P13-201ENST00000565545 TSPOAP1O95153 1857 aa30.16■■■□□ 2.42
CSPG4P13-201ENST00000565545 ABCC2Q92887 1545 aa30.16■■■□□ 2.42
CSPG4P13-201ENST00000565545 IQGAP2Q13576 1575 aa30.15■■■□□ 2.42
CSPG4P13-201ENST00000565545 KDM4FA0A1W2PPD8 638 aa30.15■■■□□ 2.42
CSPG4P13-201ENST00000565545 EFCAB5A4FU69 1503 aa30.15■■■□□ 2.42
CSPG4P13-201ENST00000565545 ARHGAP35Q9NRY4 1499 aa30.13■■■□□ 2.41
CSPG4P13-201ENST00000565545 RANGAP1P46060 587 aaPredicted RBP30.13■■■□□ 2.41
CSPG4P13-201ENST00000565545 ASXL2Q76L83 1435 aa30.13■■■□□ 2.41
CSPG4P13-201ENST00000565545 PLB1Q6P1J6 1458 aa30.11■■■□□ 2.41
CSPG4P13-201ENST00000565545 UACAQ9BZF9 1416 aa30.08■■■□□ 2.41
CSPG4P13-201ENST00000565545 UHRF1BP1LA0JNW5 1464 aa30.06■■■□□ 2.4
CSPG4P13-201ENST00000565545 SAMD9Q5K651 1589 aa30.05■■■□□ 2.4
CSPG4P13-201ENST00000565545 VPS8Q8N3P4 1428 aa30.05■■■□□ 2.4
CSPG4P13-201ENST00000565545 UGGT2Q9NYU1 1516 aa30.04■■■□□ 2.4
CSPG4P13-201ENST00000565545 DISP1Q96F81 1524 aa30.01■■■□□ 2.4
CSPG4P13-201ENST00000565545 GLI2P10070 1586 aa29.98■■■□□ 2.39
CSPG4P13-201ENST00000565545 KDM5BQ9UGL1 1544 aa29.91■■■□□ 2.38
CSPG4P13-201ENST00000565545 EPRSP07814 1512 aaKnown RBP29.9■■■□□ 2.38
CSPG4P13-201ENST00000565545 FHOD3Q2V2M9 1422 aa29.88■■■□□ 2.37
CSPG4P13-201ENST00000565545 P3H3Q8IVL6 736 aa29.86■■■□□ 2.37
CSPG4P13-201ENST00000565545 FMN1Q68DA7 1419 aa29.86■■■□□ 2.37
CSPG4P13-201ENST00000565545 PPRC1Q5VV67 1664 aaKnown RBP29.85■■■□□ 2.37
CSPG4P13-201ENST00000565545 KIAA0556O60303 1618 aa29.85■■■□□ 2.37
CSPG4P13-201ENST00000565545 TEX14Q8IWB6 1497 aa29.83■■■□□ 2.37
CSPG4P13-201ENST00000565545 COL17A1Q9UMD9 1497 aaPredicted RBP29.82■■■□□ 2.36
CSPG4P13-201ENST00000565545 ZCCHC11Q5TAX3 1644 aaKnown RBP29.8■■■□□ 2.36
CSPG4P13-201ENST00000565545 ADGRL1O94910 1474 aa29.79■■■□□ 2.36
CSPG4P13-201ENST00000565545 KCNH8Q96L42 1107 aa29.77■■■□□ 2.36
CSPG4P13-201ENST00000565545 MAP3K4Q9Y6R4 1608 aa29.77■■■□□ 2.36
CSPG4P13-201ENST00000565545 APLP2Q06481 763 aa29.76■■■□□ 2.35
CSPG4P13-201ENST00000565545 WDR7Q9Y4E6 1490 aa29.75■■■□□ 2.35
CSPG4P13-201ENST00000565545 CASKIN1Q8WXD9 1431 aa29.74■■■□□ 2.35
CSPG4P13-201ENST00000565545 FYCO1Q9BQS8 1478 aa29.72■■■□□ 2.35
CSPG4P13-201ENST00000565545 PCF11O94913 1555 aaKnown RBP29.7■■■□□ 2.35
CSPG4P13-201ENST00000565545 MAP3K1Q13233 1512 aa29.68■■■□□ 2.34
CSPG4P13-201ENST00000565545 CD109Q6YHK3 1445 aa29.66■■■□□ 2.34
CSPG4P13-201ENST00000565545 ARID3CA6NKF2 412 aa29.6■■■□□ 2.33
CSPG4P13-201ENST00000565545 ABCA8O94911 1581 aa29.6■■■□□ 2.33
CSPG4P13-201ENST00000565545 MAGI3Q5TCQ9 1506 aa29.58■■■□□ 2.33
CSPG4P13-201ENST00000565545 ILDR1Q86SU0 546 aaPredicted RBP29.58■■■□□ 2.33
CSPG4P13-201ENST00000565545 HECW1Q76N89 1606 aa29.57■■■□□ 2.32
CSPG4P13-201ENST00000565545 TIAM1Q13009 1591 aa29.57■■■□□ 2.32
CSPG4P13-201ENST00000565545 CFAP43Q8NDM7 1665 aa29.56■■■□□ 2.32
CSPG4P13-201ENST00000565545 RAPGEF6Q8TEU7 1601 aa29.53■■■□□ 2.32
CSPG4P13-201ENST00000565545 ATP1B4Q9UN42 357 aaPredicted RBP29.52■■■□□ 2.32
CSPG4P13-201ENST00000565545 CCDC18Q5T9S5 1454 aa29.51■■■□□ 2.31
CSPG4P13-201ENST00000565545 PPARGC1BQ86YN6 1023 aaKnown RBP29.49■■■□□ 2.31
CSPG4P13-201ENST00000565545 LRRIQ1Q96JM4 1722 aa29.46■■■□□ 2.31
CSPG4P13-201ENST00000565545 TRIM26Q12899 539 aaPredicted RBP29.46■■■□□ 2.31
CSPG4P13-201ENST00000565545 ATP10BO94823 1461 aa29.43■■■□□ 2.3
CSPG4P13-201ENST00000565545 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.43■■■□□ 2.3
CSPG4P13-201ENST00000565545 HNRNPUL2Q1KMD3 747 aaKnown RBP29.43■■■□□ 2.3
CSPG4P13-201ENST00000565545 LRRC9Q6ZRR7 1453 aa29.42■■■□□ 2.3
CSPG4P13-201ENST00000565545 HECW2Q9P2P5 1572 aa29.42■■■□□ 2.3
CSPG4P13-201ENST00000565545 KANK4Q5T7N3 995 aaPredicted RBP29.41■■■□□ 2.3
CSPG4P13-201ENST00000565545 NUP153P49790 1475 aaKnown RBP29.41■■■□□ 2.3
CSPG4P13-201ENST00000565545 ARAP3Q8WWN8 1544 aa29.35■■■□□ 2.29
CSPG4P13-201ENST00000565545 PHLDB1Q86UU1 1377 aa29.33■■■□□ 2.29
CSPG4P13-201ENST00000565545 RAPGEF3O95398 923 aa29.3■■■□□ 2.28
CSPG4P13-201ENST00000565545 EHBP1L1Q8N3D4 1523 aa29.3■■■□□ 2.28
CSPG4P13-201ENST00000565545 CDK13Q14004 1512 aaKnown RBP29.29■■■□□ 2.28
CSPG4P13-201ENST00000565545 MTUS2Q5JR59 1369 aa29.28■■■□□ 2.28
CSPG4P13-201ENST00000565545 CDK11AQ9UQ88 783 aaPredicted RBP29.27■■■□□ 2.28
CSPG4P13-201ENST00000565545 ABCA9Q8IUA7 1624 aa29.23■■■□□ 2.27
CSPG4P13-201ENST00000565545 PCGF6Q9BYE7 350 aa29.22■■■□□ 2.27
CSPG4P13-201ENST00000565545 ARID4BQ4LE39 1312 aaPredicted RBP29.21■■■□□ 2.27
CSPG4P13-201ENST00000565545 SUPT6HQ7KZ85 1726 aaKnown RBP29.2■■■□□ 2.27
CSPG4P13-201ENST00000565545 PLEKHD1A6NEE1 506 aa29.2■■■□□ 2.26
CSPG4P13-201ENST00000565545 NEO1Q92859 1461 aa29.2■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 1471.3 ms