RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 PRG4Q92954 1404 aaPredicted RBP34.44■■■■□ 3.1
CLN6-206ENST00000565471 JPH4Q96JJ6 628 aa34.43■■■■□ 3.1
CLN6-206ENST00000565471 KIAA0586Q9BVV6 1533 aa34.34■■■■□ 3.09
CLN6-206ENST00000565471 CARMIL1Q5VZK9 1371 aa34.3■■■■□ 3.08
CLN6-206ENST00000565471 RAPGEF2Q9Y4G8 1499 aa34.05■■■■□ 3.04
CLN6-206ENST00000565471 IQGAP2Q13576 1575 aa34.05■■■■□ 3.04
CLN6-206ENST00000565471 ADCY10Q96PN6 1610 aa34.01■■■■□ 3.04
CLN6-206ENST00000565471 CARMIL2Q6F5E8 1435 aa33.98■■■■□ 3.03
CLN6-206ENST00000565471 NPM1P06748 294 aaKnown RBP eCLIP33.97■■■■□ 3.03
CLN6-206ENST00000565471 MAPKBP1O60336 1514 aa33.95■■■■□ 3.03
CLN6-206ENST00000565471 KIF13AQ9H1H9 1805 aa33.94■■■■□ 3.02
CLN6-206ENST00000565471 PTPRGP23470 1445 aa33.94■■■■□ 3.02
CLN6-206ENST00000565471 TNIKQ9UKE5 1360 aa33.92■■■■□ 3.02
CLN6-206ENST00000565471 ABCC10Q5T3U5 1492 aa33.87■■■■□ 3.01
CLN6-206ENST00000565471 UGGT2Q9NYU1 1516 aa33.86■■■■□ 3.01
CLN6-206ENST00000565471 DISP1Q96F81 1524 aa33.85■■■■□ 3.01
CLN6-206ENST00000565471 DIP2BQ9P265 1576 aa33.79■■■■□ 3
CLN6-206ENST00000565471 PRXQ9BXM0 1461 aa33.78■■■■□ 3
CLN6-206ENST00000565471 FAM69CQ0P6D2 419 aa33.76■■■□□ 2.99
CLN6-206ENST00000565471 CTTNBP2Q8WZ74 1663 aa33.76■■■□□ 2.99
CLN6-206ENST00000565471 TTBK1Q5TCY1 1321 aaPredicted RBP33.76■■■□□ 2.99
CLN6-206ENST00000565471 ABCC2Q92887 1545 aa33.75■■■□□ 2.99
CLN6-206ENST00000565471 UHRF1BP1LA0JNW5 1464 aa33.75■■■□□ 2.99
CLN6-206ENST00000565471 KIAA0556O60303 1618 aa33.74■■■□□ 2.99
CLN6-206ENST00000565471 UACAQ9BZF9 1416 aa33.7■■■□□ 2.99
CLN6-206ENST00000565471 GOLGA3Q08378 1498 aa33.62■■■□□ 2.97
CLN6-206ENST00000565471 PLB1Q6P1J6 1458 aa33.59■■■□□ 2.97
CLN6-206ENST00000565471 KDM5BQ9UGL1 1544 aa33.58■■■□□ 2.97
CLN6-206ENST00000565471 ASXL2Q76L83 1435 aa33.57■■■□□ 2.96
CLN6-206ENST00000565471 CSRNP3Q8WYN3 585 aa33.55■■■□□ 2.96
CLN6-206ENST00000565471 EEA1Q15075 1411 aa33.53■■■□□ 2.96
CLN6-206ENST00000565471 GLI2P10070 1586 aa33.5■■■□□ 2.95
CLN6-206ENST00000565471 ZCCHC11Q5TAX3 1644 aaKnown RBP33.48■■■□□ 2.95
CLN6-206ENST00000565471 TSPOAP1O95153 1857 aa33.47■■■□□ 2.95
CLN6-206ENST00000565471 ABCA8O94911 1581 aa33.42■■■□□ 2.94
CLN6-206ENST00000565471 KDM6BO15054 1643 aa33.4■■■□□ 2.94
CLN6-206ENST00000565471 EPRSP07814 1512 aaKnown RBP33.39■■■□□ 2.94
CLN6-206ENST00000565471 PPRC1Q5VV67 1664 aaKnown RBP33.34■■■□□ 2.93
CLN6-206ENST00000565471 WDR7Q9Y4E6 1490 aa33.31■■■□□ 2.92
CLN6-206ENST00000565471 AEBP2Q6ZN18 517 aaPredicted RBP33.31■■■□□ 2.92
CLN6-206ENST00000565471 MAP3K4Q9Y6R4 1608 aa33.31■■■□□ 2.92
CLN6-206ENST00000565471 SAMD9Q5K651 1589 aa33.3■■■□□ 2.92
CLN6-206ENST00000565471 FAM9AQ8IZU1 332 aaPredicted RBP33.27■■■□□ 2.92
CLN6-206ENST00000565471 P3H3Q8IVL6 736 aa33.23■■■□□ 2.91
CLN6-206ENST00000565471 KIF21BO75037 1637 aa33.23■■■□□ 2.91
CLN6-206ENST00000565471 TEX14Q8IWB6 1497 aa33.2■■■□□ 2.91
CLN6-206ENST00000565471 CHIC1Q5VXU3 224 aa33.16■■■□□ 2.9
CLN6-206ENST00000565471 ATP10BO94823 1461 aa33.12■■■□□ 2.89
CLN6-206ENST00000565471 CFAP43Q8NDM7 1665 aa33.11■■■□□ 2.89
CLN6-206ENST00000565471 RAPGEF6Q8TEU7 1601 aa33.1■■■□□ 2.89
CLN6-206ENST00000565471 KCNH8Q96L42 1107 aa33.07■■■□□ 2.88
CLN6-206ENST00000565471 MAGI3Q5TCQ9 1506 aa33.07■■■□□ 2.88
CLN6-206ENST00000565471 COL17A1Q9UMD9 1497 aaPredicted RBP33.06■■■□□ 2.88
CLN6-206ENST00000565471 CD109Q6YHK3 1445 aa33.06■■■□□ 2.88
CLN6-206ENST00000565471 EFCAB5A4FU69 1503 aa33.05■■■□□ 2.88
CLN6-206ENST00000565471 FHOD3Q2V2M9 1422 aa33.03■■■□□ 2.88
CLN6-206ENST00000565471 ARID3CA6NKF2 412 aa33.02■■■□□ 2.88
CLN6-206ENST00000565471 RANGAP1P46060 587 aaPredicted RBP33.02■■■□□ 2.88
CLN6-206ENST00000565471 NUP153P49790 1475 aaKnown RBP32.98■■■□□ 2.87
CLN6-206ENST00000565471 ABCA9Q8IUA7 1624 aa32.91■■■□□ 2.86
CLN6-206ENST00000565471 KDM4FA0A1W2PPD8 638 aa32.9■■■□□ 2.86
CLN6-206ENST00000565471 UBTFP17480 764 aaKnown RBP32.88■■■□□ 2.85
CLN6-206ENST00000565471 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.87■■■□□ 2.85
CLN6-206ENST00000565471 HNRNPUL2Q1KMD3 747 aaKnown RBP32.87■■■□□ 2.85
CLN6-206ENST00000565471 EHMT2Q96KQ7 1210 aa32.8■■■□□ 2.84
CLN6-206ENST00000565471 ARAP3Q8WWN8 1544 aa32.8■■■□□ 2.84
CLN6-206ENST00000565471 PHLDB1Q86UU1 1377 aa32.79■■■□□ 2.84
CLN6-206ENST00000565471 ARHGAP35Q9NRY4 1499 aa32.75■■■□□ 2.83
CLN6-206ENST00000565471 PLEKHD1A6NEE1 506 aa32.75■■■□□ 2.83
CLN6-206ENST00000565471 ADGRL1O94910 1474 aa32.74■■■□□ 2.83
CLN6-206ENST00000565471 FMN1Q68DA7 1419 aa32.74■■■□□ 2.83
CLN6-206ENST00000565471 NEO1Q92859 1461 aa32.73■■■□□ 2.83
CLN6-206ENST00000565471 CDK13Q14004 1512 aaKnown RBP32.66■■■□□ 2.82
CLN6-206ENST00000565471 HECW1Q76N89 1606 aa32.65■■■□□ 2.82
CLN6-206ENST00000565471 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.62■■■□□ 2.812e-6■■■■□ 19.9
CLN6-206ENST00000565471 TTC37Q6PGP7 1564 aa32.57■■■□□ 2.8
CLN6-206ENST00000565471 CFAP74Q9C0B2 1584 aa32.54■■■□□ 2.8
CLN6-206ENST00000565471 RAPGEF3O95398 923 aa32.53■■■□□ 2.8
CLN6-206ENST00000565471 FRMPD1Q5SYB0 1578 aa32.53■■■□□ 2.8
CLN6-206ENST00000565471 ATP1B4Q9UN42 357 aaPredicted RBP32.52■■■□□ 2.8
CLN6-206ENST00000565471 FANCAO15360 1455 aa32.52■■■□□ 2.8
CLN6-206ENST00000565471 AKNAQ7Z591 1439 aa32.5■■■□□ 2.79
CLN6-206ENST00000565471 CDK11AQ9UQ88 783 aaPredicted RBP32.49■■■□□ 2.79
CLN6-206ENST00000565471 DENND4BO75064 1496 aaPredicted RBP32.47■■■□□ 2.79
CLN6-206ENST00000565471 PLCH2O75038 1416 aa32.43■■■□□ 2.78
CLN6-206ENST00000565471 RICTORQ6R327 1708 aa32.43■■■□□ 2.78
CLN6-206ENST00000565471 LRRIQ1Q96JM4 1722 aa32.42■■■□□ 2.78
CLN6-206ENST00000565471 TROQ12816 1431 aaPredicted RBP32.41■■■□□ 2.78
CLN6-206ENST00000565471 CASKIN1Q8WXD9 1431 aa32.41■■■□□ 2.78
CLN6-206ENST00000565471 KIF14Q15058 1648 aa32.39■■■□□ 2.78
CLN6-206ENST00000565471 PCF11O94913 1555 aaKnown RBP32.38■■■□□ 2.77
CLN6-206ENST00000565471 MYO5CQ9NQX4 1742 aa32.37■■■□□ 2.77
CLN6-206ENST00000565471 CLIP1P30622 1438 aa32.36■■■□□ 2.77
CLN6-206ENST00000565471 ARHGEF40Q8TER5 1519 aa32.36■■■□□ 2.77
CLN6-206ENST00000565471 CCDC18Q5T9S5 1454 aa32.35■■■□□ 2.77
CLN6-206ENST00000565471 ZMYM4Q5VZL5 1548 aa32.35■■■□□ 2.77
CLN6-206ENST00000565471 ADAMTSL3P82987 1691 aa32.3■■■□□ 2.76
CLN6-206ENST00000565471 FYCO1Q9BQS8 1478 aa32.29■■■□□ 2.76
CLN6-206ENST00000565471 EFCAB2Q5VUJ9 269 aa32.29■■■□□ 2.76
CLN6-206ENST00000565471 SCAPERQ9BY12 1400 aa32.28■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms